[BACK]Return to ChangeLog CVS log [TXT] [DIR] Up to [Local Repository] / imach / src

Diff for /imach/src/ChangeLog between versions 1.45 and 1.67

version 1.45, 2021/03/31 14:11:04 version 1.67, 2023/05/23 12:25:36
Line 1 Line 1
 2021-03-31  Nicolas Brouard   <brouard@ined.fr>  2023-05-23  Nicolas Brouard   <brouard@ined.fr>
   
         * imach.c (Module): Still bugs in the result loop. Thank to Holly Benett          * imach.c (Module): Fixed PROB_r 
   
 2021-03-08  Nicolas Brouard   <brouard@ined.fr>  2023-05-22  Nicolas Brouard   <brouard@ined.fr>
   
         * ./ (Module): Fixed bug on result:          * imach.c (Module): In the ILK....txt file, the number of columns
           before the covariates values is dependent of the number of states (16+nlstate): 0.99r46
 2021-02-20  Nicolas Brouard   <brouard@ined.fr>  
   2023-05-08  Nicolas Brouard   <brouard@ined.fr>
         * imach.c (Module): Fix bug on quitting after result lines!  
         (Module): Version 0.99r21          *  (Module): Error V0 when result:. and model 1+age+V1: fixed
   
 2021-02-12  Nicolas Brouard   <brouard@ined.fr>  2023-04-29  Nicolas Brouard  <brouard@ined.fr>
   
         * imach.c (Module): The use of a Windows BOM (huge) file is now an error          * imach.c (Module): Inverting the model equation and fixingg bugs
           in the drawings
           "1+age+V7*V4*age+V6*V4*age+V7*V3*age+V6*V3*age+V6*V2*age+V7*age+V6*age+V4*age+V3*age+V2*age+V7*V4+V6*V4+V7*V3+V6*V3+V7*V2+V6*V2+V7+V6+V4+V3+V2\000\0003+V2"
 2021-02-11  Nicolas  Brouard   <brouard@ined.fr>  
   2023-04-24  Nicolas Brouard  <brouard@ined.fr>
         *  (Module): imach.c Someone entered 'results:' instead of 'result:'. Now it is an error which is printed.  
           * imach.c (Module): some bugs in printinggnuplot 
 2020-02-22  Brouard Nicolas  <brouard@ined.fr>  
   2022-09-19  Nicolas Brouard   <brouard@ined.fr>
         *  (Module): imach.c Update mle=-3 (for computing Life expectancy  
         and life table from the data without any state)          * imach.c (Module): Version 0.99r42 needed a newer version of
           Gnuplot. But newer version 0.99r43 should run with the Gnuplot
 2019-05-20  Brouard Nicolas  <brouard@ined.fr>          version 5.0 or 5.1 distributed with IMaCh.
   
         * version.h: Summary: version 0.99.r19  2022-09-18  Nicolas Brouard   <brouard@ined.fr>
   
         * imach.c: Summary: Projection syntax simplified          * imach.c (Module): Fixing when a state in the data is 0 or higher
         We can now start projections, forward or backward, from the mean date          than lstate+ndeath. Fixing the plot of contribution to Likelihood.
         of inteviews up to or down to a number of years of projection:  
         prevforecast=1 yearsfproj=15.3 mobil_average=0  2022-09-16  Nicolas Brouard   <brouard@ined.fr>
         or  
         prevforecast=1 starting-proj-date=1/1/2007 final-proj-date=12/31/2017 mobil_average=0          * imach.c (Module): 0.99r41 Was an error when product of timevarying and fixed. Using FixedV[of name] now. Thank you  Feinuo
         or  
         prevbackcast=1 yearsbproj=12.3 mobil_average=1  2022-09-14  Nicolas Brouard   <brouard@ined.fr>
         or  
         prevbackcast=1 starting-back-date=1/10/1999 final-back-date=1/1/1985 mobil_average=1          * imach.c (Module): Fixing names of variables in T_ (thanks to Feinuo)
   
 2019-05-18  Brouard Nicolas  <brouard@ined.fr>  2022-09-14  Nicolas Brouard   <brouard@ined.fr>
   
         * imach.c: Summary: doxygen tex bug          * imach.c (Module): Version 0.99r39 with colored dummy covariates
           (fixed or time varying), using new last columns of
 2019-05-16  Brouard Nicolas  <brouard@ined.fr>          ILK_parameter.txt file.
   
         * imach.c: Summary: There was some wrong lines added  2022-09-11  Nicolas Brouard   <brouard@ined.fr>
   
 2019-05-09  Brouard Nicolas  <brouard@ined.fr>          * imach.c (Module): Adding timevarying products of any kinds,
           should work before shifting cotvar from ncovcol+nqv columns in
         * Makefile, imach.c: *** empty log message ***          order to have a correspondance between the column of cotvar and
           the id of column.
         * ChangeLog: Summary: C=          (Module): Some cleaning and adding covariates in ILK.txt
   
         * imach.c: Summary: Some updates  2022-09-09  Nicolas Brouard   <brouard@ined.fr>
   
         * imach.c: Summary: Before ncovmax          * imach.c (Module): Many improvements for fixing products of fixed
           timevarying as well as fixed * fixed, and test with quantitative
         * version.h: *** empty log message ***          covariate.
   
         * imach.c: Summary: 0.99r18 unlimited number of individuals  2022-09-04  Nicolas Brouard   <brouard@ined.fr>
         The number n which was limited to 20,000 cases is now unlimited, from firstobs to lastobs. If the number is too for the virtual memory, probably an error will occur.  
           * imach.c (Module): Now the easy runs i.e. without result or
 2018-12-13  Brouard Nicolas  <brouard@ined.fr>          model=1+age only did not work. The defautl combination should be 1
           and not 0 because everything hasn't been tranformed yet.
         * imach.c: Summary: Bug for young ages (<-30) will be in r17  
   2022-09-02  Nicolas Brouard   <brouard@ined.fr>
 2018-12-05  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c: Version 0.99r35 because it outputs same results with
         * Makefile: Summary: 0.99r16          1+age+V1+V1*age for females and 1+age for females only
           (education=1 noweight)
 2018-05-02  Brouard Nicolas  <brouard@ined.fr>  
   2022-08-31  Nicolas Brouard   <brouard@ined.fr>
         * imach.c: Summary: Some bugs fixed  
           * imach.c (Module): Some improvments in fichtm and many verifications 0.99r34
 2018-05-02  Brouard Nicolas  <brouard@ined.fr>  
   2022-08-21  Nicolas Brouard   <brouard@ined.fr>
         * imach.c:  Summary: Bug for young ages (<-30) will be in r17  
           * imach.c (Module): Version 0.99r33 A lot of changes in
 2018-05-02  Brouard Nicolas  <brouard@ined.fr>          reassigning covariates: my first idea was that people will always
           use the first covariate V1 into the model but in fact they are
         * imach.c: Summary: Some bugs fixed          producing data with many covariates and can use an equation model
           with some of the covariate; it means that in a model V2+V3 instead
 2018-05-01  Brouard Nicolas  <brouard@ined.fr>          of codtabm(k,Tvaraff[j]) which calculates for combination k, for
           three covariates (V1, V2, V3) the value of Tvaraff[j], but in fact
         * imach.c:          the equation model is restricted to two variables only (V2, V3)
         Summary: Bug fixed by providing frequencies only for non missing covariates          and the combination for V2 should be codtabm(k,1) instead of
           (codtabm(k,2), and the code should be
 2018-04-27  Brouard Nicolas  <brouard@ined.fr>          codtabm(k,TnsdVar[Tvaraff[j]]. Many many changes have been
           made. All of these should be simplified once a day like we did in
         * imach.c: Summary: some minor bugs          hpxij() for example by using precov[nres] which is computed in
           decoderesult for each nres of each resultline. Loop should be done
 2018-04-21  Brouard Nicolas  <brouard@ined.fr>          on the equation model globally by distinguishing only product with
           age (which are changing with age) and no more on type of
         * README.txt: *** empty log message ***          covariates, single dummies, single covariates. 
   
         * imach.c: Summary: Some bugs fixed, valgrind tested  2022-08-06  Nicolas Brouard   <brouard@ined.fr>
   
 2018-04-20  Brouard Nicolas  <brouard@ined.fr>          *  imach.c (Module): Version of imach using partly decoderesult to rebuild xpxij function
   
         * Makefile, README.txt, setup.iss: Summary: imach 0.99r16  2022-08-03  Nicolas Brouard   <brouard@ined.fr>
   
         * imach.c:          *  imach.c (Module): Many errors in graphs fixed with Vn*age covariates.
         Summary: Computing mean and stdeviation of fixed quantitative variables  
   2022-07-25  Brouard Nicolas  <brouard@brouard.name>
 2018-04-19  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c (Module): Error cptcovn instead of nsd in bmij (was
         * imach.c: Summary: Some minor bugs fixed          coredumped, revealed by Feiuno, thank you.
   
         * version.h: *** empty log message ***  2022-07-23  Nicolas Brouard   <brouard@ined.fr>
   
 2018-02-27  Brouard Nicolas  <brouard@ined.fr>          * r29 W and not sqrt(Wald)
   
         * imach.c: *** empty log message ***  2022-07-22  Nicolas Brouard   <brouard@ined.fr>
   
         * imach.c: Summary: Adding second argument for quitting          *  imach.c (Module): Output of Wald test in the htm file and not only in the log. 
   
 2018-02-21  Brouard Nicolas  <brouard@ined.fr>  2022-06-02  Brouard Nicolas  <brouard@brouard.name>
   
         * Makefile, README.txt, imach.c: Summary: 0.99r15          * imach.c (Module): Adding the Wald tests from the log to the main
         New Makefile with recent VirtualBox 5.26. Bug in sqrt negatve in imach.c          htm for better display of the maximum likelihood estimators.
   
 2017-07-20  Brouard Nicolas  <brouard@ined.fr>  2022-05-30  Brouard Nicolas  <brouard@brouard.name>
   
         * imach.c: Summary: temporary working          * imach.c: With products of covariates (age or dummies or
           quantitatives), estimates of parameters were good but when
 2017-07-19  Brouard Nicolas  <brouard@ined.fr>          estimating variances the positions of newly created covariates
           were wrongly assigned and results were wrong. Thank to Feinua_Sun!
         * imach.c: Summary: Bug for mobil_average=0 and prevforecast fixed(?)  
   2022-05-24  Nicolas Brouard   <brouard@ined.fr>
 2017-07-17  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c (Module): Some attempts to find a bug of wrong estimates
         * imach.c: Summary: BOM files can be read now          of confidencce intervals with product in the equation modelC
   
 2017-06-30  Brouard Nicolas  <brouard@ined.fr>  2022-05-15  Nicolas Brouard   <brouard@ined.fr>
   
         * imach.c: Summary: Graphs improvements          * imach.c (Module):  Some minor improvements
   
         * imach.c: Summary: Saito's color  2022-04-13  Brouard Nicolas  <brouard@brouard.name>
   
 2017-06-29  Brouard Nicolas  <brouard@ined.fr>          * imach.c (Module): Adding link to text data files
   
         * imach.c: Summary: Version 0.99r14  2022-04-11  Nicolas Brouard   <brouard@ined.fr>
   
 2017-06-27  Brouard Nicolas  <brouard@ined.fr>          * imach.c (Module): Error in rewriting the 'r' file with yearsfproj or yearsbproj fixed
   
         * imach.c: Summary: More documentation on projections  2022-04-05  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c: Summary: Color of backprojection changed from 6 to 5(yellow)          * imach.c (Module): Fixed covariates (dummy or quantitative)
           with missing values have never been allowed but are ERRORS and
         * imach.c: Summary: Some bug with rint          program quits. Standard deviations of fixed covariates were
           wrongly computed. Mean and standard deviations of time varying
 2017-05-24  Brouard Nicolas  <brouard@ined.fr>          covariates are still not computed.
   
         * imach.c: *** empty log message ***  2022-03-17  Brouard Nicolas  <brouard@ined.fr>
   
 2017-05-23  Brouard Nicolas  <brouard@ined.fr>          * 99r25 Improvements in fixing discrepancies between covariates
           missing in result line but in model. 
         * imach.c: Summary: Code into subroutine, cleanings  
   *Wed Mar 31 2021  Nicolas Brouard   <brouard@ined.fr>
 2017-05-18  Brouard Nicolas  <brouard@ined.fr>          * imach.c (Module): Still bugs in the result loop. Thank to Holly Benett
   
         * imach.c:  *2021-03-08  Nicolas Brouard   <brouard@ined.fr>
         Summary: backprojection and confidence intervals of backprevalence  
           * ./ (Module): Fixed bug on result:
 2017-05-13  Brouard Nicolas  <brouard@ined.fr>  
   *2021-02-20  Nicolas Brouard   <brouard@ined.fr>
         * imach.c: Summary: temporary save for backprojection  
           * imach.c (Module): Fix bug on quitting after result lines!
         * imach.c: Summary: Version 0.99r13 (improvements and bugs fixed)          (Module): Version 0.99r21
   
 2017-04-26  Brouard Nicolas  <brouard@ined.fr>  2021-02-12  Nicolas Brouard   <brouard@ined.fr>
   
         * imach.c: Summary: imach 0.99r13 Some bugs fixed          * imach.c (Module): The use of a Windows BOM (huge) file is now an error
   
         * imach.c: Summary: Labels in graphs  
   2021-02-11  Nicolas  Brouard   <brouard@ined.fr>
 2017-04-24  Brouard Nicolas  <brouard@ined.fr>  
           *  (Module): imach.c Someone entered 'results:' instead of 'result:'. Now it is an error which is printed.
         * imach.c: Summary: to save  
   2020-02-22  Brouard Nicolas  <brouard@ined.fr>
 2017-04-18  Brouard Nicolas  <brouard@ined.fr>  
           *  (Module): imach.c Update mle=-3 (for computing Life expectancy
         * imach.c: *** empty log message ***          and life table from the data without any state)
   
 2017-04-05  Brouard Nicolas  <brouard@ined.fr>  2019-05-20  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c: Summary: Bug in E_ as well as in T_ fixed nres-1 vs k1-1          * version.h: Summary: version 0.99.r19
   
 2017-04-04  Brouard Nicolas  <brouard@ined.fr>          * imach.c: Summary: Projection syntax simplified
           We can now start projections, forward or backward, from the mean date
         * imach.c: Summary: Gnuplot indexations fixed (humm)          of inteviews up to or down to a number of years of projection:
           prevforecast=1 yearsfproj=15.3 mobil_average=0
         * imach.c:          or
         Summary: Some errors to warnings only if date of death is unknown but status is death we could set to pi3          prevforecast=1 starting-proj-date=1/1/2007 final-proj-date=12/31/2017 mobil_average=0
           or
 2017-04-03  Brouard Nicolas  <brouard@ined.fr>          prevbackcast=1 yearsbproj=12.3 mobil_average=1
           or
         * imach.c: Summary: Version 0.99r12          prevbackcast=1 starting-back-date=1/10/1999 final-back-date=1/1/1985 mobil_average=1
         Some cleanings, conformed with updated documentation.  
   2019-05-18  Brouard Nicolas  <brouard@ined.fr>
 2017-03-30  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c: Summary: doxygen tex bug
         * version.h: *** empty log message ***  
   2019-05-16  Brouard Nicolas  <brouard@ined.fr>
         * version.h: Summary:0.99r11  
           * imach.c: Summary: There was some wrong lines added
 2017-03-29  Brouard Nicolas  <brouard@ined.fr>  
   2019-05-09  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: Summary: Temp  
           * Makefile, imach.c: *** empty log message ***
 2017-03-27  Brouard Nicolas  <brouard@ined.fr>  
           * ChangeLog: Summary: C=
         * imach.c: Summary: Temporary  
           * imach.c: Summary: Some updates
 2017-03-08  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c: Summary: Before ncovmax
         * imach.c: Summary: IMaCh version 0.99r10 bugs in gnuplot fixed  
           * version.h: *** empty log message ***
         * imach.c: Summary: Fixing data parameter line  
           * imach.c: Summary: 0.99r18 unlimited number of individuals
 2016-12-15  Brouard Nicolas  <brouard@ined.fr>          The number n which was limited to 20,000 cases is now unlimited, from firstobs to lastobs. If the number is too for the virtual memory, probably an error will occur.
   
         * imach.c: Summary: 0.99 in progress  2018-12-13  Brouard Nicolas  <brouard@ined.fr>
   
 2016-09-15  Brouard Nicolas  <brouard@ined.fr>          * imach.c: Summary: Bug for young ages (<-30) will be in r17
   
         * imach.c: *** empty log message ***  2018-12-05  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c: Summary: not working          * Makefile: Summary: 0.99r16
   
 2016-09-08  Brouard Nicolas  <brouard@ined.fr>  2018-05-02  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c: Summary: continue          * imach.c: Summary: Some bugs fixed
   
 2016-09-07  Brouard Nicolas  <brouard@ined.fr>  2018-05-02  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c: Summary: Starting values from frequencies          * imach.c:  Summary: Bug for young ages (<-30) will be in r17
   
         * imach.c: *** empty log message ***  2018-05-02  Brouard Nicolas  <brouard@ined.fr>
   
 2016-09-02  Brouard Nicolas  <brouard@ined.fr>          * imach.c: Summary: Some bugs fixed
   
         * imach.c: *** empty log message ***  2018-05-01  Brouard Nicolas  <brouard@ined.fr>
   
 2016-08-30  Brouard Nicolas  <brouard@ined.fr>          * imach.c:
           Summary: Bug fixed by providing frequencies only for non missing covariates
         * imach.c: Summary: Fixing a lots  
   2018-04-27  Brouard Nicolas  <brouard@ined.fr>
 2016-08-29  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c: Summary: some minor bugs
         * imach.c: Summary: gnuplot problem in Back projection to fix  
   2018-04-21  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: Summary: Better  
           * README.txt: *** empty log message ***
 2016-08-26  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c: Summary: Some bugs fixed, valgrind tested
         * imach.c:  
         Summary: Improvement in Powell output in order to copy and paste  2018-04-20  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c: Summary: Starting tests of 0.99          * Makefile, README.txt, setup.iss: Summary: imach 0.99r16
   
         * imach.c: Summary: to valgrind          * imach.c:
           Summary: Computing mean and stdeviation of fixed quantitative variables
 2016-08-25  Brouard Nicolas  <brouard@ined.fr>  
   2018-04-19  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: *** empty log message ***  
           * imach.c: Summary: Some minor bugs fixed
 2016-08-23  Brouard Nicolas  <brouard@ined.fr>  
           * version.h: *** empty log message ***
         * imach.c: *** empty log message ***  
   2018-02-27  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: Summary: not working  
           * imach.c: *** empty log message ***
 2016-08-22  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c: Summary: Adding second argument for quitting
         * imach.c: Summary: not working  
   2018-02-21  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: Summary: Not working  
           * Makefile, README.txt, imach.c: Summary: 0.99r15
 2016-07-23  Brouard Nicolas  <brouard@ined.fr>          New Makefile with recent VirtualBox 5.26. Bug in sqrt negatve in imach.c
   
         * imach.c: Summary: Completing for func too  2017-07-20  Brouard Nicolas  <brouard@ined.fr>
   
 2016-07-22  Brouard Nicolas  <brouard@ined.fr>          * imach.c: Summary: temporary working
   
         * imach.c: Summary: Fixing some arrays, still debugging  2017-07-19  Brouard Nicolas  <brouard@ined.fr>
   
 2016-07-21  Brouard Nicolas  <brouard@ined.fr>          * imach.c: Summary: Bug for mobil_average=0 and prevforecast fixed(?)
   
         * imach.c:  2017-07-17  Brouard Nicolas  <brouard@ined.fr>
         Summary: 0.99 working (more or less) for Asian Workshop on multitate methods  
           * imach.c: Summary: BOM files can be read now
 2016-07-12  Brouard Nicolas  <brouard@ined.fr>  
   2017-06-30  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: Summary: temp  
           * imach.c: Summary: Graphs improvements
         * imach.c: Summary: saving but not running  
           * imach.c: Summary: Saito's color
 2016-07-01  Brouard Nicolas  <brouard@ined.fr>  
   2017-06-29  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: Summary: Fixes  
           * imach.c: Summary: Version 0.99r14
 2016-02-19  Brouard Nicolas  <brouard@ined.fr>  
   2017-06-27  Brouard Nicolas  <brouard@ined.fr>
         * imach-0.98r.c: Summary: Kind of 0.98r? series, starting with r7  
           * imach.c: Summary: More documentation on projections
         * setup.iss, Makefile, version.h: *** empty log message ***  
           * imach.c: Summary: Color of backprojection changed from 6 to 5(yellow)
         * imach.c: Summary: temporary  
           * imach.c: Summary: Some bug with rint
 2016-02-17  Brouard Nicolas  <brouard@ined.fr>  
   2017-05-24  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: Summary: Probably last 0.98 stable version 0.98r6  
           * imach.c: *** empty log message ***
 2016-02-16  Brouard Nicolas  <brouard@ined.fr>  
   2017-05-23  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: Summary: minor bug  
           * imach.c: Summary: Code into subroutine, cleanings
         * imach.c: Summary: 0.99r2  
   2017-05-18  Brouard Nicolas  <brouard@ined.fr>
 2016-02-15  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c:
         * imach.c: *** empty log message ***          Summary: backprojection and confidence intervals of backprevalence
   
 2016-02-12  Brouard Nicolas  <brouard@ined.fr>  2017-05-13  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c: Summary: 0.99 Back projections          * imach.c: Summary: temporary save for backprojection
   
 2015-12-23  Brouard Nicolas  <brouard@ined.fr>          * imach.c: Summary: Version 0.99r13 (improvements and bugs fixed)
   
         * imach.c: Summary: Experimental backcast  2017-04-26  Brouard Nicolas  <brouard@ined.fr>
   
 2015-12-18  Brouard Nicolas  <brouard@ined.fr>          * imach.c: Summary: imach 0.99r13 Some bugs fixed
   
         * imach.c: Summary: 0.98r4 Warning and status=-2          * imach.c: Summary: Labels in graphs
   
         Version 0.98r4 is now:  2017-04-24  Brouard Nicolas  <brouard@ined.fr>
          - displaying an error when status is -1, date of interview unknown and date of death known;  
          - permitting a status -2 when the vital status is unknown at a known date of right truncation.          * imach.c: Summary: to save
         Older changes concerning s=-2, dating from 2005 have been supersed.  
   2017-04-18  Brouard Nicolas  <brouard@ined.fr>
         * Makefile: *** empty log message ***  
           * imach.c: *** empty log message ***
 2015-12-16  Brouard Nicolas  <brouard@ined.fr>  
   2017-04-05  Brouard Nicolas  <brouard@ined.fr>
         * Makefile: *** empty log message ***  
           * imach.c: Summary: Bug in E_ as well as in T_ fixed nres-1 vs k1-1
         * imach.c: Summary: 0.98r4 working  
   2017-04-04  Brouard Nicolas  <brouard@ined.fr>
         * Makefile: Summary: linuxrpm added  
           * imach.c: Summary: Gnuplot indexations fixed (humm)
         * Makefile: *** empty log message ***  
           * imach.c:
         * imach.c: Summary: temporary not working          Summary: Some errors to warnings only if date of death is unknown but status is death we could set to pi3
   
 2015-12-11  Brouard Nicolas  <brouard@ined.fr>  2017-04-03  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c: Summary: 0.98r4          * imach.c: Summary: Version 0.99r12
           Some cleanings, conformed with updated documentation.
 2015-12-08  Brouard Nicolas  <brouard@ined.fr>  
   2017-03-30  Brouard Nicolas  <brouard@ined.fr>
         * Makefile: *** empty log message ***  
           * version.h: *** empty log message ***
 2015-11-21  Brouard Nicolas  <brouard@ined.fr>  
           * version.h: Summary:0.99r11
         * Makefile:  
         Summary: VBoxManage change from execute --image to run --exe and --wait-exit doesn't exist any more  2017-03-29  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c: Summary: minor typo          * imach.c: Summary: Temp
   
         * imach.c: Summary: 0.98r3 with some graph of projected cross-sectional  2017-03-27  Brouard Nicolas  <brouard@ined.fr>
   
         Author: Nicolas Brouard          * imach.c: Summary: Temporary
   
 2015-11-18  Brouard Nicolas  <brouard@ined.fr>  2017-03-08  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c: Summary: Start working on projected prevalences          * imach.c: Summary: IMaCh version 0.99r10 bugs in gnuplot fixed
   
 2015-11-17  Brouard Nicolas  <brouard@ined.fr>          * imach.c: Summary: Fixing data parameter line
   
         * imach.c: Summary: Adding ftolpl parameter  2016-12-15  Brouard Nicolas  <brouard@ined.fr>
         Author: N Brouard  
           * imach.c: Summary: 0.99 in progress
         We had difficulties to get smoothed confidence intervals. It was due  
         to the period prevalence which wasn't computed accurately. The inner  2016-09-15  Brouard Nicolas  <brouard@ined.fr>
         parameter ftolpl is now an outer parameter of the .imach parameter  
         file after estepm. If ftolpl is small 1.e-4 and estepm too,          * imach.c: *** empty log message ***
         computation are long.  
           * imach.c: Summary: not working
         * version.h: *** empty log message ***  
   2016-09-08  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: Summary: temporary  
           * imach.c: Summary: continue
 2015-10-27  Brouard Nicolas  <brouard@ined.fr>  
   2016-09-07  Brouard Nicolas  <brouard@ined.fr>
         * Makefile: *** empty log message ***  
           * imach.c: Summary: Starting values from frequencies
         * setup.iss.in: Summary: some new subdirs  
           * imach.c: *** empty log message ***
         * imach.c: *** empty log message ***  
   2016-09-02  Brouard Nicolas  <brouard@ined.fr>
         * setup.iss.in:  
         Summary: Adding gnuplot 5.1 with bin and etc for pango fonts          * imach.c: *** empty log message ***
   
 2015-10-24  Brouard Nicolas  <brouard@ined.fr>  2016-08-30  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c: *** empty log message ***          * imach.c: Summary: Fixing a lots
   
 2015-10-23  Brouard Nicolas  <brouard@ined.fr>  2016-08-29  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c:          * imach.c: Summary: gnuplot problem in Back projection to fix
         Summary: 0.98r3 some clarification for graphs on likelihood contributions  
           * imach.c: Summary: Better
 2015-10-01  Brouard Nicolas  <brouard@ined.fr>  
   2016-08-26  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: Summary: Some new graphs of contribution to likelihood  
           * imach.c:
 2015-09-30  Brouard Nicolas  <brouard@ined.fr>          Summary: Improvement in Powell output in order to copy and paste
   
         * Makefile:          * imach.c: Summary: Starting tests of 0.99
         Summary: Version read from version.h, itself read with cmake  
           * imach.c: Summary: to valgrind
         * imach.c: Summary: looking at better estimation of the hessian  
   2016-08-25  Brouard Nicolas  <brouard@ined.fr>
         Also a better criteria for convergence to the period prevalence And  
         therefore adding the number of years needed to converge. (The          * imach.c: *** empty log message ***
         prevalence in any alive state shold sum to one  
   2016-08-23  Brouard Nicolas  <brouard@ined.fr>
         * Makefile: *** empty log message ***  
           * imach.c: *** empty log message ***
 2015-09-22  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c: Summary: not working
         * imach.c:  
         Summary: Adding some overall graph on contribution to likelihood. Might change  2016-08-22  Brouard Nicolas  <brouard@ined.fr>
   
 2015-09-15  Brouard Nicolas  <brouard@ined.fr>          * imach.c: Summary: not working
   
         * Makefile: *** empty log message ***          * imach.c: Summary: Not working
   
         * imach.c: Summary: 0.98r0  2016-07-23  Brouard Nicolas  <brouard@ined.fr>
   
         - Some new graphs like suvival functions          * imach.c: Summary: Completing for func too
         - Some bugs fixed like model=1+age+V2.  
   2016-07-22  Brouard Nicolas  <brouard@ined.fr>
         * ChangeLog, Makefile: Summary: 0.98r0  
           * imach.c: Summary: Fixing some arrays, still debugging
         * CMakeLists.txt: Summary: Some tests for setup.iss  
   2016-07-21  Brouard Nicolas  <brouard@ined.fr>
 2015-09-15  Nicolas J Brouard   <nbrouard@tugault.ined.fr>  
           * imach.c:
         *  (Module): 0.98r0 Some new graphs, some bugs fixed: model=1+age+V2. etc          Summary: 0.99 working (more or less) for Asian Workshop on multitate methods
   
 2015-08-18  Nicolas J Brouard   <nbrouard@tugault.local>  2016-07-12  Brouard Nicolas  <brouard@ined.fr>
   
         *  (Module): Adding error when the covariance matrix doesn't contain the exact number of lines required by the model line.          * imach.c: Summary: temp
   
 2015-08-03  Nicolas J Brouard   <nbrouard@tugault.ined.fr>          * imach.c: Summary: saving but not running
   
         *  (Module): Changing Variance of one-step probabilities into Standard deviation (thanks to Yao-Chi Shih)  2016-07-01  Brouard Nicolas  <brouard@ined.fr>
   
 2014-12-16  Nicolas J Brouard   <nbrouard@tugault.local>          * imach.c: Summary: Fixes
   
         * imach.c (Module): Merging 1.61 to 1.162  2016-02-19  Brouard Nicolas  <brouard@ined.fr>
   
 2014-09-02  Nicolas J Brouard   <nbrouard@njbrouard.ined.fr>          * imach-0.98r.c: Summary: Kind of 0.98r? series, starting with r7
   
         * prevlim.h (Module):          * setup.iss, Makefile, version.h: *** empty log message ***
   
 2014-01-26  Nicolas J Brouard   <nbrouard@ledermann-2.local>          * imach.c: Summary: temporary
   
         * imach.c (Module): Trying to merge old staffs together while being at Tokyo. Not tested...  2016-02-17  Brouard Nicolas  <brouard@ined.fr>
         (Module): Version 0.98nR Running ok, but output format still only works for three covariates.  
           * imach.c: Summary: Probably last 0.98 stable version 0.98r6
 2010-04-29  brouard  <brouard@ined.fr>  
   2016-02-16  Brouard Nicolas  <brouard@ined.fr>
         * imach.c (Module): Checking covariates for more complex models  
         than V1+V2. A lot of change to be done. Unstable.          * imach.c: Summary: minor bug
   
 2010-04-26  brouard  <brouard@ined.fr>          * imach.c: Summary: 0.99r2
   
         * imach.c (Module): merging some libgsl code. Fixing computation  2016-02-15  Brouard Nicolas  <brouard@ined.fr>
         of likelione (using inter/intrapolation if mle = 0) in order to  
         get same likelihood as if mle=1.          * imach.c: *** empty log message ***
         Some cleaning of code and comments added.  
   2016-02-12  Brouard Nicolas  <brouard@ined.fr>
 2009-10-29  brouard  <brouard@ined.fr>  
           * imach.c: Summary: 0.99 Back projections
         * imach.c (Module): Now imach stops if date of birth, at least year of birth, is not given. Some cleaning of the code.  
   2015-12-23  Brouard Nicolas  <brouard@ined.fr>
 2006-06-30  Brouard Nicolas  <brouard@localhost>  
           * imach.c: Summary: Experimental backcast
         * imach.c (Module): Clarifications on computing e.j  
   2015-12-18  Brouard Nicolas  <brouard@ined.fr>
 2006-04-28  Brouard Nicolas  <brouard@localhost>  
           * imach.c: Summary: 0.98r4 Warning and status=-2
         * imach.c (Module): Yes the sum of survivors was wrong since  
         imach-114 because nhstepm was no more computed in the age          Version 0.98r4 is now:
         loop. Now we define nhstepma in the age loop.           - displaying an error when status is -1, date of interview unknown and date of death known;
         (Module): In order to speed up (in case of numerous covariates) we           - permitting a status -2 when the vital status is unknown at a known date of right truncation.
         compute health expectancies (without variances) in a first step          Older changes concerning s=-2, dating from 2005 have been supersed.
         and then all the health expectancies with variances or standard  
         deviation (needs data from the Hessian matrices) which slows the          * Makefile: *** empty log message ***
         computation.  
         In the future we should be able to stop the program is only health  2015-12-16  Brouard Nicolas  <brouard@ined.fr>
         expectancies and graph are needed without standard deviations.  
           * Makefile: *** empty log message ***
 2006-04-04  LIEVRE Agnes  <lievre@PC_00697.ined.fr>  
           * imach.c: Summary: 0.98r4 working
         * imach.iss (Module):  
           * Makefile: Summary: linuxrpm added
         * imach.c (Module): bugs in evsi + population file added in htm output file  
           * Makefile: *** empty log message ***
 2006-03-22  LIEVRE Agnes  <lievre@PC_00697.ined.fr>  
           * imach.c: Summary: temporary not working
         * imach.c (Module):  
   2015-12-11  Brouard Nicolas  <brouard@ined.fr>
 2006-03-20  Brouard Nicolas  <brouard@localhost>  
           * imach.c: Summary: 0.98r4
         * imach.c (Module): <title> changed, corresponds to .htm file  
         name. <head> headers where missing.  2015-12-08  Brouard Nicolas  <brouard@ined.fr>
   
         * Makefile (Module): 0.98g          * Makefile: *** empty log message ***
   
         * imach.c (Module): Weights can have a decimal point as for  2015-11-21  Brouard Nicolas  <brouard@ined.fr>
         English (a comma might work with a correct LC_NUMERIC environment,  
         otherwise the weight is truncated).          * Makefile:
         Modification of warning when the covariates values are not 0 or          Summary: VBoxManage change from execute --image to run --exe and --wait-exit doesn't exist any more
         1.  
         Version 0.98g          * imach.c: Summary: minor typo
   
 2006-03-16  LIEVRE Agnes  <lievre@PC_00697.ined.fr>          * imach.c: Summary: 0.98r3 with some graph of projected cross-sectional
   
         * imach.c (Module): Comments concerning covariates added          Author: Nicolas Brouard
   
         * noreg-setup.iss (Module): Version 0.98f  2015-11-18  Brouard Nicolas  <brouard@ined.fr>
   
         * Makefile (Module): Version 0.98f make _windows=1 imachcyg-setup          * imach.c: Summary: Start working on projected prevalences
   
         * imach.c (Module): refinements in the computation of lli if  2015-11-17  Brouard Nicolas  <brouard@ined.fr>
         status=-2 in order to have more reliable computation if stepm is  
         not 1 month. Version 0.98f          * imach.c: Summary: Adding ftolpl parameter
           Author: N Brouard
 2006-03-15  Brouard Nicolas  <brouard@localhost>  
           We had difficulties to get smoothed confidence intervals. It was due
         * imach.c (Module): Bug if status = -2, the loglikelihood was          to the period prevalence which wasn't computed accurately. The inner
         computed as likelihood omitting the logarithm. Version O.98e          parameter ftolpl is now an outer parameter of the .imach parameter
           file after estepm. If ftolpl is small 1.e-4 and estepm too,
 2006-03-14  Brouard Nicolas  <brouard@localhost>          computation are long.
   
         * imach.c (Module): varevsij Comments added explaining the second          * version.h: *** empty log message ***
         table of variances if popbased=1 .  
         (Module): Covariances of eij, ekl added, graphs fixed, new html link.          * imach.c: Summary: temporary
         (Module): Function pstamp added  
         (Module): Version 0.98d  2015-10-27  Brouard Nicolas  <brouard@ined.fr>
   
 2006-03-06  Brouard Nicolas  <brouard@localhost>          * Makefile: *** empty log message ***
   
         * imach.c (Module): Variance-covariance wrong links and          * setup.iss.in: Summary: some new subdirs
         varian-covariance of ej. is needed (Saito).  
           * imach.c: *** empty log message ***
 2006-02-27  Brouard Nicolas  <brouard@localhost>  
           * setup.iss.in:
         * imach.c (Module): One freematrix added in mlikeli!          Summary: Adding gnuplot 5.1 with bin and etc for pango fonts
   
 2006-02-26  Brouard Nicolas  <brouard@localhost>  2015-10-24  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c (Module): Some improvements in processing parameter          * imach.c: *** empty log message ***
         filename with strsep.  
   2015-10-23  Brouard Nicolas  <brouard@ined.fr>
 2006-02-24  Brouard Nicolas  <brouard@localhost>  
           * imach.c:
         * imach.c (Module): Memory leaks checks with valgrind and:          Summary: 0.98r3 some clarification for graphs on likelihood contributions
         datafile was not closed, some imatrix were not freed and on matrix  
         allocation too.  2015-10-01  Brouard Nicolas  <brouard@ined.fr>
   
 2006-02-09  LIEVRE Agnes  <lievre@PC_00697.ined.fr>          * imach.c: Summary: Some new graphs of contribution to likelihood
   
         * strsep.c (Module): Inclusion because not in mingw32!!!  2015-09-30  Brouard Nicolas  <brouard@ined.fr>
   
         * setup.iss.in (Module): IMACHSETUPVERSION added          * Makefile:
           Summary: Version read from version.h, itself read with cmake
         * noreg-setup.iss (Module): added to cvs tree  
           * imach.c: Summary: looking at better estimation of the hessian
         * Makefile (Module): IMACHSETUPVERSION added  
           Also a better criteria for convergence to the period prevalence And
 2006-01-30  BROUARD Nicolas  <brouard@localhost>          therefore adding the number of years needed to converge. (The
           prevalence in any alive state shold sum to one
         * Makefile (Module, Module): Latest Makefile  
           * Makefile: *** empty log message ***
         * imach.c (Module): Back to gnuplot.exe instead of wgnuplot.exe  
   2015-09-22  Brouard Nicolas  <brouard@ined.fr>
 2006-01-27  BROUARD Nicolas  <brouard@localhost>  
           * imach.c:
         * noreg-setup.iss (Module): ADDED          Summary: Adding some overall graph on contribution to likelihood. Might change
   
 2006-01-24  BROUARD Nicolas  <brouard@localhost>  2015-09-15  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c (Module): Comments (lines starting with a #) are allowed in data.          * Makefile: *** empty log message ***
   
 2005-10-25  Nicolas Brouard  <brouard@dhcp171.recherche.ined.fr>          * imach.c: Summary: 0.98r0
   
         * Makefile (Module): Added Imach98.pmsp and howto crete a dmg          - Some new graphs like survival functions
           - Some bugs fixed like model=1+age+V2.
         * createdmg.sh (Module): Creates a dmg disk for MaC OS/X  
           * ChangeLog, Makefile: Summary: 0.98r0
 2005-09-30    <lievre@PC_00595>  
           * CMakeLists.txt: Summary: Some tests for setup.iss
         * imach.c (Module): sump fixed, loop imx fixed, and simplifications.  
         (Module): If the status is missing at the last wave but we know  2015-09-15  Nicolas J Brouard   <nbrouard@tugault.ined.fr>
         that the person is alive, then we can code his/her status as -2  
         (instead of missing=-1 in earlier versions) and his/her          *  (Module): 0.98r0 Some new graphs, some bugs fixed: model=1+age+V2. etc
         contributions to the likelihood is 1 - Prob of dying from last  
         health status (= 1-p13= p11+p12 in the easiest case of somebody in  2015-08-18  Nicolas J Brouard   <nbrouard@tugault.local>
         the healthy state at last known wave). Version is 0.98  
           *  (Module): Adding error when the covariance matrix doesn't contain the exact number of lines required by the model line.
 2004-05-20  Brouard Nicolas  <brouard@localhost>  
   2015-08-03  Nicolas J Brouard   <nbrouard@tugault.ined.fr>
         * imach.c (Repository):  
         Agnes added a direct estimation of mortality (without the need of          *  (Module): Changing Variance of one-step probabilities into Standard deviation (thanks to Yao-Chi Shih)
         computing period prevalence and differential mortality). Thus here  
         is version 0.97a which has been distributed to some people at  2014-12-16  Nicolas J Brouard   <nbrouard@tugault.local>
         REVES 16 in Brugge using an Inno setup.exe for PCs. Estimates of  
         mortality using covariates is not done today. Estimating direct          * imach.c (Module): Merging 1.61 to 1.162
         mortality is a very different process because it doesn't need  
         interpolation because it is easy to get the lx from the force of  2014-09-02  Nicolas J Brouard   <nbrouard@njbrouard.ined.fr>
         the mortality mux in the simplest case as for a Gompertz (log mux  
         = a + b*x . But we have been able to incorporate the new code          * prevlim.h (Module): 
         within former imach program (0.96d) without deteriorating too much  
         the understanding of the program.  2014-01-26  Nicolas J Brouard   <nbrouard@ledermann-2.local>
   
 2003-06-25    <brouard@BROUARD>          * imach.c (Module): Trying to merge old staffs together while being at Tokyo. Not tested...
           (Module): Version 0.98nR Running ok, but output format still only works for three covariates.
         * imach.c (Module): On windows (cygwin) function asctime_r doesn't  
         exist so I changed back to asctime which exists.  2010-04-29  brouard  <brouard@ined.fr>
         (Module): Version 0.96b  
           * imach.c (Module): Checking covariates for more complex models
 2003-06-24    <brouard@BROUARD>          than V1+V2. A lot of change to be done. Unstable.
   
         * imach.c (Module): Some bugs corrected for windows. Also, when  2010-04-26  brouard  <brouard@ined.fr>
         mle=-1 a template is output in file "or"mypar.txt with the design  
         of the covariance matrix to be input.          * imach.c (Module): merging some libgsl code. Fixing computation
           of likelione (using inter/intrapolation if mle = 0) in order to
 2003-06-25  Brouard Nicolas  <brouard@homebrou>          get same likelihood as if mle=1.
           Some cleaning of code and comments added.
         * imach.c (Repository): Duplicated warning errors corrected.  
         (Repository): Elapsed time after each iteration is now output. It  2009-10-29  brouard  <brouard@ined.fr>
         helps to forecast when convergence will be reached. Elapsed time  
         is stamped in powell.  We created a new html file for the graphs          * imach.c (Module): Now imach stops if date of birth, at least year of birth, is not given. Some cleaning of the code.
         concerning matrix of covariance. It has extension -cov.htm.  
   2006-06-30  Brouard Nicolas  <brouard@localhost>
 2003-06-23  Brouard Nicolas  <brouard@homebrou>  
           * imach.c (Module): Clarifications on computing e.j
         * imach.c (Repository): Create a sub-directory where all the secondary files are. Only imach, htm, gp and r(imach) are on the main directory. Correct time and other things.  
   2006-04-28  Brouard Nicolas  <brouard@localhost>
 2003-06-18  Brouard Nicolas  <brouard@homebrou>  
           * imach.c (Module): Yes the sum of survivors was wrong since
         * imach.c (Repository): Suppress abusive calls to append to file html (solution was to put fichtm as a global variable. Version 0.96          imach-114 because nhstepm was no more computed in the age
           loop. Now we define nhstepma in the age loop.
 2003-06-17  Brouard Nicolas  <brouard@homebrou>          (Module): In order to speed up (in case of numerous covariates) we
           compute health expectancies (without variances) in a first step
           and then all the health expectancies with variances or standard
         * imach.c (Repository): Check when date of death was earlier that          deviation (needs data from the Hessian matrices) which slows the
         current date of interview. It may happen when the death was just          computation.
         prior to the death. In this case, dh was negative and likelihood          In the future we should be able to stop the program is only health
         was wrong (infinity). We still send an "Error" but patch by          expectancies and graph are needed without standard deviations.
         assuming that the date of death was just one stepm after the  
         interview.  2006-04-04  LIEVRE Agnes  <lievre@PC_00697.ined.fr>
         (Repository): Because some people have very long ID (first column)  
         we changed int to long in num[] and we added a new lvector for          * imach.iss (Module): 
         memory allocation. But we also truncated to 8 characters (left  
         truncation)          * imach.c (Module): bugs in evsi + population file added in htm output file
   
         (Repository): No more line truncation errors.  2006-03-22  LIEVRE Agnes  <lievre@PC_00697.ined.fr>
   
 2003-06-14  Brouard Nicolas  <brouard@homebrou>          * imach.c (Module): 
   
         * imach.c (Repository): Add of a routine likelione (likelihood  2006-03-20  Brouard Nicolas  <brouard@localhost>
         only once) which prints on a text file  
         (ilk) the contributions to the likelihood for each          * imach.c (Module): <title> changed, corresponds to .htm file
         individual/wave.          name. <head> headers where missing.
   
 2003-06-13  Brouard Nicolas  <brouard@homebrou>          * Makefile (Module): 0.98g
         * imach.c (Repository): Replace "freqsummary" at a correct  
         place. It differs from routine "prevalence" which may be called          * imach.c (Module): Weights can have a decimal point as for
         many times. Probs is memory consuming and must be used with          English (a comma might work with a correct LC_NUMERIC environment,
         parcimony.          otherwise the weight is truncated).
           Modification of warning when the covariates values are not 0 or
 2003-06-17    <brouard@BROUARD>          1. 
           Version 0.98g
         * timeval.h (Module): Added included file to make use of  
         gettimeofday working on win32 with cygwin.  2006-03-16  LIEVRE Agnes  <lievre@PC_00697.ined.fr>
   
 2003-05-16  Brouard Nicolas  <brouard@brouard>          * imach.c (Module): Comments concerning covariates added
         * imach.c (Module): Insert of a warning if the delay between two  
         waves is negative.          * noreg-setup.iss (Module): Version 0.98f
   
         * imach.c (Module):          * Makefile (Module): Version 0.98f make _windows=1 imachcyg-setup
   
 2003-05-03    <brouard@BROUARD>          * imach.c (Module): refinements in the computation of lli if
           status=-2 in order to have more reliable computation if stepm is
         * imach.c: Some cleaning          not 1 month. Version 0.98f
   
 2003-03-28    <brouard@BROUARD>  2006-03-15  Brouard Nicolas  <brouard@localhost>
         * imach.c (Module): In version up to 0.92 likelihood was computed  
         as if date of death was unknown. Death was treated as any other          * imach.c (Module): Bug if status = -2, the loglikelihood was
         health state: the date of the interview describes the actual state          computed as likelihood omitting the logarithm. Version O.98e
         and not the date of a change in health state. The former idea was  
         to consider that at each interview the state was recorded  2006-03-14  Brouard Nicolas  <brouard@localhost>
         (healthy, disable or death) and IMaCh was corrected; but when we  
         introduced the exact date of death then we should have modified          * imach.c (Module): varevsij Comments added explaining the second
         the contribution of an exact death to the likelihood. This new          table of variances if popbased=1 .
         contribution is smaller and very dependent of the step unit          (Module): Covariances of eij, ekl added, graphs fixed, new html link.
         stepm. It is no more the probability to die between last interview          (Module): Function pstamp added
         and month of death but the probability to survive from last          (Module): Version 0.98d 
         interview up to one month before death multiplied by the  
         probability to die within a month. Thanks to Chris  2006-03-06  Brouard Nicolas  <brouard@localhost>
         Jackson for correcting this bug.  Former versions increased  
         mortality artificially. The bad side is that we add another loop          * imach.c (Module): Variance-covariance wrong links and
           varian-covariance of ej. is needed (Saito).
   
         which slows down the processing. The difference can be up to 10%  2006-02-27  Brouard Nicolas  <brouard@localhost>
   
           * imach.c (Module): One freematrix added in mlikeli!
         lower mortality.  
   2006-02-26  Brouard Nicolas  <brouard@localhost>
   
           * imach.c (Module): Some improvements in processing parameter
           filename with strsep.
   
 2002-05-30    <brouard@BROUARD>  2006-02-24  Brouard Nicolas  <brouard@localhost>
   
           * imach.c (Module): Memory leaks checks with valgrind and:
           datafile was not closed, some imatrix were not freed and on matrix
           allocation too.
   
         *  2006-02-09  LIEVRE Agnes  <lievre@PC_00697.ined.fr>
   
           * strsep.c (Module): Inclusion because not in mingw32!!!
   
           * setup.iss.in (Module): IMACHSETUPVERSION added
   
         * imach.c (Module): Add correlation matrix of one-step          * noreg-setup.iss (Module): added to cvs tree
   
           * Makefile (Module): IMACHSETUPVERSION added
         probabilities and covariance matrix  
   2006-01-30  BROUARD Nicolas  <brouard@localhost>
   
           * Makefile (Module, Module): Latest Makefile
   
           * imach.c (Module): Back to gnuplot.exe instead of wgnuplot.exe
   
   2006-01-27  BROUARD Nicolas  <brouard@localhost>
   
           * noreg-setup.iss (Module): ADDED
   
   2006-01-24  BROUARD Nicolas  <brouard@localhost>
   
           * imach.c (Module): Comments (lines starting with a #) are allowed in data.
   
   2005-10-25  Nicolas Brouard  <brouard@dhcp171.recherche.ined.fr>
   
           * Makefile (Module): Added Imach98.pmsp and howto crete a dmg
   
           * createdmg.sh (Module): Creates a dmg disk for MaC OS/X
   
   2005-09-30    <lievre@PC_00595>
   
           * imach.c (Module): sump fixed, loop imx fixed, and simplifications.
           (Module): If the status is missing at the last wave but we know
           that the person is alive, then we can code his/her status as -2
           (instead of missing=-1 in earlier versions) and his/her
           contributions to the likelihood is 1 - Prob of dying from last
           health status (= 1-p13= p11+p12 in the easiest case of somebody in
           the healthy state at last known wave). Version is 0.98 
   
   2004-05-20  Brouard Nicolas  <brouard@localhost>
   
           * imach.c (Repository): 
           Agnes added a direct estimation of mortality (without the need of
           computing period prevalence and differential mortality). Thus here
           is version 0.97a which has been distributed to some people at
           REVES 16 in Brugge using an Inno setup.exe for PCs. Estimates of
           mortality using covariates is not done today. Estimating direct
           mortality is a very different process because it doesn't need
           interpolation because it is easy to get the lx from the force of
           the mortality mux in the simplest case as for a Gompertz (log mux
           = a + b*x . But we have been able to incorporate the new code
           within former imach program (0.96d) without deteriorating too much
           the understanding of the program. 
   
   2003-06-25    <brouard@BROUARD>
   
           * imach.c (Module): On windows (cygwin) function asctime_r doesn't
           exist so I changed back to asctime which exists.
           (Module): Version 0.96b
   
   2003-06-24    <brouard@BROUARD>
   
           * imach.c (Module): Some bugs corrected for windows. Also, when
           mle=-1 a template is output in file "or"mypar.txt with the design
           of the covariance matrix to be input.
   
   2003-06-25  Brouard Nicolas  <brouard@homebrou>
   
           * imach.c (Repository): Duplicated warning errors corrected.
           (Repository): Elapsed time after each iteration is now output. It
           helps to forecast when convergence will be reached. Elapsed time
           is stamped in powell.  We created a new html file for the graphs
           concerning matrix of covariance. It has extension -cov.htm.
   
   2003-06-23  Brouard Nicolas  <brouard@homebrou>
   
           * imach.c (Repository): Create a sub-directory where all the secondary files are. Only imach, htm, gp and r(imach) are on the main directory. Correct time and other things.
   
   2003-06-18  Brouard Nicolas  <brouard@homebrou>
   
           * imach.c (Repository): Suppress abusive calls to append to file html (solution was to put fichtm as a global variable. Version 0.96
   
   2003-06-17  Brouard Nicolas  <brouard@homebrou>
   
   
           * imach.c (Repository): Check when date of death was earlier that
           current date of interview. It may happen when the death was just
           prior to the death. In this case, dh was negative and likelihood
           was wrong (infinity). We still send an "Error" but patch by
           assuming that the date of death was just one stepm after the
           interview.
           (Repository): Because some people have very long ID (first column)
           we changed int to long in num[] and we added a new lvector for
           memory allocation. But we also truncated to 8 characters (left
           truncation)
   
           (Repository): No more line truncation errors.
   
   2003-06-14  Brouard Nicolas  <brouard@homebrou>
   
           * imach.c (Repository): Add of a routine likelione (likelihood
           only once) which prints on a text file
           (ilk) the contributions to the likelihood for each
           individual/wave.
   
   2003-06-13  Brouard Nicolas  <brouard@homebrou>
           * imach.c (Repository): Replace "freqsummary" at a correct
           place. It differs from routine "prevalence" which may be called
           many times. Probs is memory consuming and must be used with
           parcimony.
   
   2003-06-17    <brouard@BROUARD>
   
           * timeval.h (Module): Added included file to make use of
           gettimeofday working on win32 with cygwin.
   
   2003-05-16  Brouard Nicolas  <brouard@brouard>
           * imach.c (Module): Insert of a warning if the delay between two
           waves is negative.
   
           * imach.c (Module): 
   
   2003-05-03    <brouard@BROUARD>
   
           * imach.c: Some cleaning
   
   2003-03-28    <brouard@BROUARD>
           * imach.c (Module): In version up to 0.92 likelihood was computed
           as if date of death was unknown. Death was treated as any other
           health state: the date of the interview describes the actual state
           and not the date of a change in health state. The former idea was
           to consider that at each interview the state was recorded
           (healthy, disable or death) and IMaCh was corrected; but when we
           introduced the exact date of death then we should have modified
           the contribution of an exact death to the likelihood. This new
           contribution is smaller and very dependent of the step unit
           stepm. It is no more the probability to die between last interview
           and month of death but the probability to survive from last
           interview up to one month before death multiplied by the
           probability to die within a month. Thanks to Chris
           Jackson for correcting this bug.  Former versions increased
           mortality artificially. The bad side is that we add another loop
           which slows down the processing. The difference can be up to 10%
           lower mortality.
   
   2002-05-30    <brouard@BROUARD>
   
           * imach.c (Module): Add correlation matrix of one-step
           probabilities and covariance matrix
   
Removed from v.1.45  
changed lines
  Added in v.1.67

FreeBSD-CVSweb <freebsd-cvsweb@FreeBSD.org>