Diff for /imach/src/ChangeLog between versions 1.46 and 1.68

version 1.46, 2022/03/15 18:40:36 version 1.68, 2024/04/24 20:53:06
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 *Wed Mar 31 2021  Nicolas Brouard   <brouard@ined.fr>  2024-04-24  Nicolas Brouard   <brouard@ined.fr>
         * imach.c (Module): Still bugs in the result loop. Thank to Holly Benett  
           * (Module): This version comes late after having tested
 *2021-03-08  Nicolas Brouard   <brouard@ined.fr>          successfully the praxis C version of Buckhardt.  But Buckardt's
           version was difficult to read and Gegenfurtner's version had a few
         * ./ (Module): Fixed bug on result:          typos which made its results less reliable than Buckhardt's
           results.  The most important work consisted in retyping the Brent
 *2021-02-20  Nicolas Brouard   <brouard@ined.fr>          original PRAXIS program written in Algol W (published with errors,
           ommitting the transposition of matrix V before its QR reduction
         * imach.c (Module): Fix bug on quitting after result lines!          from Golub. I used the recent "awe" compiler from Gkynn Webster.
         (Module): Version 0.99r21          The awe library had errors, for example in arc tangent function
           which have been fixed.
 2021-02-12  Nicolas Brouard   <brouard@ined.fr>  
           The main objective was to get identical results with the three
         * imach.c (Module): The use of a Windows BOM (huge) file is now an error          versions: (1) Algol W, (2) Buckhardt'C version as well (3)
           Gegenfürtner C versions on the various test functions published by
           Brent in 1973 in Algol W.
 2021-02-11  Nicolas  Brouard   <brouard@ined.fr>  
           Also, in order to compare them, the random function had to produce
         *  (Module): imach.c Someone entered 'results:' instead of 'result:'. Now it is an error which is printed.          the same sequence for the 3 softwares. The random function used in
           imach corresponds to original Brent's random function written in
 2020-02-22  Brouard Nicolas  <brouard@ined.fr>          Algol W.  Other point, in Algol W, the arrays of dimension n are
           'normal' mathematical arrays starting from 1 to n. But this is a
         *  (Module): imach.c Update mle=-3 (for computing Life expectancy          real issue in C where, by default, arrays are starting from 0 to
         and life table from the data without any state)          n-1. In Buckhardt, as well as in Gegenfürtner C code, it can be
           seen that authors while trying to mimick original Brent Algol W
 2019-05-20  Brouard Nicolas  <brouard@ined.fr>          code are hesitating by changing either a loop originally from 1 to
           n in a loop from 0 to n-1, or keeping Brent's loop from 1 to n and
         * version.h: Summary: version 0.99.r19          shifting the index from original X(I) in Algol W to x[i-1] in C.
           But as IMaCh is using, since the beginning, the Numerical Recipes
         * imach.c: Summary: Projection syntax simplified          functions vector or matrix, I changed Geggenfürtner code to mimick
         We can now start projections, forward or backward, from the mean date          the original Algol W arrays. Thus the X(I) is translated in C as
         of inteviews up to or down to a number of years of projection:          x[i] which minimizes the errors. The Golub QR algorithm was
         prevforecast=1 yearsfproj=15.3 mobil_average=0          published in Algol with overflow errors which were reproduced in
         or          Brent's Algol W code. Buckhardt code fixed these errors which are
         prevforecast=1 starting-proj-date=1/1/2007 final-proj-date=12/31/2017 mobil_average=0          much more problematic in C than in Algol W.  Thus Buckhardt code
         or          seems very safe, but i haven't chosen it for IMaCh because the C
         prevbackcast=1 yearsbproj=12.3 mobil_average=1          style is horrible and almost unreadable compared to Gegenfürtner
         or          CO code which is very close to Brent's original. Also what makes
         prevbackcast=1 starting-back-date=1/10/1999 final-back-date=1/1/1985 mobil_average=1          Buckhardt code more difficult to read is, instead of passing the
           minimum of parameters in the functions calls, as it is in Algol
 2019-05-18  Brouard Nicolas  <brouard@ined.fr>          Brent's code or Gegenfürtner's code, the list of parameters is
           high. For example, the flin function LONG REAL PROCEDURE FLIN
         * imach.c: Summary: doxygen tex bug          (LONG REAL VALUE L) has only one parameter in Algol W, the
           Gegenfürtner flin function had two parameters: static double
 2019-05-16  Brouard Nicolas  <brouard@ined.fr>          flin(l, j) double l; { int i; double tflin[N];} but Buckhardt
           function has 14 parameters which makes the code unreadable and
         * imach.c: Summary: There was some wrong lines added          useless. Gegenfürtner used a lot of static variables or functions
           which I tried to minimize. Also in Gegefürtner, array dimensions
 2019-05-09  Brouard Nicolas  <brouard@ined.fr>          were fixed to N. In my adaptation the flin is static double
           flin(double l, int j) and the parameter used are global variables.
         * Makefile, imach.c: *** empty log message ***  
   2023-06-14  Nicolas Brouard   <brouard@ined.fr>
         * ChangeLog: Summary: C=  
           * imach.c (Module): Testing if conjugate gradient could be quicker
         * imach.c: Summary: Some updates          when lot of variables POWELLORIGINCONJUGATE
   
         * imach.c: Summary: Before ncovmax  2023-05-23  Nicolas Brouard   <brouard@ined.fr>
   
         * version.h: *** empty log message ***          * imach.c (Module): Fixed PROB_r 
   
         * imach.c: Summary: 0.99r18 unlimited number of individuals  2023-05-22  Nicolas Brouard   <brouard@ined.fr>
         The number n which was limited to 20,000 cases is now unlimited, from firstobs to lastobs. If the number is too for the virtual memory, probably an error will occur.  
           * imach.c (Module): In the ILK....txt file, the number of columns
 2018-12-13  Brouard Nicolas  <brouard@ined.fr>          before the covariates values is dependent of the number of states (16+nlstate): 0.99r46
   
         * imach.c: Summary: Bug for young ages (<-30) will be in r17  2023-05-08  Nicolas Brouard   <brouard@ined.fr>
   
 2018-12-05  Brouard Nicolas  <brouard@ined.fr>          *  (Module): Error V0 when result:. and model 1+age+V1: fixed
   
         * Makefile: Summary: 0.99r16  2023-04-29  Nicolas Brouard  <brouard@ined.fr>
   
 2018-05-02  Brouard Nicolas  <brouard@ined.fr>          * imach.c (Module): Inverting the model equation and fixingg bugs
           in the drawings
         * imach.c: Summary: Some bugs fixed          "1+age+V7*V4*age+V6*V4*age+V7*V3*age+V6*V3*age+V6*V2*age+V7*age+V6*age+V4*age+V3*age+V2*age+V7*V4+V6*V4+V7*V3+V6*V3+V7*V2+V6*V2+V7+V6+V4+V3+V2\000\0003+V2"
   
 2018-05-02  Brouard Nicolas  <brouard@ined.fr>  2023-04-24  Nicolas Brouard  <brouard@ined.fr>
   
         * imach.c:  Summary: Bug for young ages (<-30) will be in r17          * imach.c (Module): some bugs in printinggnuplot 
   
 2018-05-02  Brouard Nicolas  <brouard@ined.fr>  2022-09-19  Nicolas Brouard   <brouard@ined.fr>
   
         * imach.c: Summary: Some bugs fixed          * imach.c (Module): Version 0.99r42 needed a newer version of
           Gnuplot. But newer version 0.99r43 should run with the Gnuplot
 2018-05-01  Brouard Nicolas  <brouard@ined.fr>          version 5.0 or 5.1 distributed with IMaCh.
   
         * imach.c:  2022-09-18  Nicolas Brouard   <brouard@ined.fr>
         Summary: Bug fixed by providing frequencies only for non missing covariates  
           * imach.c (Module): Fixing when a state in the data is 0 or higher
 2018-04-27  Brouard Nicolas  <brouard@ined.fr>          than lstate+ndeath. Fixing the plot of contribution to Likelihood.
   
         * imach.c: Summary: some minor bugs  2022-09-16  Nicolas Brouard   <brouard@ined.fr>
   
 2018-04-21  Brouard Nicolas  <brouard@ined.fr>          * imach.c (Module): 0.99r41 Was an error when product of timevarying and fixed. Using FixedV[of name] now. Thank you  Feinuo
   
         * README.txt: *** empty log message ***  2022-09-14  Nicolas Brouard   <brouard@ined.fr>
   
         * imach.c: Summary: Some bugs fixed, valgrind tested          * imach.c (Module): Fixing names of variables in T_ (thanks to Feinuo)
   
 2018-04-20  Brouard Nicolas  <brouard@ined.fr>  2022-09-14  Nicolas Brouard   <brouard@ined.fr>
   
         * Makefile, README.txt, setup.iss: Summary: imach 0.99r16          * imach.c (Module): Version 0.99r39 with colored dummy covariates
           (fixed or time varying), using new last columns of
         * imach.c:          ILK_parameter.txt file.
         Summary: Computing mean and stdeviation of fixed quantitative variables  
   2022-09-11  Nicolas Brouard   <brouard@ined.fr>
 2018-04-19  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c (Module): Adding timevarying products of any kinds,
         * imach.c: Summary: Some minor bugs fixed          should work before shifting cotvar from ncovcol+nqv columns in
           order to have a correspondance between the column of cotvar and
         * version.h: *** empty log message ***          the id of column.
           (Module): Some cleaning and adding covariates in ILK.txt
 2018-02-27  Brouard Nicolas  <brouard@ined.fr>  
   2022-09-09  Nicolas Brouard   <brouard@ined.fr>
         * imach.c: *** empty log message ***  
           * imach.c (Module): Many improvements for fixing products of fixed
         * imach.c: Summary: Adding second argument for quitting          timevarying as well as fixed * fixed, and test with quantitative
           covariate.
 2018-02-21  Brouard Nicolas  <brouard@ined.fr>  
   2022-09-04  Nicolas Brouard   <brouard@ined.fr>
         * Makefile, README.txt, imach.c: Summary: 0.99r15  
         New Makefile with recent VirtualBox 5.26. Bug in sqrt negatve in imach.c          * imach.c (Module): Now the easy runs i.e. without result or
           model=1+age only did not work. The defautl combination should be 1
 2017-07-20  Brouard Nicolas  <brouard@ined.fr>          and not 0 because everything hasn't been tranformed yet.
   
         * imach.c: Summary: temporary working  2022-09-02  Nicolas Brouard   <brouard@ined.fr>
   
 2017-07-19  Brouard Nicolas  <brouard@ined.fr>          * imach.c: Version 0.99r35 because it outputs same results with
           1+age+V1+V1*age for females and 1+age for females only
         * imach.c: Summary: Bug for mobil_average=0 and prevforecast fixed(?)          (education=1 noweight)
   
 2017-07-17  Brouard Nicolas  <brouard@ined.fr>  2022-08-31  Nicolas Brouard   <brouard@ined.fr>
   
         * imach.c: Summary: BOM files can be read now          * imach.c (Module): Some improvments in fichtm and many verifications 0.99r34
   
 2017-06-30  Brouard Nicolas  <brouard@ined.fr>  2022-08-21  Nicolas Brouard   <brouard@ined.fr>
   
         * imach.c: Summary: Graphs improvements          * imach.c (Module): Version 0.99r33 A lot of changes in
           reassigning covariates: my first idea was that people will always
         * imach.c: Summary: Saito's color          use the first covariate V1 into the model but in fact they are
           producing data with many covariates and can use an equation model
 2017-06-29  Brouard Nicolas  <brouard@ined.fr>          with some of the covariate; it means that in a model V2+V3 instead
           of codtabm(k,Tvaraff[j]) which calculates for combination k, for
         * imach.c: Summary: Version 0.99r14          three covariates (V1, V2, V3) the value of Tvaraff[j], but in fact
           the equation model is restricted to two variables only (V2, V3)
 2017-06-27  Brouard Nicolas  <brouard@ined.fr>          and the combination for V2 should be codtabm(k,1) instead of
           (codtabm(k,2), and the code should be
         * imach.c: Summary: More documentation on projections          codtabm(k,TnsdVar[Tvaraff[j]]. Many many changes have been
           made. All of these should be simplified once a day like we did in
         * imach.c: Summary: Color of backprojection changed from 6 to 5(yellow)          hpxij() for example by using precov[nres] which is computed in
           decoderesult for each nres of each resultline. Loop should be done
         * imach.c: Summary: Some bug with rint          on the equation model globally by distinguishing only product with
           age (which are changing with age) and no more on type of
 2017-05-24  Brouard Nicolas  <brouard@ined.fr>          covariates, single dummies, single covariates. 
   
         * imach.c: *** empty log message ***  2022-08-06  Nicolas Brouard   <brouard@ined.fr>
   
 2017-05-23  Brouard Nicolas  <brouard@ined.fr>          *  imach.c (Module): Version of imach using partly decoderesult to rebuild xpxij function
   
         * imach.c: Summary: Code into subroutine, cleanings  2022-08-03  Nicolas Brouard   <brouard@ined.fr>
   
 2017-05-18  Brouard Nicolas  <brouard@ined.fr>          *  imach.c (Module): Many errors in graphs fixed with Vn*age covariates.
   
         * imach.c:  2022-07-25  Brouard Nicolas  <brouard@brouard.name>
         Summary: backprojection and confidence intervals of backprevalence  
           * imach.c (Module): Error cptcovn instead of nsd in bmij (was
 2017-05-13  Brouard Nicolas  <brouard@ined.fr>          coredumped, revealed by Feiuno, thank you.
   
         * imach.c: Summary: temporary save for backprojection  2022-07-23  Nicolas Brouard   <brouard@ined.fr>
   
         * imach.c: Summary: Version 0.99r13 (improvements and bugs fixed)          * r29 W and not sqrt(Wald)
   
 2017-04-26  Brouard Nicolas  <brouard@ined.fr>  2022-07-22  Nicolas Brouard   <brouard@ined.fr>
   
         * imach.c: Summary: imach 0.99r13 Some bugs fixed          *  imach.c (Module): Output of Wald test in the htm file and not only in the log. 
   
         * imach.c: Summary: Labels in graphs  2022-06-02  Brouard Nicolas  <brouard@brouard.name>
   
 2017-04-24  Brouard Nicolas  <brouard@ined.fr>          * imach.c (Module): Adding the Wald tests from the log to the main
           htm for better display of the maximum likelihood estimators.
         * imach.c: Summary: to save  
   2022-05-30  Brouard Nicolas  <brouard@brouard.name>
 2017-04-18  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c: With products of covariates (age or dummies or
         * imach.c: *** empty log message ***          quantitatives), estimates of parameters were good but when
           estimating variances the positions of newly created covariates
 2017-04-05  Brouard Nicolas  <brouard@ined.fr>          were wrongly assigned and results were wrong. Thank to Feinua_Sun!
   
         * imach.c: Summary: Bug in E_ as well as in T_ fixed nres-1 vs k1-1  2022-05-24  Nicolas Brouard   <brouard@ined.fr>
   
 2017-04-04  Brouard Nicolas  <brouard@ined.fr>          * imach.c (Module): Some attempts to find a bug of wrong estimates
           of confidencce intervals with product in the equation modelC
         * imach.c: Summary: Gnuplot indexations fixed (humm)  
   2022-05-15  Nicolas Brouard   <brouard@ined.fr>
         * imach.c:  
         Summary: Some errors to warnings only if date of death is unknown but status is death we could set to pi3          * imach.c (Module):  Some minor improvements
   
 2017-04-03  Brouard Nicolas  <brouard@ined.fr>  2022-04-13  Brouard Nicolas  <brouard@brouard.name>
   
         * imach.c: Summary: Version 0.99r12          * imach.c (Module): Adding link to text data files
         Some cleanings, conformed with updated documentation.  
   2022-04-11  Nicolas Brouard   <brouard@ined.fr>
 2017-03-30  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c (Module): Error in rewriting the 'r' file with yearsfproj or yearsbproj fixed
         * version.h: *** empty log message ***  
   2022-04-05  Brouard Nicolas  <brouard@ined.fr>
         * version.h: Summary:0.99r11  
           * imach.c (Module): Fixed covariates (dummy or quantitative)
 2017-03-29  Brouard Nicolas  <brouard@ined.fr>          with missing values have never been allowed but are ERRORS and
           program quits. Standard deviations of fixed covariates were
         * imach.c: Summary: Temp          wrongly computed. Mean and standard deviations of time varying
           covariates are still not computed.
 2017-03-27  Brouard Nicolas  <brouard@ined.fr>  
   2022-03-17  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: Summary: Temporary  
           * 99r25 Improvements in fixing discrepancies between covariates
 2017-03-08  Brouard Nicolas  <brouard@ined.fr>          missing in result line but in model. 
   
         * imach.c: Summary: IMaCh version 0.99r10 bugs in gnuplot fixed  *Wed Mar 31 2021  Nicolas Brouard   <brouard@ined.fr>
           * imach.c (Module): Still bugs in the result loop. Thank to Holly Benett
         * imach.c: Summary: Fixing data parameter line  
   *2021-03-08  Nicolas Brouard   <brouard@ined.fr>
 2016-12-15  Brouard Nicolas  <brouard@ined.fr>  
           * ./ (Module): Fixed bug on result:
         * imach.c: Summary: 0.99 in progress  
   *2021-02-20  Nicolas Brouard   <brouard@ined.fr>
 2016-09-15  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c (Module): Fix bug on quitting after result lines!
         * imach.c: *** empty log message ***          (Module): Version 0.99r21
   
         * imach.c: Summary: not working  2021-02-12  Nicolas Brouard   <brouard@ined.fr>
   
 2016-09-08  Brouard Nicolas  <brouard@ined.fr>          * imach.c (Module): The use of a Windows BOM (huge) file is now an error
   
         * imach.c: Summary: continue  
   2021-02-11  Nicolas  Brouard   <brouard@ined.fr>
 2016-09-07  Brouard Nicolas  <brouard@ined.fr>  
           *  (Module): imach.c Someone entered 'results:' instead of 'result:'. Now it is an error which is printed.
         * imach.c: Summary: Starting values from frequencies  
   2020-02-22  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: *** empty log message ***  
           *  (Module): imach.c Update mle=-3 (for computing Life expectancy
 2016-09-02  Brouard Nicolas  <brouard@ined.fr>          and life table from the data without any state)
   
         * imach.c: *** empty log message ***  2019-05-20  Brouard Nicolas  <brouard@ined.fr>
   
 2016-08-30  Brouard Nicolas  <brouard@ined.fr>          * version.h: Summary: version 0.99.r19
   
         * imach.c: Summary: Fixing a lots          * imach.c: Summary: Projection syntax simplified
           We can now start projections, forward or backward, from the mean date
 2016-08-29  Brouard Nicolas  <brouard@ined.fr>          of inteviews up to or down to a number of years of projection:
           prevforecast=1 yearsfproj=15.3 mobil_average=0
         * imach.c: Summary: gnuplot problem in Back projection to fix          or
           prevforecast=1 starting-proj-date=1/1/2007 final-proj-date=12/31/2017 mobil_average=0
         * imach.c: Summary: Better          or
           prevbackcast=1 yearsbproj=12.3 mobil_average=1
 2016-08-26  Brouard Nicolas  <brouard@ined.fr>          or
           prevbackcast=1 starting-back-date=1/10/1999 final-back-date=1/1/1985 mobil_average=1
         * imach.c:  
         Summary: Improvement in Powell output in order to copy and paste  2019-05-18  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c: Summary: Starting tests of 0.99          * imach.c: Summary: doxygen tex bug
   
         * imach.c: Summary: to valgrind  2019-05-16  Brouard Nicolas  <brouard@ined.fr>
   
 2016-08-25  Brouard Nicolas  <brouard@ined.fr>          * imach.c: Summary: There was some wrong lines added
   
         * imach.c: *** empty log message ***  2019-05-09  Brouard Nicolas  <brouard@ined.fr>
   
 2016-08-23  Brouard Nicolas  <brouard@ined.fr>          * Makefile, imach.c: *** empty log message ***
   
         * imach.c: *** empty log message ***          * ChangeLog: Summary: C=
   
         * imach.c: Summary: not working          * imach.c: Summary: Some updates
   
 2016-08-22  Brouard Nicolas  <brouard@ined.fr>          * imach.c: Summary: Before ncovmax
   
         * imach.c: Summary: not working          * version.h: *** empty log message ***
   
         * imach.c: Summary: Not working          * imach.c: Summary: 0.99r18 unlimited number of individuals
           The number n which was limited to 20,000 cases is now unlimited, from firstobs to lastobs. If the number is too for the virtual memory, probably an error will occur.
 2016-07-23  Brouard Nicolas  <brouard@ined.fr>  
   2018-12-13  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: Summary: Completing for func too  
           * imach.c: Summary: Bug for young ages (<-30) will be in r17
 2016-07-22  Brouard Nicolas  <brouard@ined.fr>  
   2018-12-05  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: Summary: Fixing some arrays, still debugging  
           * Makefile: Summary: 0.99r16
 2016-07-21  Brouard Nicolas  <brouard@ined.fr>  
   2018-05-02  Brouard Nicolas  <brouard@ined.fr>
         * imach.c:  
         Summary: 0.99 working (more or less) for Asian Workshop on multitate methods          * imach.c: Summary: Some bugs fixed
   
 2016-07-12  Brouard Nicolas  <brouard@ined.fr>  2018-05-02  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c: Summary: temp          * imach.c:  Summary: Bug for young ages (<-30) will be in r17
   
         * imach.c: Summary: saving but not running  2018-05-02  Brouard Nicolas  <brouard@ined.fr>
   
 2016-07-01  Brouard Nicolas  <brouard@ined.fr>          * imach.c: Summary: Some bugs fixed
   
         * imach.c: Summary: Fixes  2018-05-01  Brouard Nicolas  <brouard@ined.fr>
   
 2016-02-19  Brouard Nicolas  <brouard@ined.fr>          * imach.c:
           Summary: Bug fixed by providing frequencies only for non missing covariates
         * imach-0.98r.c: Summary: Kind of 0.98r? series, starting with r7  
   2018-04-27  Brouard Nicolas  <brouard@ined.fr>
         * setup.iss, Makefile, version.h: *** empty log message ***  
           * imach.c: Summary: some minor bugs
         * imach.c: Summary: temporary  
   2018-04-21  Brouard Nicolas  <brouard@ined.fr>
 2016-02-17  Brouard Nicolas  <brouard@ined.fr>  
           * README.txt: *** empty log message ***
         * imach.c: Summary: Probably last 0.98 stable version 0.98r6  
           * imach.c: Summary: Some bugs fixed, valgrind tested
 2016-02-16  Brouard Nicolas  <brouard@ined.fr>  
   2018-04-20  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: Summary: minor bug  
           * Makefile, README.txt, setup.iss: Summary: imach 0.99r16
         * imach.c: Summary: 0.99r2  
           * imach.c:
 2016-02-15  Brouard Nicolas  <brouard@ined.fr>          Summary: Computing mean and stdeviation of fixed quantitative variables
   
         * imach.c: *** empty log message ***  2018-04-19  Brouard Nicolas  <brouard@ined.fr>
   
 2016-02-12  Brouard Nicolas  <brouard@ined.fr>          * imach.c: Summary: Some minor bugs fixed
   
         * imach.c: Summary: 0.99 Back projections          * version.h: *** empty log message ***
   
 2015-12-23  Brouard Nicolas  <brouard@ined.fr>  2018-02-27  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c: Summary: Experimental backcast          * imach.c: *** empty log message ***
   
 2015-12-18  Brouard Nicolas  <brouard@ined.fr>          * imach.c: Summary: Adding second argument for quitting
   
         * imach.c: Summary: 0.98r4 Warning and status=-2  2018-02-21  Brouard Nicolas  <brouard@ined.fr>
   
         Version 0.98r4 is now:          * Makefile, README.txt, imach.c: Summary: 0.99r15
          - displaying an error when status is -1, date of interview unknown and date of death known;          New Makefile with recent VirtualBox 5.26. Bug in sqrt negatve in imach.c
          - permitting a status -2 when the vital status is unknown at a known date of right truncation.  
         Older changes concerning s=-2, dating from 2005 have been supersed.  2017-07-20  Brouard Nicolas  <brouard@ined.fr>
   
         * Makefile: *** empty log message ***          * imach.c: Summary: temporary working
   
 2015-12-16  Brouard Nicolas  <brouard@ined.fr>  2017-07-19  Brouard Nicolas  <brouard@ined.fr>
   
         * Makefile: *** empty log message ***          * imach.c: Summary: Bug for mobil_average=0 and prevforecast fixed(?)
   
         * imach.c: Summary: 0.98r4 working  2017-07-17  Brouard Nicolas  <brouard@ined.fr>
   
         * Makefile: Summary: linuxrpm added          * imach.c: Summary: BOM files can be read now
   
         * Makefile: *** empty log message ***  2017-06-30  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c: Summary: temporary not working          * imach.c: Summary: Graphs improvements
   
 2015-12-11  Brouard Nicolas  <brouard@ined.fr>          * imach.c: Summary: Saito's color
   
         * imach.c: Summary: 0.98r4  2017-06-29  Brouard Nicolas  <brouard@ined.fr>
   
 2015-12-08  Brouard Nicolas  <brouard@ined.fr>          * imach.c: Summary: Version 0.99r14
   
         * Makefile: *** empty log message ***  2017-06-27  Brouard Nicolas  <brouard@ined.fr>
   
 2015-11-21  Brouard Nicolas  <brouard@ined.fr>          * imach.c: Summary: More documentation on projections
   
         * Makefile:          * imach.c: Summary: Color of backprojection changed from 6 to 5(yellow)
         Summary: VBoxManage change from execute --image to run --exe and --wait-exit doesn't exist any more  
           * imach.c: Summary: Some bug with rint
         * imach.c: Summary: minor typo  
   2017-05-24  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: Summary: 0.98r3 with some graph of projected cross-sectional  
           * imach.c: *** empty log message ***
         Author: Nicolas Brouard  
   2017-05-23  Brouard Nicolas  <brouard@ined.fr>
 2015-11-18  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c: Summary: Code into subroutine, cleanings
         * imach.c: Summary: Start working on projected prevalences  
   2017-05-18  Brouard Nicolas  <brouard@ined.fr>
 2015-11-17  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c:
         * imach.c: Summary: Adding ftolpl parameter          Summary: backprojection and confidence intervals of backprevalence
         Author: N Brouard  
   2017-05-13  Brouard Nicolas  <brouard@ined.fr>
         We had difficulties to get smoothed confidence intervals. It was due  
         to the period prevalence which wasn't computed accurately. The inner          * imach.c: Summary: temporary save for backprojection
         parameter ftolpl is now an outer parameter of the .imach parameter  
         file after estepm. If ftolpl is small 1.e-4 and estepm too,          * imach.c: Summary: Version 0.99r13 (improvements and bugs fixed)
         computation are long.  
   2017-04-26  Brouard Nicolas  <brouard@ined.fr>
         * version.h: *** empty log message ***  
           * imach.c: Summary: imach 0.99r13 Some bugs fixed
         * imach.c: Summary: temporary  
           * imach.c: Summary: Labels in graphs
 2015-10-27  Brouard Nicolas  <brouard@ined.fr>  
   2017-04-24  Brouard Nicolas  <brouard@ined.fr>
         * Makefile: *** empty log message ***  
           * imach.c: Summary: to save
         * setup.iss.in: Summary: some new subdirs  
   2017-04-18  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: *** empty log message ***  
           * imach.c: *** empty log message ***
         * setup.iss.in:  
         Summary: Adding gnuplot 5.1 with bin and etc for pango fonts  2017-04-05  Brouard Nicolas  <brouard@ined.fr>
   
 2015-10-24  Brouard Nicolas  <brouard@ined.fr>          * imach.c: Summary: Bug in E_ as well as in T_ fixed nres-1 vs k1-1
   
         * imach.c: *** empty log message ***  2017-04-04  Brouard Nicolas  <brouard@ined.fr>
   
 2015-10-23  Brouard Nicolas  <brouard@ined.fr>          * imach.c: Summary: Gnuplot indexations fixed (humm)
   
         * imach.c:          * imach.c:
         Summary: 0.98r3 some clarification for graphs on likelihood contributions          Summary: Some errors to warnings only if date of death is unknown but status is death we could set to pi3
   
 2015-10-01  Brouard Nicolas  <brouard@ined.fr>  2017-04-03  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c: Summary: Some new graphs of contribution to likelihood          * imach.c: Summary: Version 0.99r12
           Some cleanings, conformed with updated documentation.
 2015-09-30  Brouard Nicolas  <brouard@ined.fr>  
   2017-03-30  Brouard Nicolas  <brouard@ined.fr>
         * Makefile:  
         Summary: Version read from version.h, itself read with cmake          * version.h: *** empty log message ***
   
         * imach.c: Summary: looking at better estimation of the hessian          * version.h: Summary:0.99r11
   
         Also a better criteria for convergence to the period prevalence And  2017-03-29  Brouard Nicolas  <brouard@ined.fr>
         therefore adding the number of years needed to converge. (The  
         prevalence in any alive state shold sum to one          * imach.c: Summary: Temp
   
         * Makefile: *** empty log message ***  2017-03-27  Brouard Nicolas  <brouard@ined.fr>
   
 2015-09-22  Brouard Nicolas  <brouard@ined.fr>          * imach.c: Summary: Temporary
   
         * imach.c:  2017-03-08  Brouard Nicolas  <brouard@ined.fr>
         Summary: Adding some overall graph on contribution to likelihood. Might change  
           * imach.c: Summary: IMaCh version 0.99r10 bugs in gnuplot fixed
 2015-09-15  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c: Summary: Fixing data parameter line
         * Makefile: *** empty log message ***  
   2016-12-15  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: Summary: 0.98r0  
           * imach.c: Summary: 0.99 in progress
         - Some new graphs like survival functions  
         - Some bugs fixed like model=1+age+V2.  2016-09-15  Brouard Nicolas  <brouard@ined.fr>
   
         * ChangeLog, Makefile: Summary: 0.98r0          * imach.c: *** empty log message ***
   
         * CMakeLists.txt: Summary: Some tests for setup.iss          * imach.c: Summary: not working
   
 2015-09-15  Nicolas J Brouard   <nbrouard@tugault.ined.fr>  2016-09-08  Brouard Nicolas  <brouard@ined.fr>
   
         *  (Module): 0.98r0 Some new graphs, some bugs fixed: model=1+age+V2. etc          * imach.c: Summary: continue
   
 2015-08-18  Nicolas J Brouard   <nbrouard@tugault.local>  2016-09-07  Brouard Nicolas  <brouard@ined.fr>
   
         *  (Module): Adding error when the covariance matrix doesn't contain the exact number of lines required by the model line.          * imach.c: Summary: Starting values from frequencies
   
 2015-08-03  Nicolas J Brouard   <nbrouard@tugault.ined.fr>          * imach.c: *** empty log message ***
   
         *  (Module): Changing Variance of one-step probabilities into Standard deviation (thanks to Yao-Chi Shih)  2016-09-02  Brouard Nicolas  <brouard@ined.fr>
   
 2014-12-16  Nicolas J Brouard   <nbrouard@tugault.local>          * imach.c: *** empty log message ***
   
         * imach.c (Module): Merging 1.61 to 1.162  2016-08-30  Brouard Nicolas  <brouard@ined.fr>
   
 2014-09-02  Nicolas J Brouard   <nbrouard@njbrouard.ined.fr>          * imach.c: Summary: Fixing a lots
   
         * prevlim.h (Module):  2016-08-29  Brouard Nicolas  <brouard@ined.fr>
   
 2014-01-26  Nicolas J Brouard   <nbrouard@ledermann-2.local>          * imach.c: Summary: gnuplot problem in Back projection to fix
   
         * imach.c (Module): Trying to merge old staffs together while being at Tokyo. Not tested...          * imach.c: Summary: Better
         (Module): Version 0.98nR Running ok, but output format still only works for three covariates.  
   2016-08-26  Brouard Nicolas  <brouard@ined.fr>
 2010-04-29  brouard  <brouard@ined.fr>  
           * imach.c:
         * imach.c (Module): Checking covariates for more complex models          Summary: Improvement in Powell output in order to copy and paste
         than V1+V2. A lot of change to be done. Unstable.  
           * imach.c: Summary: Starting tests of 0.99
 2010-04-26  brouard  <brouard@ined.fr>  
           * imach.c: Summary: to valgrind
         * imach.c (Module): merging some libgsl code. Fixing computation  
         of likelione (using inter/intrapolation if mle = 0) in order to  2016-08-25  Brouard Nicolas  <brouard@ined.fr>
         get same likelihood as if mle=1.  
         Some cleaning of code and comments added.          * imach.c: *** empty log message ***
   
 2009-10-29  brouard  <brouard@ined.fr>  2016-08-23  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c (Module): Now imach stops if date of birth, at least year of birth, is not given. Some cleaning of the code.          * imach.c: *** empty log message ***
   
 2006-06-30  Brouard Nicolas  <brouard@localhost>          * imach.c: Summary: not working
   
         * imach.c (Module): Clarifications on computing e.j  2016-08-22  Brouard Nicolas  <brouard@ined.fr>
   
 2006-04-28  Brouard Nicolas  <brouard@localhost>          * imach.c: Summary: not working
   
         * imach.c (Module): Yes the sum of survivors was wrong since          * imach.c: Summary: Not working
         imach-114 because nhstepm was no more computed in the age  
         loop. Now we define nhstepma in the age loop.  2016-07-23  Brouard Nicolas  <brouard@ined.fr>
         (Module): In order to speed up (in case of numerous covariates) we  
         compute health expectancies (without variances) in a first step          * imach.c: Summary: Completing for func too
         and then all the health expectancies with variances or standard  
         deviation (needs data from the Hessian matrices) which slows the  2016-07-22  Brouard Nicolas  <brouard@ined.fr>
         computation.  
         In the future we should be able to stop the program is only health          * imach.c: Summary: Fixing some arrays, still debugging
         expectancies and graph are needed without standard deviations.  
   2016-07-21  Brouard Nicolas  <brouard@ined.fr>
 2006-04-04  LIEVRE Agnes  <lievre@PC_00697.ined.fr>  
           * imach.c:
         * imach.iss (Module):          Summary: 0.99 working (more or less) for Asian Workshop on multitate methods
   
         * imach.c (Module): bugs in evsi + population file added in htm output file  2016-07-12  Brouard Nicolas  <brouard@ined.fr>
   
 2006-03-22  LIEVRE Agnes  <lievre@PC_00697.ined.fr>          * imach.c: Summary: temp
   
         * imach.c (Module):          * imach.c: Summary: saving but not running
   
 2006-03-20  Brouard Nicolas  <brouard@localhost>  2016-07-01  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c (Module): <title> changed, corresponds to .htm file          * imach.c: Summary: Fixes
         name. <head> headers where missing.  
   2016-02-19  Brouard Nicolas  <brouard@ined.fr>
         * Makefile (Module): 0.98g  
           * imach-0.98r.c: Summary: Kind of 0.98r? series, starting with r7
         * imach.c (Module): Weights can have a decimal point as for  
         English (a comma might work with a correct LC_NUMERIC environment,          * setup.iss, Makefile, version.h: *** empty log message ***
         otherwise the weight is truncated).  
         Modification of warning when the covariates values are not 0 or          * imach.c: Summary: temporary
         1.  
         Version 0.98g  2016-02-17  Brouard Nicolas  <brouard@ined.fr>
   
 2006-03-16  LIEVRE Agnes  <lievre@PC_00697.ined.fr>          * imach.c: Summary: Probably last 0.98 stable version 0.98r6
   
         * imach.c (Module): Comments concerning covariates added  2016-02-16  Brouard Nicolas  <brouard@ined.fr>
   
         * noreg-setup.iss (Module): Version 0.98f          * imach.c: Summary: minor bug
   
         * Makefile (Module): Version 0.98f make _windows=1 imachcyg-setup          * imach.c: Summary: 0.99r2
   
         * imach.c (Module): refinements in the computation of lli if  2016-02-15  Brouard Nicolas  <brouard@ined.fr>
         status=-2 in order to have more reliable computation if stepm is  
         not 1 month. Version 0.98f          * imach.c: *** empty log message ***
   
 2006-03-15  Brouard Nicolas  <brouard@localhost>  2016-02-12  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c (Module): Bug if status = -2, the loglikelihood was          * imach.c: Summary: 0.99 Back projections
         computed as likelihood omitting the logarithm. Version O.98e  
   2015-12-23  Brouard Nicolas  <brouard@ined.fr>
 2006-03-14  Brouard Nicolas  <brouard@localhost>  
           * imach.c: Summary: Experimental backcast
         * imach.c (Module): varevsij Comments added explaining the second  
         table of variances if popbased=1 .  2015-12-18  Brouard Nicolas  <brouard@ined.fr>
         (Module): Covariances of eij, ekl added, graphs fixed, new html link.  
         (Module): Function pstamp added          * imach.c: Summary: 0.98r4 Warning and status=-2
         (Module): Version 0.98d  
           Version 0.98r4 is now:
 2006-03-06  Brouard Nicolas  <brouard@localhost>           - displaying an error when status is -1, date of interview unknown and date of death known;
            - permitting a status -2 when the vital status is unknown at a known date of right truncation.
         * imach.c (Module): Variance-covariance wrong links and          Older changes concerning s=-2, dating from 2005 have been supersed.
         varian-covariance of ej. is needed (Saito).  
           * Makefile: *** empty log message ***
 2006-02-27  Brouard Nicolas  <brouard@localhost>  
   2015-12-16  Brouard Nicolas  <brouard@ined.fr>
         * imach.c (Module): One freematrix added in mlikeli!  
           * Makefile: *** empty log message ***
 2006-02-26  Brouard Nicolas  <brouard@localhost>  
           * imach.c: Summary: 0.98r4 working
         * imach.c (Module): Some improvements in processing parameter  
         filename with strsep.          * Makefile: Summary: linuxrpm added
   
 2006-02-24  Brouard Nicolas  <brouard@localhost>          * Makefile: *** empty log message ***
   
         * imach.c (Module): Memory leaks checks with valgrind and:          * imach.c: Summary: temporary not working
         datafile was not closed, some imatrix were not freed and on matrix  
         allocation too.  2015-12-11  Brouard Nicolas  <brouard@ined.fr>
   
 2006-02-09  LIEVRE Agnes  <lievre@PC_00697.ined.fr>          * imach.c: Summary: 0.98r4
   
         * strsep.c (Module): Inclusion because not in mingw32!!!  2015-12-08  Brouard Nicolas  <brouard@ined.fr>
   
         * setup.iss.in (Module): IMACHSETUPVERSION added          * Makefile: *** empty log message ***
   
         * noreg-setup.iss (Module): added to cvs tree  2015-11-21  Brouard Nicolas  <brouard@ined.fr>
   
         * Makefile (Module): IMACHSETUPVERSION added          * Makefile:
           Summary: VBoxManage change from execute --image to run --exe and --wait-exit doesn't exist any more
 2006-01-30  BROUARD Nicolas  <brouard@localhost>  
           * imach.c: Summary: minor typo
         * Makefile (Module, Module): Latest Makefile  
           * imach.c: Summary: 0.98r3 with some graph of projected cross-sectional
         * imach.c (Module): Back to gnuplot.exe instead of wgnuplot.exe  
           Author: Nicolas Brouard
 2006-01-27  BROUARD Nicolas  <brouard@localhost>  
   2015-11-18  Brouard Nicolas  <brouard@ined.fr>
         * noreg-setup.iss (Module): ADDED  
           * imach.c: Summary: Start working on projected prevalences
 2006-01-24  BROUARD Nicolas  <brouard@localhost>  
   2015-11-17  Brouard Nicolas  <brouard@ined.fr>
         * imach.c (Module): Comments (lines starting with a #) are allowed in data.  
           * imach.c: Summary: Adding ftolpl parameter
 2005-10-25  Nicolas Brouard  <brouard@dhcp171.recherche.ined.fr>          Author: N Brouard
   
         * Makefile (Module): Added Imach98.pmsp and howto crete a dmg          We had difficulties to get smoothed confidence intervals. It was due
           to the period prevalence which wasn't computed accurately. The inner
         * createdmg.sh (Module): Creates a dmg disk for MaC OS/X          parameter ftolpl is now an outer parameter of the .imach parameter
           file after estepm. If ftolpl is small 1.e-4 and estepm too,
 2005-09-30    <lievre@PC_00595>          computation are long.
   
         * imach.c (Module): sump fixed, loop imx fixed, and simplifications.          * version.h: *** empty log message ***
         (Module): If the status is missing at the last wave but we know  
         that the person is alive, then we can code his/her status as -2          * imach.c: Summary: temporary
         (instead of missing=-1 in earlier versions) and his/her  
         contributions to the likelihood is 1 - Prob of dying from last  2015-10-27  Brouard Nicolas  <brouard@ined.fr>
         health status (= 1-p13= p11+p12 in the easiest case of somebody in  
         the healthy state at last known wave). Version is 0.98          * Makefile: *** empty log message ***
   
 2004-05-20  Brouard Nicolas  <brouard@localhost>          * setup.iss.in: Summary: some new subdirs
   
         * imach.c (Repository):          * imach.c: *** empty log message ***
         Agnes added a direct estimation of mortality (without the need of  
         computing period prevalence and differential mortality). Thus here          * setup.iss.in:
         is version 0.97a which has been distributed to some people at          Summary: Adding gnuplot 5.1 with bin and etc for pango fonts
         REVES 16 in Brugge using an Inno setup.exe for PCs. Estimates of  
         mortality using covariates is not done today. Estimating direct  2015-10-24  Brouard Nicolas  <brouard@ined.fr>
         mortality is a very different process because it doesn't need  
         interpolation because it is easy to get the lx from the force of          * imach.c: *** empty log message ***
         the mortality mux in the simplest case as for a Gompertz (log mux  
         = a + b*x . But we have been able to incorporate the new code  2015-10-23  Brouard Nicolas  <brouard@ined.fr>
         within former imach program (0.96d) without deteriorating too much  
         the understanding of the program.          * imach.c:
           Summary: 0.98r3 some clarification for graphs on likelihood contributions
 2003-06-25    <brouard@BROUARD>  
   2015-10-01  Brouard Nicolas  <brouard@ined.fr>
         * imach.c (Module): On windows (cygwin) function asctime_r doesn't  
         exist so I changed back to asctime which exists.          * imach.c: Summary: Some new graphs of contribution to likelihood
         (Module): Version 0.96b  
   2015-09-30  Brouard Nicolas  <brouard@ined.fr>
 2003-06-24    <brouard@BROUARD>  
           * Makefile:
         * imach.c (Module): Some bugs corrected for windows. Also, when          Summary: Version read from version.h, itself read with cmake
         mle=-1 a template is output in file "or"mypar.txt with the design  
         of the covariance matrix to be input.          * imach.c: Summary: looking at better estimation of the hessian
   
 2003-06-25  Brouard Nicolas  <brouard@homebrou>          Also a better criteria for convergence to the period prevalence And
           therefore adding the number of years needed to converge. (The
         * imach.c (Repository): Duplicated warning errors corrected.          prevalence in any alive state shold sum to one
         (Repository): Elapsed time after each iteration is now output. It  
         helps to forecast when convergence will be reached. Elapsed time          * Makefile: *** empty log message ***
         is stamped in powell.  We created a new html file for the graphs  
         concerning matrix of covariance. It has extension -cov.htm.  2015-09-22  Brouard Nicolas  <brouard@ined.fr>
   
 2003-06-23  Brouard Nicolas  <brouard@homebrou>          * imach.c:
           Summary: Adding some overall graph on contribution to likelihood. Might change
         * imach.c (Repository): Create a sub-directory where all the secondary files are. Only imach, htm, gp and r(imach) are on the main directory. Correct time and other things.  
   2015-09-15  Brouard Nicolas  <brouard@ined.fr>
 2003-06-18  Brouard Nicolas  <brouard@homebrou>  
           * Makefile: *** empty log message ***
         * imach.c (Repository): Suppress abusive calls to append to file html (solution was to put fichtm as a global variable. Version 0.96  
           * imach.c: Summary: 0.98r0
 2003-06-17  Brouard Nicolas  <brouard@homebrou>  
           - Some new graphs like survival functions
           - Some bugs fixed like model=1+age+V2.
         * imach.c (Repository): Check when date of death was earlier that  
         current date of interview. It may happen when the death was just          * ChangeLog, Makefile: Summary: 0.98r0
         prior to the death. In this case, dh was negative and likelihood  
         was wrong (infinity). We still send an "Error" but patch by          * CMakeLists.txt: Summary: Some tests for setup.iss
         assuming that the date of death was just one stepm after the  
         interview.  2015-09-15  Nicolas J Brouard   <nbrouard@tugault.ined.fr>
         (Repository): Because some people have very long ID (first column)  
         we changed int to long in num[] and we added a new lvector for          *  (Module): 0.98r0 Some new graphs, some bugs fixed: model=1+age+V2. etc
         memory allocation. But we also truncated to 8 characters (left  
         truncation)  2015-08-18  Nicolas J Brouard   <nbrouard@tugault.local>
   
         (Repository): No more line truncation errors.          *  (Module): Adding error when the covariance matrix doesn't contain the exact number of lines required by the model line.
   
 2003-06-14  Brouard Nicolas  <brouard@homebrou>  2015-08-03  Nicolas J Brouard   <nbrouard@tugault.ined.fr>
   
         * imach.c (Repository): Add of a routine likelione (likelihood          *  (Module): Changing Variance of one-step probabilities into Standard deviation (thanks to Yao-Chi Shih)
         only once) which prints on a text file  
         (ilk) the contributions to the likelihood for each  2014-12-16  Nicolas J Brouard   <nbrouard@tugault.local>
         individual/wave.  
           * imach.c (Module): Merging 1.61 to 1.162
 2003-06-13  Brouard Nicolas  <brouard@homebrou>  
         * imach.c (Repository): Replace "freqsummary" at a correct  2014-09-02  Nicolas J Brouard   <nbrouard@njbrouard.ined.fr>
         place. It differs from routine "prevalence" which may be called  
         many times. Probs is memory consuming and must be used with          * prevlim.h (Module): 
         parcimony.  
   2014-01-26  Nicolas J Brouard   <nbrouard@ledermann-2.local>
 2003-06-17    <brouard@BROUARD>  
           * imach.c (Module): Trying to merge old staffs together while being at Tokyo. Not tested...
         * timeval.h (Module): Added included file to make use of          (Module): Version 0.98nR Running ok, but output format still only works for three covariates.
         gettimeofday working on win32 with cygwin.  
   2010-04-29  brouard  <brouard@ined.fr>
 2003-05-16  Brouard Nicolas  <brouard@brouard>  
         * imach.c (Module): Insert of a warning if the delay between two          * imach.c (Module): Checking covariates for more complex models
         waves is negative.          than V1+V2. A lot of change to be done. Unstable.
   
         * imach.c (Module):  2010-04-26  brouard  <brouard@ined.fr>
   
 2003-05-03    <brouard@BROUARD>          * imach.c (Module): merging some libgsl code. Fixing computation
           of likelione (using inter/intrapolation if mle = 0) in order to
         * imach.c: Some cleaning          get same likelihood as if mle=1.
           Some cleaning of code and comments added.
 2003-03-28    <brouard@BROUARD>  
         * imach.c (Module): In version up to 0.92 likelihood was computed  2009-10-29  brouard  <brouard@ined.fr>
         as if date of death was unknown. Death was treated as any other  
         health state: the date of the interview describes the actual state          * imach.c (Module): Now imach stops if date of birth, at least year of birth, is not given. Some cleaning of the code.
         and not the date of a change in health state. The former idea was  
         to consider that at each interview the state was recorded  2006-06-30  Brouard Nicolas  <brouard@localhost>
         (healthy, disable or death) and IMaCh was corrected; but when we  
         introduced the exact date of death then we should have modified          * imach.c (Module): Clarifications on computing e.j
         the contribution of an exact death to the likelihood. This new  
         contribution is smaller and very dependent of the step unit  2006-04-28  Brouard Nicolas  <brouard@localhost>
         stepm. It is no more the probability to die between last interview  
         and month of death but the probability to survive from last          * imach.c (Module): Yes the sum of survivors was wrong since
         interview up to one month before death multiplied by the          imach-114 because nhstepm was no more computed in the age
         probability to die within a month. Thanks to Chris          loop. Now we define nhstepma in the age loop.
         Jackson for correcting this bug.  Former versions increased          (Module): In order to speed up (in case of numerous covariates) we
         mortality artificially. The bad side is that we add another loop          compute health expectancies (without variances) in a first step
         which slows down the processing. The difference can be up to 10%          and then all the health expectancies with variances or standard
         lower mortality.          deviation (needs data from the Hessian matrices) which slows the
           computation.
 2002-05-30    <brouard@BROUARD>          In the future we should be able to stop the program is only health
         *          expectancies and graph are needed without standard deviations.
         * imach.c (Module): Add correlation matrix of one-step  
         probabilities and covariance matrix  2006-04-04  LIEVRE Agnes  <lievre@PC_00697.ined.fr>
   
           * imach.iss (Module): 
   
           * imach.c (Module): bugs in evsi + population file added in htm output file
   
   2006-03-22  LIEVRE Agnes  <lievre@PC_00697.ined.fr>
   
           * imach.c (Module): 
   
   2006-03-20  Brouard Nicolas  <brouard@localhost>
   
           * imach.c (Module): <title> changed, corresponds to .htm file
           name. <head> headers where missing.
   
           * Makefile (Module): 0.98g
   
           * imach.c (Module): Weights can have a decimal point as for
           English (a comma might work with a correct LC_NUMERIC environment,
           otherwise the weight is truncated).
           Modification of warning when the covariates values are not 0 or
           1. 
           Version 0.98g
   
   2006-03-16  LIEVRE Agnes  <lievre@PC_00697.ined.fr>
   
           * imach.c (Module): Comments concerning covariates added
   
           * noreg-setup.iss (Module): Version 0.98f
   
           * Makefile (Module): Version 0.98f make _windows=1 imachcyg-setup
   
           * imach.c (Module): refinements in the computation of lli if
           status=-2 in order to have more reliable computation if stepm is
           not 1 month. Version 0.98f
   
   2006-03-15  Brouard Nicolas  <brouard@localhost>
   
           * imach.c (Module): Bug if status = -2, the loglikelihood was
           computed as likelihood omitting the logarithm. Version O.98e
   
   2006-03-14  Brouard Nicolas  <brouard@localhost>
   
           * imach.c (Module): varevsij Comments added explaining the second
           table of variances if popbased=1 .
           (Module): Covariances of eij, ekl added, graphs fixed, new html link.
           (Module): Function pstamp added
           (Module): Version 0.98d 
   
   2006-03-06  Brouard Nicolas  <brouard@localhost>
   
           * imach.c (Module): Variance-covariance wrong links and
           varian-covariance of ej. is needed (Saito).
   
   2006-02-27  Brouard Nicolas  <brouard@localhost>
   
           * imach.c (Module): One freematrix added in mlikeli!
   
   2006-02-26  Brouard Nicolas  <brouard@localhost>
   
           * imach.c (Module): Some improvements in processing parameter
           filename with strsep.
   
   2006-02-24  Brouard Nicolas  <brouard@localhost>
   
           * imach.c (Module): Memory leaks checks with valgrind and:
           datafile was not closed, some imatrix were not freed and on matrix
           allocation too.
   
   2006-02-09  LIEVRE Agnes  <lievre@PC_00697.ined.fr>
   
           * strsep.c (Module): Inclusion because not in mingw32!!!
   
           * setup.iss.in (Module): IMACHSETUPVERSION added
   
           * noreg-setup.iss (Module): added to cvs tree
   
           * Makefile (Module): IMACHSETUPVERSION added
   
   2006-01-30  BROUARD Nicolas  <brouard@localhost>
   
           * Makefile (Module, Module): Latest Makefile
   
           * imach.c (Module): Back to gnuplot.exe instead of wgnuplot.exe
   
   2006-01-27  BROUARD Nicolas  <brouard@localhost>
   
           * noreg-setup.iss (Module): ADDED
   
   2006-01-24  BROUARD Nicolas  <brouard@localhost>
   
           * imach.c (Module): Comments (lines starting with a #) are allowed in data.
   
   2005-10-25  Nicolas Brouard  <brouard@dhcp171.recherche.ined.fr>
   
           * Makefile (Module): Added Imach98.pmsp and howto crete a dmg
   
           * createdmg.sh (Module): Creates a dmg disk for MaC OS/X
   
   2005-09-30    <lievre@PC_00595>
   
           * imach.c (Module): sump fixed, loop imx fixed, and simplifications.
           (Module): If the status is missing at the last wave but we know
           that the person is alive, then we can code his/her status as -2
           (instead of missing=-1 in earlier versions) and his/her
           contributions to the likelihood is 1 - Prob of dying from last
           health status (= 1-p13= p11+p12 in the easiest case of somebody in
           the healthy state at last known wave). Version is 0.98 
   
   2004-05-20  Brouard Nicolas  <brouard@localhost>
   
           * imach.c (Repository): 
           Agnes added a direct estimation of mortality (without the need of
           computing period prevalence and differential mortality). Thus here
           is version 0.97a which has been distributed to some people at
           REVES 16 in Brugge using an Inno setup.exe for PCs. Estimates of
           mortality using covariates is not done today. Estimating direct
           mortality is a very different process because it doesn't need
           interpolation because it is easy to get the lx from the force of
           the mortality mux in the simplest case as for a Gompertz (log mux
           = a + b*x . But we have been able to incorporate the new code
           within former imach program (0.96d) without deteriorating too much
           the understanding of the program. 
   
   2003-06-25    <brouard@BROUARD>
   
           * imach.c (Module): On windows (cygwin) function asctime_r doesn't
           exist so I changed back to asctime which exists.
           (Module): Version 0.96b
   
   2003-06-24    <brouard@BROUARD>
   
           * imach.c (Module): Some bugs corrected for windows. Also, when
           mle=-1 a template is output in file "or"mypar.txt with the design
           of the covariance matrix to be input.
   
   2003-06-25  Brouard Nicolas  <brouard@homebrou>
   
           * imach.c (Repository): Duplicated warning errors corrected.
           (Repository): Elapsed time after each iteration is now output. It
           helps to forecast when convergence will be reached. Elapsed time
           is stamped in powell.  We created a new html file for the graphs
           concerning matrix of covariance. It has extension -cov.htm.
   
   2003-06-23  Brouard Nicolas  <brouard@homebrou>
   
           * imach.c (Repository): Create a sub-directory where all the secondary files are. Only imach, htm, gp and r(imach) are on the main directory. Correct time and other things.
   
   2003-06-18  Brouard Nicolas  <brouard@homebrou>
   
           * imach.c (Repository): Suppress abusive calls to append to file html (solution was to put fichtm as a global variable. Version 0.96
   
   2003-06-17  Brouard Nicolas  <brouard@homebrou>
   
   
           * imach.c (Repository): Check when date of death was earlier that
           current date of interview. It may happen when the death was just
           prior to the death. In this case, dh was negative and likelihood
           was wrong (infinity). We still send an "Error" but patch by
           assuming that the date of death was just one stepm after the
           interview.
           (Repository): Because some people have very long ID (first column)
           we changed int to long in num[] and we added a new lvector for
           memory allocation. But we also truncated to 8 characters (left
           truncation)
   
           (Repository): No more line truncation errors.
   
   2003-06-14  Brouard Nicolas  <brouard@homebrou>
   
           * imach.c (Repository): Add of a routine likelione (likelihood
           only once) which prints on a text file
           (ilk) the contributions to the likelihood for each
           individual/wave.
   
   2003-06-13  Brouard Nicolas  <brouard@homebrou>
           * imach.c (Repository): Replace "freqsummary" at a correct
           place. It differs from routine "prevalence" which may be called
           many times. Probs is memory consuming and must be used with
           parcimony.
   
   2003-06-17    <brouard@BROUARD>
   
           * timeval.h (Module): Added included file to make use of
           gettimeofday working on win32 with cygwin.
   
   2003-05-16  Brouard Nicolas  <brouard@brouard>
           * imach.c (Module): Insert of a warning if the delay between two
           waves is negative.
   
           * imach.c (Module): 
   
   2003-05-03    <brouard@BROUARD>
   
           * imach.c: Some cleaning
   
   2003-03-28    <brouard@BROUARD>
           * imach.c (Module): In version up to 0.92 likelihood was computed
           as if date of death was unknown. Death was treated as any other
           health state: the date of the interview describes the actual state
           and not the date of a change in health state. The former idea was
           to consider that at each interview the state was recorded
           (healthy, disable or death) and IMaCh was corrected; but when we
           introduced the exact date of death then we should have modified
           the contribution of an exact death to the likelihood. This new
           contribution is smaller and very dependent of the step unit
           stepm. It is no more the probability to die between last interview
           and month of death but the probability to survive from last
           interview up to one month before death multiplied by the
           probability to die within a month. Thanks to Chris
           Jackson for correcting this bug.  Former versions increased
           mortality artificially. The bad side is that we add another loop
           which slows down the processing. The difference can be up to 10%
           lower mortality.
   
   2002-05-30    <brouard@BROUARD>
   
           * imach.c (Module): Add correlation matrix of one-step
           probabilities and covariance matrix
   

Removed from v.1.46  
changed lines
  Added in v.1.68


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