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Diff for /imach/CMakeLists.txt between versions 1.1 and 1.14

version 1.1, 2015/08/18 16:44:58 version 1.14, 2017/03/30 07:53:37
Line 6 Line 6
 #      FORCE)  #      FORCE)
 #  endif()  #  endif()
 # SET (CMAKE_CONFIGURATION_TYPES "Debug;RelWithDebinfo" CACHE STRING "" FORCE)  # SET (CMAKE_CONFIGURATION_TYPES "Debug;RelWithDebinfo" CACHE STRING "" FORCE)
   set(PACKAGE_NAME "imach")
 SET(IMACH_VERSION_MAJOR 0)  SET(IMACH_VERSION_MAJOR 0)
 SET(IMACH_VERSION_MINOR 98q5)  SET(IMACH_VERSION_MINOR 99r11)
 SET(IMACH_VERSION_PATCH 0)  SET(IMACH_VERSION_PATCH 0)
 SET(IMACH_VERSION_NOTE "")  SET(IMACH_VERSION_NOTE "")
 SET(IMACH_VERSION ${IMACH_VERSION_MAJOR}.${IMACH_VERSION_MINOR})  SET(IMACH_VERSION ${IMACH_VERSION_MAJOR}.${IMACH_VERSION_MINOR})
   SET(@APPNAME@ IMaCh-${IMACH_VERSION_MAJOR}.${IMACH_VERSION_MINOR})
   SET(@NOTINNOREG@ )
   SET(@NOREG@ )
   SET(@IMACHSETUPVERSION@ imach-${IMACH_VERSION_MAJOR}.${IMACH_VERSION_MINOR}-icl-setup)
   SET(@APPCOMPILATIONMODE@ icl)
   SET(@VERSION@ ${IMACH_VERSION_MAJOR}.${IMACH_VERSION_MINOR})
   SET(@GNUPLOTVERSION@ 5.1)
   SET(@INFOBEFOREFILE@ README.txt)
   SET(@LICENSEFILE@ Copying)
   SET(@PACKAGE@ imach)
   SET(@DICTLANG@ en)
   SET(@VERMAJOR@ )
   SET(@COPYRIGHT@ "Copyright (C)  2002-2015 INED-EUROREVES-Institut de longevite-Japan Society for the Promotion of Science (Grant-in-Aid for Scientific Research 25293121) 2013-2016- Intel Software 2015-2018")
 #SET(IMACH_VERSION ${IMACH_VERSION_MAJOR}.${IMACH_VERSION_MINOR}.${IMACH_VERSION_PATCH})  #SET(IMACH_VERSION ${IMACH_VERSION_MAJOR}.${IMACH_VERSION_MINOR}.${IMACH_VERSION_PATCH})
 #MATH(EXPR IMACH_VERSION_NUMBER "100000*${IMACH_VERSION_MAJOR} + 100*${IMACH_VERSION_MINOR} + ${IMACH_VERSION_PATCH}")  #MATH(EXPR IMACH_VERSION_NUMBER "100000*${IMACH_VERSION_MAJOR} + 100*${IMACH_VERSION_MINOR} + ${IMACH_VERSION_PATCH}")
   
Line 21  CMAKE_MINIMUM_REQUIRED(VERSION 2.8.11) Line 35  CMAKE_MINIMUM_REQUIRED(VERSION 2.8.11)
   
 CONFIGURE_FILE(  CONFIGURE_FILE(
   "${PROJECT_SOURCE_DIR}/version.h.in"    "${PROJECT_SOURCE_DIR}/version.h.in"
   "${PROJECT_BINARY_DIR}/version.h"    "${PROJECT_SOURCE_DIR}/src/version.h"
   )    )
 CONFIGURE_FILE(  CONFIGURE_FILE(
   "${PROJECT_SOURCE_DIR}/config.h.in"    "${PROJECT_SOURCE_DIR}/config.h.in"
   "${PROJECT_BINARY_DIR}/config.h"    "${PROJECT_BINARY_DIR}/config.h"
 )  )
   # Examples for the documentation
   CONFIGURE_FILE("${PROJECT_SOURCE_DIR}/tests/mypar.imach.in" "html/doc/mypar.imach")
   CONFIGURE_FILE("${PROJECT_SOURCE_DIR}/tests/biaspar.imach.in" "html/doc/biaspar.imach")
   CONFIGURE_FILE("${PROJECT_SOURCE_DIR}/tests/data1.txt" "html/doc/data1.txt" COPYONLY)
   CONFIGURE_FILE("${PROJECT_SOURCE_DIR}/tests/data/mydata.txt" "html/doc/data/mydata.txt" COPYONLY)
   # Test files
   CONFIGURE_FILE("${PROJECT_SOURCE_DIR}/tests/data/data2.txt" "tests/data/data2.txt" COPYONLY)
   CONFIGURE_FILE("${PROJECT_SOURCE_DIR}/tests/testV2.imach" "tests/testV2.imach" COPYONLY)
   CONFIGURE_FILE("${PROJECT_SOURCE_DIR}/tests/testV1V2.imach" "tests/testV1V2.imach" COPYONLY)
   
   
 set (imach_SRCS ./src/imach.c)  set (imach_SRCS ./src/imach.c)
 SET( CMAKE_VERBOSE_MAKEFILE on )  SET( CMAKE_VERBOSE_MAKEFILE on )
 ADD_EXECUTABLE ( IMaCh-${IMACH_VERSION_MAJOR}.${IMACH_VERSION_MINOR} ${imach_SRCS})  ADD_EXECUTABLE ( IMaCh-${IMACH_VERSION_MAJOR}.${IMACH_VERSION_MINOR} ${imach_SRCS})
 INSTALL(TARGETS IMaCh-${IMACH_VERSION_MAJOR}.${IMACH_VERSION_MINOR} DESTINATION bin COMPONENT binaries )  INSTALL(TARGETS IMaCh-${IMACH_VERSION_MAJOR}.${IMACH_VERSION_MINOR} DESTINATION bin COMPONENT binaries )
 ADD_SUBDIRECTORY(html)  ADD_SUBDIRECTORY(html)
   ADD_SUBDIRECTORY(tests)
 ADD_SUBDIRECTORY(src)  ADD_SUBDIRECTORY(src)
 ADD_SUBDIRECTORY(distributions)  ADD_SUBDIRECTORY(distributions)
 #if (${WIN32})  #if (${WIN32})
   #if(APPLE)
   #  set(DOCDIR "${CMAKE_INSTALL_PREFIX}/${PROJECT_NAME}/doc")
   #endif()
 if(UNIX)  if(UNIX)
   #   set(CMAKE_CXX_COMPILER "gcc")    #   set(CMAKE_CXX_COMPILER "gcc")
   target_link_libraries(IMaCh-${IMACH_VERSION_MAJOR}.${IMACH_VERSION_MINOR} m)    target_link_libraries(IMaCh-${IMACH_VERSION_MAJOR}.${IMACH_VERSION_MINOR} m)
Line 48  if(UNIX) Line 76  if(UNIX)
   set(ICONDIR "${CMAKE_INSTALL_PREFIX}/share/icons")    set(ICONDIR "${CMAKE_INSTALL_PREFIX}/share/icons")
 endif()  endif()
 if(MSVC)  if(MSVC)
     set(DOCDIR "${CMAKE_INSTALL_PREFIX}/${PROJECT_NAME}/doc")
   set(CMAKE_C_FLAGS_DEBUG "${CMAKE_C_FLAGS_DEBUG} /MTd")    set(CMAKE_C_FLAGS_DEBUG "${CMAKE_C_FLAGS_DEBUG} /MTd")
   set(CMAKE_C_FLAGS_RELEASE "${CMAKE_C_FLAGS_RELEASE} /MT")    set(CMAKE_C_FLAGS_RELEASE "${CMAKE_C_FLAGS_RELEASE} /MT")
   set(CMAKE_C_FLAGS_DEBUG "${CMAKE_C_FLAGS_DEBUG} /MTd")    set(CMAKE_C_FLAGS_DEBUG "${CMAKE_C_FLAGS_DEBUG} /MTd")
Line 63  install(FILES "html/doc/biaspar.imach" D Line 92  install(FILES "html/doc/biaspar.imach" D
 install(FILES "html/doc/data1.txt" DESTINATION "${DOCDIR}")  install(FILES "html/doc/data1.txt" DESTINATION "${DOCDIR}")
 #install(FILES "html" DESTINATION "${DOCDIR}")  #install(FILES "html" DESTINATION "${DOCDIR}")
   
   
 set(CPACK_PACKAGE_VERSION ${IMACH_VERSION})  set(CPACK_PACKAGE_VERSION ${IMACH_VERSION})
 set(CPACK_PACKAGE_NAME "IMaCh")  set(CPACK_PACKAGE_NAME "imach")
 set(CPACK_PACKAGE_RELEASE 2)  set(CPACK_PACKAGE_RELEASE 1)
 set(CPACK_PACKAGE_CONTACT "Nicolas Brouard")  set(CPACK_PACKAGE_CONTACT "Nicolas Brouard")
 set(CPACK_PACKAGE_VENDOR "INED")  set(CPACK_PACKAGE_VENDOR "INED")
 SET(CPACK_PACKAGE_DESCRIPTION_SUMMARY "IMaCh Interpolated Markov Chain program")  SET(CPACK_PACKAGE_DESCRIPTION_SUMMARY "IMaCh Interpolated Markov Chain program")
Line 137  INCLUDE(CPack) Line 167  INCLUDE(CPack)
 # else()  # else()
 #   set(VERSION_PATCH "${BUILD_VERSION_PATCH}")  #   set(VERSION_PATCH "${BUILD_VERSION_PATCH}")
 # ENDIF()  # ENDIF()
   file( GLOB_RECURSE parameter_files RELATIVE
   "${CMAKE_CURRENT_SOURCE_DIR}/html/doc" "html/*.imach" )
   foreach( parameter_file ${parameter_files} )
     add_custom_command(
       OUTPUT "${CMAKE_CURRENT_BINARY_DIR}/${parameter_file}"
       COMMAND cmake -E copy
   "${CMAKE_CURRENT_SOURCE_DIR}/${parameter_file}"
   "${CMAKE_CURRENT_BINARY_DIR}/${parameter_file}"
       DEPENDS "${CMAKE_CURRENT_SOURCE_DIR}/${parameter_file}"
     )
     list( APPEND parameter_files_dest "${parameter_file}" )
   endforeach( parameter_file )
   
   #add_custom_target( CopyParameter ALL DEPENDS ${parameter_files_dest} )
 ENABLE_TESTING()  ENABLE_TESTING()
 SUBDIRS(html/doc)  ADD_SUBDIRECTORY(html/doc)
 SUBDIRS(html/doc/data)  ADD_SUBDIRECTORY(html/doc/data)
   install(FILES "${PROJECT_SOURCE_DIR}/html/doc/mypar.imach" DESTINATION "html/doc/mypar.imach")
   ADD_TEST(testV2.imach  IMaCh-${IMACH_VERSION} tests/testV2.imach )
   ADD_TEST(testV1V2.imach  IMaCh-${IMACH_VERSION} tests/testV1V2.imach )
 ADD_TEST(mypar  IMaCh-${IMACH_VERSION} html/doc/mypar.imach )  ADD_TEST(mypar  IMaCh-${IMACH_VERSION} html/doc/mypar.imach )
 ADD_TEST(biaspar  IMaCh-${IMACH_VERSION} html/doc/biaspar.imach )  ADD_TEST(biaspar  IMaCh-${IMACH_VERSION} html/doc/biaspar.imach )
 #SET(FAB "po" CACHE STRING "Some user-specified option")  #SET(FAB "po" CACHE STRING "Some user-specified option")
Line 195  ADD_TEST(biaspar  IMaCh-${IMACH_VERSION} Line 242  ADD_TEST(biaspar  IMaCh-${IMACH_VERSION}
 #   endif()  #   endif()
 # endif()  # endif()
 # Add a target to generate API documentation with Doxygen  # Add a target to generate API documentation with Doxygen
 find_package(Doxygen)  
 if(DOXYGEN_FOUND)  
 configure_file(${CMAKE_CURRENT_SOURCE_DIR}/latex/Doxyfile.in  
 ${CMAKE_CURRENT_BINARY_DIR}/latex/Doxyfile @ONLY)  
 add_custom_target(doc  
 ${DOXYGEN_EXECUTABLE} ${CMAKE_CURRENT_BINARY_DIR}/latex/Doxyfile  
 WORKING_DIRECTORY ${CMAKE_CURRENT_BINARY_DIR}/latex  
 COMMENT "Generating IMaCh documentation with Doxygen" VERBATIM  
 )  
 endif()  
   
   if(UNIX)
     find_package(Doxygen)
     if(DOXYGEN_FOUND)
       configure_file(${CMAKE_CURRENT_SOURCE_DIR}/latex/Doxyfile.in
         ${CMAKE_CURRENT_BINARY_DIR}/latex/Doxyfile @ONLY)
       add_custom_target(doc
         ${DOXYGEN_EXECUTABLE} ${CMAKE_CURRENT_BINARY_DIR}/latex/Doxyfile
         WORKING_DIRECTORY ${CMAKE_CURRENT_BINARY_DIR}/latex
         COMMENT "Generating IMaCh documentation with Doxygen" VERBATIM
         )
     endif()
   endif()
Removed from v.1.1  
changed lines
  Added in v.1.14

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