--- imach/html/doc/biaspar.gp	2006/02/09 15:20:33	1.3
+++ imach/html/doc/biaspar.gp	2015/08/18 16:43:19	1.5
@@ -1,245 +1,271 @@
-
-# Imach version 0.98b, January 2006, INED-EUROREVES 
-# biaspar.gp
-set missing 'NaNq'
-cd "C:/Program Files/IMaCh/doc/" 
-
-set out "biaspar/vbiaspar11.png" 
-
-#set out "vbiaspar11.png" 
-set xlabel "Age" 
-set ylabel "Probability" 
-set ter png small
-set size 0.65,0.65
-plot [70:95] "biaspar/vplrbiaspar.txt" every :::0::0 u 1:2 "%lf %lf (%lf) %*lf (%*lf)" t"Stable prevalence" w l 0,"biaspar/vplrbiaspar.txt" every :::0::0 u 1:($2+1.96*$3) "%lf %lf (%lf) %*lf (%*lf)" t"95% CI" w l 1,"biaspar/vplrbiaspar.txt" every :::0::0 u 1:($2-1.96*$3) "%lf %lf (%lf) %*lf (%*lf)" t"" w l 1,"biaspar/prbiaspar.txt" every :::0::0 u 1:($2) t"Observed prevalence " w l 2
-set out "biaspar/vbiaspar21.png" 
-
-#set out "vbiaspar21.png" 
-set xlabel "Age" 
-set ylabel "Probability" 
-set ter png small
-set size 0.65,0.65
-plot [70:95] "biaspar/vplrbiaspar.txt" every :::0::0 u 1:2 "%lf %*lf (%*lf) %lf (%lf)" t"Stable prevalence" w l 0,"biaspar/vplrbiaspar.txt" every :::0::0 u 1:($2+1.96*$3) "%lf %*lf (%*lf) %lf (%lf)" t"95% CI" w l 1,"biaspar/vplrbiaspar.txt" every :::0::0 u 1:($2-1.96*$3) "%lf %*lf (%*lf) %lf (%lf)" t"" w l 1,"biaspar/prbiaspar.txt" every :::0::0 u 1:($6) t"Observed prevalence " w l 2
-set out "biaspar/ebiaspar1.png" 
-set ylabel "Years" 
-set ter png small
-set size 0.65,0.65
-plot [70:95] "biaspar/trbiaspar.txt" every :::0::0 u 1:2 "%lf %lf (%lf) %*lf (%*lf) %*lf (%*lf)" t"TLE" w l ,"biaspar/trbiaspar.txt" every :::0::0 u 1:($2-$3*2) "%lf %lf (%lf) %*lf (%*lf) %*lf (%*lf)" t"" w l 0,"biaspar/trbiaspar.txt" every :::0::0 u 1:($2+$3*2) "%lf %lf (%lf) %*lf (%*lf) %*lf (%*lf)" t"" w l 0,"biaspar/trbiaspar.txt" every :::0::0 u 1:2 "%lf %*lf (%*lf) %lf (%lf) %*lf (%*lf)" t"LE in state (1)" w l ,"biaspar/trbiaspar.txt" every :::0::0 u 1:($2-$3*2) "%lf %*lf (%*lf) %lf (%lf) %*lf (%*lf)" t"" w l 0,"biaspar/trbiaspar.txt" every :::0::0 u 1:($2+$3*2) "%lf %*lf (%*lf) %lf (%lf) %*lf (%*lf)" t"" w l 0,"biaspar/trbiaspar.txt" every :::0::0 u 1:2 "%lf %*lf (%*lf) %*lf (%*lf) %lf (%lf)" t"LE in state (2)" w l ,"biaspar/trbiaspar.txt" every :::0::0 u 1:($2-$3*2) "%lf %*lf (%*lf) %*lf (%*lf) %lf (%lf)" t"" w l 0,"biaspar/trbiaspar.txt" every :::0::0 u 1:($2+$3*2) "%lf %*lf (%*lf) %*lf (%*lf) %lf (%lf)" t"" w l 0
-set out "biaspar/expbiaspar11.png" 
-set ter png small
-set size 0.65,0.65
-plot [70:95] "biaspar/erbiaspar.txt" every :::0::0 u 1:2 t "e11" w l ,"biaspar/erbiaspar.txt" every :::0::0 u 1:4 t "e12" w l
-set out "biaspar/expbiaspar21.png" 
-set ter png small
-set size 0.65,0.65
-plot [70:95] "biaspar/erbiaspar.txt" every :::0::0 u 1:6 t "e21" w l ,"biaspar/erbiaspar.txt" every :::0::0 u 1:8 t "e22" w l
-set out "biaspar/pbiaspar11.png" 
-set xlabel "Age" 
-set ylabel "Probability" 
-set ter png small
-set size 0.65,0.65
-unset log y
-plot [70:95] "biaspar/pijrbiaspar.txt" u ($1==1 ? ($3):1/0):($5/($4+$5)) t"prev(1,2)" w l,"biaspar/pijrbiaspar.txt" u ($1==1 ? ($3):1/0):($8/($7+$8)) t"prev(2,2)" w l
-
-set out "biaspar/pbiaspar21.png" 
-set xlabel "Age" 
-set ylabel "Probability" 
-set ter png small
-set size 0.65,0.65
-unset log y
-plot [70:95] "biaspar/pijrbiaspar.txt" u ($1==1 ? ($3):1/0):($6/($4+$5)) t"prev(2,3)" w l,"biaspar/pijrbiaspar.txt" u ($1==1 ? ($3):1/0):($12/($10+$11)) t"prev(3,3)" w l
-p1=-12.245240 
-p2=0.092358 
-p3=-10.671890 
-p4=0.060969 
-p5=-2.645345 
-p6=-0.022325 
-p7=-4.773317 
-p8=0.007859 
-
-set out "biaspar/pebiaspar11.png" 
-
-set title "Probability"
-
-set ter png small
-set size 0.65,0.65
-set log y
-plot  [70:95]  exp(p1+p2*x)/(1+exp(p1+p2*x)+exp(p3+p4*x)) t "p12" , exp(p3+p4*x)/(1+exp(p1+p2*x)+exp(p3+p4*x)) t "p13" , exp(p5+p6*x)/(1+exp(p5+p6*x)+exp(p7+p8*x)) t "p21" , exp(p7+p8*x)/(1+exp(p5+p6*x)+exp(p7+p8*x)) t "p23" 
-set out "biaspar/pebiaspar12.png" 
-
-set ylabel "Quasi-incidence per year"
-
-set ter png small
-set size 0.65,0.65
-set log y
-plot  [70:95]  12.000000*exp(p1+p2*x)/(1+exp(p1+p2*x)+exp(p3+p4*x)) t "p12" , 12.000000*exp(p3+p4*x)/(1+exp(p1+p2*x)+exp(p3+p4*x)) t "p13" , 12.000000*exp(p5+p6*x)/(1+exp(p5+p6*x)+exp(p7+p8*x)) t "p21" , 12.000000*exp(p7+p8*x)/(1+exp(p5+p6*x)+exp(p7+p8*x)) t "p23" 
-# Routine varprob
-set parametric;unset label
-set log y;set log x; set xlabel "p13 (year-1)";set ylabel "p12 (year-1)"
-set ter png small
-set size 0.65,0.65
-set out "biaspar/varpijgrbiaspar113-12.png"
-set label "65" at  1.459e-002, 2.328e-002 center
-# Age 65, p13 - p12
-plot [-pi:pi]  1.459e-002+ 2.000*( 7.081e-001* 2.074e-003*cos(t)+ 7.061e-001* 1.411e-003*sin(t)),  2.328e-002 +2.000*(-7.061e-001* 2.074e-003*cos(t)+ 7.081e-001* 1.411e-003*sin(t)) not
-# Age 70, p13 - p12
-set label "70" at  1.976e-002, 3.688e-002 center
-replot  1.976e-002+ 2.000*( 5.375e-001* 2.333e-003*cos(t)+ 8.433e-001* 1.486e-003*sin(t)),  3.688e-002 +2.000*(-8.433e-001* 2.333e-003*cos(t)+ 5.375e-001* 1.486e-003*sin(t)) not
-# Age 75, p13 - p12
-set label "75" at  2.674e-002, 5.839e-002 center
-replot  2.674e-002+ 2.000*( 4.212e-001* 2.525e-003*cos(t)+ 9.070e-001* 1.399e-003*sin(t)),  5.839e-002 +2.000*(-9.070e-001* 2.525e-003*cos(t)+ 4.212e-001* 1.399e-003*sin(t)) not
-# Age 80, p13 - p12
-set label "80" at  3.614e-002, 9.233e-002 center
-replot  3.614e-002+ 2.000*( 3.981e-001* 2.739e-003*cos(t)+ 9.173e-001* 1.383e-003*sin(t)),  9.233e-002 +2.000*(-9.173e-001* 2.739e-003*cos(t)+ 3.981e-001* 1.383e-003*sin(t)) not
-# Age 85, p13 - p12
-set label "85" at  4.875e-002, 1.457e-001 center
-replot  4.875e-002+ 2.000*( 3.975e-001* 4.130e-003*cos(t)+ 9.176e-001* 2.278e-003*sin(t)),  1.457e-001 +2.000*(-9.176e-001* 4.130e-003*cos(t)+ 3.975e-001* 2.278e-003*sin(t)) not
-# Age 90, p13 - p12
-set label "90" at  6.557e-002, 2.292e-001 center
-replot  6.557e-002+ 2.000*( 2.928e-001* 8.973e-003*cos(t)+ 9.562e-001* 4.707e-003*sin(t)),  2.292e-001 +2.000*(-9.562e-001* 8.973e-003*cos(t)+ 2.928e-001* 4.707e-003*sin(t)) not
-# Age 95, p13 - p12
-set label "95" at  8.778e-002, 3.591e-001 center
-replot  8.778e-002+ 2.000*( 2.165e-001* 1.969e-002*cos(t)+ 9.763e-001* 8.913e-003*sin(t)),  3.591e-001 +2.000*(-9.763e-001* 1.969e-002*cos(t)+ 2.165e-001* 8.913e-003*sin(t)) not
-set out "biaspar/varpijgrbiaspar113-12.png";replot;
-set parametric;unset label
-set log y;set log x; set xlabel "p21 (year-1)";set ylabel "p12 (year-1)"
-set ter png small
-set size 0.65,0.65
-set out "biaspar/varpijgrbiaspar121-12.png"
-set label "65" at  1.936e-001, 2.328e-002 center
-# Age 65, p21 - p12
-plot [-pi:pi]  1.936e-001+ 2.000*( 9.998e-001* 3.139e-002*cos(t)+-1.878e-002* 1.672e-003*sin(t)),  2.328e-002 +2.000*( 1.878e-002* 3.139e-002*cos(t)+ 9.998e-001* 1.672e-003*sin(t)) not
-# Age 70, p21 - p12
-set label "70" at  1.734e-001, 3.688e-002 center
-replot  1.734e-001+ 2.000*( 9.995e-001* 2.153e-002*cos(t)+-3.254e-002* 2.005e-003*sin(t)),  3.688e-002 +2.000*( 3.254e-002* 2.153e-002*cos(t)+ 9.995e-001* 2.005e-003*sin(t)) not
-# Age 75, p21 - p12
-set label "75" at  1.552e-001, 5.839e-002 center
-replot  1.552e-001+ 2.000*( 9.984e-001* 1.374e-002*cos(t)+-5.600e-002* 2.239e-003*sin(t)),  5.839e-002 +2.000*( 5.600e-002* 1.374e-002*cos(t)+ 9.984e-001* 2.239e-003*sin(t)) not
-# Age 80, p21 - p12
-set label "80" at  1.389e-001, 9.233e-002 center
-replot  1.389e-001+ 2.000*( 9.950e-001* 8.279e-003*cos(t)+-9.943e-002* 2.449e-003*sin(t)),  9.233e-002 +2.000*( 9.943e-002* 8.279e-003*cos(t)+ 9.950e-001* 2.449e-003*sin(t)) not
-# Age 85, p21 - p12
-set label "85" at  1.243e-001, 1.457e-001 center
-replot  1.243e-001+ 2.000*( 9.670e-001* 6.440e-003*cos(t)+-2.549e-001* 3.655e-003*sin(t)),  1.457e-001 +2.000*( 2.549e-001* 6.440e-003*cos(t)+ 9.670e-001* 3.655e-003*sin(t)) not
-# Age 90, p21 - p12
-set label "90" at  1.112e-001, 2.292e-001 center
-replot  1.112e-001+ 2.000*( 5.855e-001* 9.526e-003*cos(t)+-8.106e-001* 6.807e-003*sin(t)),  2.292e-001 +2.000*( 8.106e-001* 9.526e-003*cos(t)+ 5.855e-001* 6.807e-003*sin(t)) not
-# Age 95, p21 - p12
-set label "95" at  9.952e-002, 3.591e-001 center
-replot  9.952e-002+ 2.000*( 2.226e-001* 1.969e-002*cos(t)+-9.749e-001* 9.591e-003*sin(t)),  3.591e-001 +2.000*( 9.749e-001* 1.969e-002*cos(t)+ 2.226e-001* 9.591e-003*sin(t)) not
-set out "biaspar/varpijgrbiaspar121-12.png";replot;
-set parametric;unset label
-set log y;set log x; set xlabel "p23 (year-1)";set ylabel "p12 (year-1)"
-set ter png small
-set size 0.65,0.65
-set out "biaspar/varpijgrbiaspar123-12.png"
-set label "65" at  1.640e-001, 2.328e-002 center
-# Age 65, p23 - p12
-plot [-pi:pi]  1.640e-001+ 2.000*( 9.995e-001* 2.122e-002*cos(t)+-3.110e-002* 1.646e-003*sin(t)),  2.328e-002 +2.000*( 3.110e-002* 2.122e-002*cos(t)+ 9.995e-001* 1.646e-003*sin(t)) not
-# Age 70, p23 - p12
-set label "70" at  1.708e-001, 3.688e-002 center
-replot  1.708e-001+ 2.000*( 9.988e-001* 1.755e-002*cos(t)+-4.814e-002* 1.950e-003*sin(t)),  3.688e-002 +2.000*( 4.814e-002* 1.755e-002*cos(t)+ 9.988e-001* 1.950e-003*sin(t)) not
-# Age 75, p23 - p12
-set label "75" at  1.778e-001, 5.839e-002 center
-replot  1.778e-001+ 2.000*( 9.972e-001* 1.375e-002*cos(t)+-7.534e-002* 2.131e-003*sin(t)),  5.839e-002 +2.000*( 7.534e-002* 1.375e-002*cos(t)+ 9.972e-001* 2.131e-003*sin(t)) not
-# Age 80, p23 - p12
-set label "80" at  1.851e-001, 9.233e-002 center
-replot  1.851e-001+ 2.000*( 9.926e-001* 1.011e-002*cos(t)+-1.215e-001* 2.277e-003*sin(t)),  9.233e-002 +2.000*( 1.215e-001* 1.011e-002*cos(t)+ 9.926e-001* 2.277e-003*sin(t)) not
-# Age 85, p23 - p12
-set label "85" at  1.926e-001, 1.457e-001 center
-replot  1.926e-001+ 2.000*( 9.723e-001* 7.665e-003*cos(t)+-2.338e-001* 3.559e-003*sin(t)),  1.457e-001 +2.000*( 2.338e-001* 7.665e-003*cos(t)+ 9.723e-001* 3.559e-003*sin(t)) not
-# Age 90, p23 - p12
-set label "90" at  2.004e-001, 2.292e-001 center
-replot  2.004e-001+ 2.000*( 6.216e-001* 9.497e-003*cos(t)+-7.833e-001* 7.226e-003*sin(t)),  2.292e-001 +2.000*( 7.833e-001* 9.497e-003*cos(t)+ 6.216e-001* 7.226e-003*sin(t)) not
-# Age 95, p23 - p12
-set label "95" at  2.085e-001, 3.591e-001 center
-replot  2.085e-001+ 2.000*( 2.331e-001* 1.967e-002*cos(t)+-9.725e-001* 1.154e-002*sin(t)),  3.591e-001 +2.000*( 9.725e-001* 1.967e-002*cos(t)+ 2.331e-001* 1.154e-002*sin(t)) not
-set out "biaspar/varpijgrbiaspar123-12.png";replot;
-set parametric;unset label
-set log y;set log x; set xlabel "p21 (year-1)";set ylabel "p13 (year-1)"
-set ter png small
-set size 0.65,0.65
-set out "biaspar/varpijgrbiaspar121-13.png"
-set label "65" at  1.936e-001, 1.459e-002 center
-# Age 65, p21 - p13
-plot [-pi:pi]  1.936e-001+ 2.000*( 1.000e+000* 3.138e-002*cos(t)+-2.829e-003* 1.772e-003*sin(t)),  1.459e-002 +2.000*( 2.829e-003* 3.138e-002*cos(t)+ 1.000e+000* 1.772e-003*sin(t)) not
-# Age 70, p21 - p13
-set label "70" at  1.734e-001, 1.976e-002 center
-replot  1.734e-001+ 2.000*( 1.000e+000* 2.152e-002*cos(t)+-3.296e-003* 1.771e-003*sin(t)),  1.976e-002 +2.000*( 3.296e-003* 2.152e-002*cos(t)+ 1.000e+000* 1.771e-003*sin(t)) not
-# Age 75, p21 - p13
-set label "75" at  1.552e-001, 2.674e-002 center
-replot  1.552e-001+ 2.000*( 1.000e+000* 1.372e-002*cos(t)+-3.023e-003* 1.655e-003*sin(t)),  2.674e-002 +2.000*( 3.023e-003* 1.372e-002*cos(t)+ 1.000e+000* 1.655e-003*sin(t)) not
-# Age 80, p21 - p13
-set label "80" at  1.389e-001, 3.614e-002 center
-replot  1.389e-001+ 2.000*( 1.000e+000* 8.242e-003*cos(t)+-4.787e-003* 1.672e-003*sin(t)),  3.614e-002 +2.000*( 4.787e-003* 8.242e-003*cos(t)+ 1.000e+000* 1.672e-003*sin(t)) not
-# Age 85, p21 - p13
-set label "85" at  1.243e-001, 4.875e-002 center
-replot  1.243e-001+ 2.000*( 9.991e-001* 6.301e-003*cos(t)+-4.129e-002* 2.647e-003*sin(t)),  4.875e-002 +2.000*( 4.129e-002* 6.301e-003*cos(t)+ 9.991e-001* 2.647e-003*sin(t)) not
-# Age 90, p21 - p13
-set label "90" at  1.112e-001, 6.557e-002 center
-replot  1.112e-001+ 2.000*( 9.920e-001* 7.882e-003*cos(t)+-1.263e-001* 5.157e-003*sin(t)),  6.557e-002 +2.000*( 1.263e-001* 7.882e-003*cos(t)+ 9.920e-001* 5.157e-003*sin(t)) not
-# Age 95, p21 - p13
-set label "95" at  9.952e-002, 8.778e-002 center
-replot  9.952e-002+ 2.000*( 8.713e-001* 1.061e-002*cos(t)+-4.908e-001* 9.377e-003*sin(t)),  8.778e-002 +2.000*( 4.908e-001* 1.061e-002*cos(t)+ 8.713e-001* 9.377e-003*sin(t)) not
-set out "biaspar/varpijgrbiaspar121-13.png";replot;
-set parametric;unset label
-set log y;set log x; set xlabel "p23 (year-1)";set ylabel "p13 (year-1)"
-set ter png small
-set size 0.65,0.65
-set out "biaspar/varpijgrbiaspar123-13.png"
-set label "65" at  1.640e-001, 1.459e-002 center
-# Age 65, p23 - p13
-plot [-pi:pi]  1.640e-001+ 2.000*( 9.992e-001* 2.122e-002*cos(t)+ 3.961e-002* 1.564e-003*sin(t)),  1.459e-002 +2.000*(-3.961e-002* 2.122e-002*cos(t)+ 9.992e-001* 1.564e-003*sin(t)) not
-# Age 70, p23 - p13
-set label "70" at  1.708e-001, 1.976e-002 center
-replot  1.708e-001+ 2.000*( 9.987e-001* 1.755e-002*cos(t)+ 5.131e-002* 1.529e-003*sin(t)),  1.976e-002 +2.000*(-5.131e-002* 1.755e-002*cos(t)+ 9.987e-001* 1.529e-003*sin(t)) not
-# Age 75, p23 - p13
-set label "75" at  1.778e-001, 2.674e-002 center
-replot  1.778e-001+ 2.000*( 9.977e-001* 1.374e-002*cos(t)+ 6.811e-002* 1.369e-003*sin(t)),  2.674e-002 +2.000*(-6.811e-002* 1.374e-002*cos(t)+ 9.977e-001* 1.369e-003*sin(t)) not
-# Age 80, p23 - p13
-set label "80" at  1.851e-001, 3.614e-002 center
-replot  1.851e-001+ 2.000*( 9.950e-001* 1.009e-002*cos(t)+ 1.004e-001* 1.338e-003*sin(t)),  3.614e-002 +2.000*(-1.004e-001* 1.009e-002*cos(t)+ 9.950e-001* 1.338e-003*sin(t)) not
-# Age 85, p23 - p13
-set label "85" at  1.926e-001, 4.875e-002 center
-replot  1.926e-001+ 2.000*( 9.803e-001* 7.637e-003*cos(t)+ 1.977e-001* 2.231e-003*sin(t)),  4.875e-002 +2.000*(-1.977e-001* 7.637e-003*cos(t)+ 9.803e-001* 2.231e-003*sin(t)) not
-# Age 90, p23 - p13
-set label "90" at  2.004e-001, 6.557e-002 center
-replot  2.004e-001+ 2.000*( 9.247e-001* 8.660e-003*cos(t)+ 3.806e-001* 4.366e-003*sin(t)),  6.557e-002 +2.000*(-3.806e-001* 8.660e-003*cos(t)+ 9.247e-001* 4.366e-003*sin(t)) not
-# Age 95, p23 - p13
-set label "95" at  2.085e-001, 8.778e-002 center
-replot  2.085e-001+ 2.000*( 8.590e-001* 1.328e-002*cos(t)+ 5.121e-001* 8.035e-003*sin(t)),  8.778e-002 +2.000*(-5.121e-001* 1.328e-002*cos(t)+ 8.590e-001* 8.035e-003*sin(t)) not
-set out "biaspar/varpijgrbiaspar123-13.png";replot;
-set parametric;unset label
-set log y;set log x; set xlabel "p23 (year-1)";set ylabel "p21 (year-1)"
-set ter png small
-set size 0.65,0.65
-set out "biaspar/varpijgrbiaspar123-21.png"
-set label "65" at  1.640e-001, 1.936e-001 center
-# Age 65, p23 - p21
-plot [-pi:pi]  1.640e-001+ 2.000*( 5.483e-002* 3.141e-002*cos(t)+ 9.985e-001* 2.117e-002*sin(t)),  1.936e-001 +2.000*(-9.985e-001* 3.141e-002*cos(t)+ 5.483e-002* 2.117e-002*sin(t)) not
-# Age 70, p23 - p21
-set label "70" at  1.708e-001, 1.734e-001 center
-replot  1.708e-001+ 2.000*( 9.437e-002* 2.155e-002*cos(t)+ 9.955e-001* 1.749e-002*sin(t)),  1.734e-001 +2.000*(-9.955e-001* 2.155e-002*cos(t)+ 9.437e-002* 1.749e-002*sin(t)) not
-# Age 75, p23 - p21
-set label "75" at  1.778e-001, 1.552e-001 center
-replot  1.778e-001+ 2.000*( 7.002e-001* 1.395e-002*cos(t)+ 7.140e-001* 1.347e-002*sin(t)),  1.552e-001 +2.000*(-7.140e-001* 1.395e-002*cos(t)+ 7.002e-001* 1.347e-002*sin(t)) not
-# Age 80, p23 - p21
-set label "80" at  1.851e-001, 1.389e-001 center
-replot  1.851e-001+ 2.000*( 9.962e-001* 1.005e-002*cos(t)+ 8.694e-002* 8.227e-003*sin(t)),  1.389e-001 +2.000*(-8.694e-002* 1.005e-002*cos(t)+ 9.962e-001* 8.227e-003*sin(t)) not
-# Age 85, p23 - p21
-set label "85" at  1.926e-001, 1.243e-001 center
-replot  1.926e-001+ 2.000*( 9.869e-001* 7.529e-003*cos(t)+ 1.612e-001* 6.261e-003*sin(t)),  1.243e-001 +2.000*(-1.612e-001* 7.529e-003*cos(t)+ 9.869e-001* 6.261e-003*sin(t)) not
-# Age 90, p23 - p21
-set label "90" at  2.004e-001, 1.112e-001 center
-replot  2.004e-001+ 2.000*( 8.505e-001* 8.378e-003*cos(t)+ 5.260e-001* 7.632e-003*sin(t)),  1.112e-001 +2.000*(-5.260e-001* 8.378e-003*cos(t)+ 8.505e-001* 7.632e-003*sin(t)) not
-# Age 95, p23 - p21
-set label "95" at  2.085e-001, 9.952e-002 center
-replot  2.085e-001+ 2.000*( 9.743e-001* 1.222e-002*cos(t)+ 2.251e-001* 1.022e-002*sin(t)),  9.952e-002 +2.000*(-2.251e-001* 1.222e-002*cos(t)+ 9.743e-001* 1.022e-002*sin(t)) not
-set out "biaspar/varpijgrbiaspar123-21.png";replot;
-# Routine varevsij
-set noparametric;set nolabel; set ter png small;set size 0.65, 0.65
- set log y; set nolog x;set xlabel "Age"; set ylabel "Force of mortality (year-1)";
- plot "biaspar/prmorprev1-stablbased-rbiaspar.txt"  u 1:($3) not w l 1 
- replot "biaspar/prmorprev1-stablbased-rbiaspar.txt"  u 1:(($3+1.96*$4)) t "95% interval" w l 2 
- replot "biaspar/prmorprev1-stablbased-rbiaspar.txt"  u 1:(($3-1.96*$4)) not w l 2 
-set out "biaspar/varmuptjgr-stablbased-biaspar1.png";replot;
+
+# Imach version 0.98q5, August 2015,INED-EUROREVES-Institut de longevite-Japan Society for the Promotion of Science (Grant-in-Aid for Scientific Research 25293121), Intel Software 2015
+# biaspar.gp
+set datafile missing 'NaNq'
+cd "/Users/nbrouard/Documents/imach/cvs/imach/build/osx/html/doc" 
+
+# 1st: Period (stable) prevalence with CI: 'vpl' files
+
+set out "biaspar/vbiaspar1_1.png" 
+
+#set out "vbiaspar1_1.png" 
+set xlabel "Age" 
+set ylabel "Probability" 
+set ter png small size 320, 240
+plot [70:95] "biaspar/vplrbiaspar.txt" every :::0::0 u 1:2 "%lf %lf (%lf) %*lf (%*lf)" t"Period (stable) prevalence" w l lt 0,"biaspar/vplrbiaspar.txt" every :::0::0 u 1:($2+1.96*$3) "%lf %lf (%lf) %*lf (%*lf)" t"95% CI" w l lt 1,"biaspar/vplrbiaspar.txt" every :::0::0 u 1:($2-1.96*$3) "%lf %lf (%lf) %*lf (%*lf)" t"" w l lt 1,"biaspar/prbiaspar.txt" every :::0::0 u 1:($2) t"Observed prevalence " w l lt 2
+set out "biaspar/vbiaspar2_1.png" 
+
+#set out "vbiaspar2_1.png" 
+set xlabel "Age" 
+set ylabel "Probability" 
+set ter png small size 320, 240
+plot [70:95] "biaspar/vplrbiaspar.txt" every :::0::0 u 1:2 "%lf %*lf (%*lf) %lf (%lf)" t"Period (stable) prevalence" w l lt 0,"biaspar/vplrbiaspar.txt" every :::0::0 u 1:($2+1.96*$3) "%lf %*lf (%*lf) %lf (%lf)" t"95% CI" w l lt 1,"biaspar/vplrbiaspar.txt" every :::0::0 u 1:($2-1.96*$3) "%lf %*lf (%*lf) %lf (%lf)" t"" w l lt 1,"biaspar/prbiaspar.txt" every :::0::0 u 1:($6) t"Observed prevalence " w l lt 2
+# 2nd: Total life expectancy with CI: 't' files
+
+set out "biaspar/ebiaspar1.png" 
+set ylabel "Years" 
+set ter png small size 320, 240
+plot [70:95] "biaspar/trbiaspar.txt" every :::0::0 u 1:2 "%lf %lf (%lf) %*lf (%*lf) %*lf (%*lf)" t"TLE" w l ,"biaspar/trbiaspar.txt" every :::0::0 u 1:($2-$3*2) "%lf %lf (%lf) %*lf (%*lf) %*lf (%*lf)" t"" w l lt 0,"biaspar/trbiaspar.txt" every :::0::0 u 1:($2+$3*2) "%lf %lf (%lf) %*lf (%*lf) %*lf (%*lf)" t"" w l lt 0,"biaspar/trbiaspar.txt" every :::0::0 u 1:2 "%lf %*lf (%*lf) %lf (%lf) %*lf (%*lf)" t"LE in state (1)" w l ,"biaspar/trbiaspar.txt" every :::0::0 u 1:($2-$3*2) "%lf %*lf (%*lf) %lf (%lf) %*lf (%*lf)" t"" w l lt 0,"biaspar/trbiaspar.txt" every :::0::0 u 1:($2+$3*2) "%lf %*lf (%*lf) %lf (%lf) %*lf (%*lf)" t"" w l lt 0,"biaspar/trbiaspar.txt" every :::0::0 u 1:2 "%lf %*lf (%*lf) %*lf (%*lf) %lf (%lf)" t"LE in state (2)" w l ,"biaspar/trbiaspar.txt" every :::0::0 u 1:($2-$3*2) "%lf %*lf (%*lf) %*lf (%*lf) %lf (%lf)" t"" w l lt 0,"biaspar/trbiaspar.txt" every :::0::0 u 1:($2+$3*2) "%lf %*lf (%*lf) %*lf (%*lf) %lf (%lf)" t"" w l lt 0
+set out "biaspar/expbiaspar11.png" 
+set ter png small size 320, 240
+plot [70:95] "biaspar/erbiaspar.txt" every :::0::0 u 1:2 t "e11" w l ,"biaspar/erbiaspar.txt" every :::0::0 u 1:3 t "e12" w l ,"biaspar/erbiaspar.txt" every :::0::0 u 1:4 t "e1." w l
+set out "biaspar/expbiaspar21.png" 
+set ter png small size 320, 240
+plot [70:95] "biaspar/erbiaspar.txt" every :::0::0 u 1:5 t "e21" w l ,"biaspar/erbiaspar.txt" every :::0::0 u 1:6 t "e22" w l ,"biaspar/erbiaspar.txt" every :::0::0 u 1:7 t "e2." w l
+#
+#
+#CV preval stable (period): 'pij' files, cov=1 state=1
+set out "biaspar/pbiaspar1_1.png" 
+set xlabel "Age" 
+set ylabel "Probability" 
+set ter png small size 320, 240
+unset log y
+plot [70:95]  "biaspar/pijrbiaspar.txt" u ($1==1 ? ($3):1/0):($4/($4+$5)) t "prev(1,1)" w l, ''  u ($1==1 ? ($3):1/0):($7/($7+$8)) t "prev(2,1)" w l
+
+#
+#
+#CV preval stable (period): 'pij' files, cov=1 state=2
+set out "biaspar/pbiaspar2_1.png" 
+set xlabel "Age" 
+set ylabel "Probability" 
+set ter png small size 320, 240
+unset log y
+plot [70:95]  "biaspar/pijrbiaspar.txt" u ($1==1 ? ($3):1/0):($5/($4+$5)) t "prev(1,2)" w l, ''  u ($1==1 ? ($3):1/0):($8/($7+$8)) t "prev(2,2)" w l
+
+##############
+#MLE estimated parameters
+#############
+# initial state 1
+#   current state 2
+p1=-12.202711; p2=0.091764; 
+#   current state 3
+p3=-10.299238; p4=0.056626; 
+# initial state 2
+#   current state 1
+p5=-1.545619; p6=-0.035395; 
+#   current state 3
+p7=-5.565963; p8=0.016951; 
+##############
+#
+
+##############
+#Graphics of of probabilities or incidences
+#############
+# logi(p12/p11)=a12+b12*age+c12age*age+d12*V1+e12*V1*age
+# logi(p12/p11)=p1 +p2*age +p3*age*age+ p4*V1+ p5*V1*age
+# logi(p13/p11)=a13+b13*age+c13age*age+d13*V1+e13*V1*age
+# logi(p13/p11)=p6 +p7*age +p8*age*age+ p9*V1+ p10*V1*age
+# p12+p13+p14+p11=1=p11(1+exp(a12+b12*age+c12age*age+d12*V1+e12*V1*age)
+#                      +exp(a13+b13*age+c13age*age+d13*V1+e13*V1*age)+...)
+# p11=1/(1+exp(a12+b12*age+c12age*age+d12*V1+e12*V1*age)
+#                      +exp(a13+b13*age+c13age*age+d13*V1+e13*V1*age)+...)
+# p12=exp(a12+b12*age+c12age*age+d12*V1+e12*V1*age)/
+#     (1+exp(a12+b12*age+c12age*age+d12*V1+e12*V1*age)
+#       +exp(a13+b13*age+c13age*age+d13*V1+e13*V1*age))
+#       +exp(a14+b14*age+c14age*age+d14*V1+e14*V1*age)+...)
+#
+# ng=1
+#   jk=1 to 2^0=1
+#    jk=1
+
+set out "biaspar/pebiaspar1_1.png" 
+
+set title "Probability"
+
+set ter png small size 320, 240
+set log y
+plot  [70:95]  exp(p1+p2*x)/(1+exp(p1+p2*x)+exp(p3+p4*x)) t "p12" , exp(p3+p4*x)/(1+exp(p1+p2*x)+exp(p3+p4*x)) t "p13" , exp(p5+p6*x)/(1+exp(p5+p6*x)+exp(p7+p8*x)) t "p21" , exp(p7+p8*x)/(1+exp(p5+p6*x)+exp(p7+p8*x)) t "p23" # ng=2
+#   jk=1 to 2^0=1
+#    jk=1
+
+set out "biaspar/pebiaspar1_2.png" 
+
+set ylabel "Quasi-incidence per year"
+
+set ter png small size 320, 240
+set log y
+plot  [70:95]  12.000000*exp(p1+p2*x)/(1+exp(p1+p2*x)+exp(p3+p4*x)) t "p12" , 12.000000*exp(p3+p4*x)/(1+exp(p1+p2*x)+exp(p3+p4*x)) t "p13" , 12.000000*exp(p5+p6*x)/(1+exp(p5+p6*x)+exp(p7+p8*x)) t "p21" , 12.000000*exp(p7+p8*x)/(1+exp(p5+p6*x)+exp(p7+p8*x)) t "p23" 
+# Routine varprob
+set parametric;unset label
+set log y;set log x; set xlabel "p13 (year-1)";set ylabel "p12 (year-1)"
+set ter png small size 320, 240
+set out "biaspar/varpijgrbiaspar113-12.png"
+set label "65" at   1.597e-02,  2.337e-02 center
+# Age 65, p13 - p12
+plot [-pi:pi]   1.597e-02+ 2.000*(  7.325e-01*  2.084e-03*cos(t)+  6.807e-01*  1.465e-03*sin(t)),   2.337e-02 +2.000*( -6.807e-01*  2.084e-03*cos(t)+  7.325e-01*  1.465e-03*sin(t)) not
+# Age 70, p13 - p12
+set label "70" at   2.117e-02,  3.691e-02 center
+replot   2.117e-02+ 2.000*(  5.240e-01*  2.315e-03*cos(t)+  8.517e-01*  1.521e-03*sin(t)),   3.691e-02 +2.000*( -8.517e-01*  2.315e-03*cos(t)+  5.240e-01*  1.521e-03*sin(t)) not
+# Age 75, p13 - p12
+set label "75" at   2.803e-02,  5.827e-02 center
+replot   2.803e-02+ 2.000*(  3.929e-01*  2.501e-03*cos(t)+  9.196e-01*  1.403e-03*sin(t)),   5.827e-02 +2.000*( -9.196e-01*  2.501e-03*cos(t)+  3.929e-01*  1.403e-03*sin(t)) not
+# Age 80, p13 - p12
+set label "80" at   3.707e-02,  9.186e-02 center
+replot   3.707e-02+ 2.000*(  3.828e-01*  2.718e-03*cos(t)+  9.238e-01*  1.387e-03*sin(t)),   9.186e-02 +2.000*( -9.238e-01*  2.718e-03*cos(t)+  3.828e-01*  1.387e-03*sin(t)) not
+# Age 85, p13 - p12
+set label "85" at   4.893e-02,  1.445e-01 center
+replot   4.893e-02+ 2.000*(  4.026e-01*  4.082e-03*cos(t)+  9.154e-01*  2.265e-03*sin(t)),   1.445e-01 +2.000*( -9.154e-01*  4.082e-03*cos(t)+  4.026e-01*  2.265e-03*sin(t)) not
+# Age 90, p13 - p12
+set label "90" at   6.441e-02,  2.268e-01 center
+replot   6.441e-02+ 2.000*(  2.874e-01*  8.787e-03*cos(t)+  9.578e-01*  4.578e-03*sin(t)),   2.268e-01 +2.000*( -9.578e-01*  8.787e-03*cos(t)+  2.874e-01*  4.578e-03*sin(t)) not
+# Age 95, p13 - p12
+set label "95" at   8.441e-02,  3.543e-01 center
+replot   8.441e-02+ 2.000*(  2.019e-01*  1.921e-02*cos(t)+  9.794e-01*  8.453e-03*sin(t)),   3.543e-01 +2.000*( -9.794e-01*  1.921e-02*cos(t)+  2.019e-01*  8.453e-03*sin(t)) not
+set out "biaspar/varpijgrbiaspar113-12.png";replot;
+set parametric;unset label
+set log y;set log x; set xlabel "p21 (year-1)";set ylabel "p12 (year-1)"
+set ter png small size 320, 240
+set out "biaspar/varpijgrbiaspar121-12.png"
+set label "65" at   2.481e-01,  2.337e-02 center
+# Age 65, p21 - p12
+plot [-pi:pi]   2.481e-01+ 2.000*(  9.999e-01*  3.884e-02*cos(t)+ -1.528e-02*  1.677e-03*sin(t)),   2.337e-02 +2.000*(  1.528e-02*  3.884e-02*cos(t)+  9.999e-01*  1.677e-03*sin(t)) not
+# Age 70, p21 - p12
+set label "70" at   2.084e-01,  3.691e-02 center
+replot   2.084e-01+ 2.000*(  9.996e-01*  2.493e-02*cos(t)+ -2.848e-02*  2.005e-03*sin(t)),   3.691e-02 +2.000*(  2.848e-02*  2.493e-02*cos(t)+  9.996e-01*  2.005e-03*sin(t)) not
+# Age 75, p21 - p12
+set label "75" at   1.749e-01,  5.827e-02 center
+replot   1.749e-01+ 2.000*(  9.986e-01*  1.487e-02*cos(t)+ -5.306e-02*  2.233e-03*sin(t)),   5.827e-02 +2.000*(  5.306e-02*  1.487e-02*cos(t)+  9.986e-01*  2.233e-03*sin(t)) not
+# Age 80, p21 - p12
+set label "80" at   1.467e-01,  9.186e-02 center
+replot   1.467e-01+ 2.000*(  9.949e-01*  8.452e-03*cos(t)+ -1.006e-01*  2.434e-03*sin(t)),   9.186e-02 +2.000*(  1.006e-01*  8.452e-03*cos(t)+  9.949e-01*  2.434e-03*sin(t)) not
+# Age 85, p21 - p12
+set label "85" at   1.230e-01,  1.445e-01 center
+replot   1.230e-01+ 2.000*(  9.691e-01*  6.397e-03*cos(t)+ -2.468e-01*  3.619e-03*sin(t)),   1.445e-01 +2.000*(  2.468e-01*  6.397e-03*cos(t)+  9.691e-01*  3.619e-03*sin(t)) not
+# Age 90, p21 - p12
+set label "90" at   1.031e-01,  2.268e-01 center
+replot   1.031e-01+ 2.000*(  5.313e-01*  9.166e-03*cos(t)+ -8.472e-01*  6.591e-03*sin(t)),   2.268e-01 +2.000*(  8.472e-01*  9.166e-03*cos(t)+  5.313e-01*  6.591e-03*sin(t)) not
+# Age 95, p21 - p12
+set label "95" at   8.634e-02,  3.543e-01 center
+replot   8.634e-02+ 2.000*(  1.792e-01*  1.914e-02*cos(t)+ -9.838e-01*  8.537e-03*sin(t)),   3.543e-01 +2.000*(  9.838e-01*  1.914e-02*cos(t)+  1.792e-01*  8.537e-03*sin(t)) not
+set out "biaspar/varpijgrbiaspar121-12.png";replot;
+set parametric;unset label
+set log y;set log x; set xlabel "p23 (year-1)";set ylabel "p12 (year-1)"
+set ter png small size 320, 240
+set out "biaspar/varpijgrbiaspar123-12.png"
+set label "65" at   1.338e-01,  2.337e-02 center
+# Age 65, p23 - p12
+plot [-pi:pi]   1.338e-01+ 2.000*(  9.993e-01*  1.768e-02*cos(t)+ -3.696e-02*  1.655e-03*sin(t)),   2.337e-02 +2.000*(  3.696e-02*  1.768e-02*cos(t)+  9.993e-01*  1.655e-03*sin(t)) not
+# Age 70, p23 - p12
+set label "70" at   1.460e-01,  3.691e-02 center
+replot   1.460e-01+ 2.000*(  9.985e-01*  1.541e-02*cos(t)+ -5.441e-02*  1.957e-03*sin(t)),   3.691e-02 +2.000*(  5.441e-02*  1.541e-02*cos(t)+  9.985e-01*  1.957e-03*sin(t)) not
+# Age 75, p23 - p12
+set label "75" at   1.591e-01,  5.827e-02 center
+replot   1.591e-01+ 2.000*(  9.967e-01*  1.275e-02*cos(t)+ -8.076e-02*  2.137e-03*sin(t)),   5.827e-02 +2.000*(  8.076e-02*  1.275e-02*cos(t)+  9.967e-01*  2.137e-03*sin(t)) not
+# Age 80, p23 - p12
+set label "80" at   1.734e-01,  9.186e-02 center
+replot   1.734e-01+ 2.000*(  9.924e-01*  9.884e-03*cos(t)+ -1.231e-01*  2.277e-03*sin(t)),   9.186e-02 +2.000*(  1.231e-01*  9.884e-03*cos(t)+  9.924e-01*  2.277e-03*sin(t)) not
+# Age 85, p23 - p12
+set label "85" at   1.889e-01,  1.445e-01 center
+replot   1.889e-01+ 2.000*(  9.741e-01*  7.696e-03*cos(t)+ -2.260e-01*  3.522e-03*sin(t)),   1.445e-01 +2.000*(  2.260e-01*  7.696e-03*cos(t)+  9.741e-01*  3.522e-03*sin(t)) not
+# Age 90, p23 - p12
+set label "90" at   2.057e-01,  2.268e-01 center
+replot   2.057e-01+ 2.000*(  6.276e-01*  9.309e-03*cos(t)+ -7.786e-01*  7.132e-03*sin(t)),   2.268e-01 +2.000*(  7.786e-01*  9.309e-03*cos(t)+  6.276e-01*  7.132e-03*sin(t)) not
+# Age 95, p23 - p12
+set label "95" at   2.238e-01,  3.543e-01 center
+replot   2.238e-01+ 2.000*(  2.443e-01*  1.925e-02*cos(t)+ -9.697e-01*  1.172e-02*sin(t)),   3.543e-01 +2.000*(  9.697e-01*  1.925e-02*cos(t)+  2.443e-01*  1.172e-02*sin(t)) not
+set out "biaspar/varpijgrbiaspar123-12.png";replot;
+set parametric;unset label
+set log y;set log x; set xlabel "p21 (year-1)";set ylabel "p13 (year-1)"
+set ter png small size 320, 240
+set out "biaspar/varpijgrbiaspar121-13.png"
+set label "65" at   2.481e-01,  1.597e-02 center
+# Age 65, p21 - p13
+plot [-pi:pi]   2.481e-01+ 2.000*(  1.000e+00*  3.883e-02*cos(t)+ -2.210e-03*  1.821e-03*sin(t)),   1.597e-02 +2.000*(  2.210e-03*  3.883e-02*cos(t)+  1.000e+00*  1.821e-03*sin(t)) not
+# Age 70, p21 - p13
+set label "70" at   2.084e-01,  2.117e-02 center
+replot   2.084e-01+ 2.000*(  1.000e+00*  2.492e-02*cos(t)+ -2.683e-03*  1.773e-03*sin(t)),   2.117e-02 +2.000*(  2.683e-03*  2.492e-02*cos(t)+  1.000e+00*  1.773e-03*sin(t)) not
+# Age 75, p21 - p13
+set label "75" at   1.749e-01,  2.803e-02 center
+replot   1.749e-01+ 2.000*(  1.000e+00*  1.485e-02*cos(t)+ -2.605e-03*  1.622e-03*sin(t)),   2.803e-02 +2.000*(  2.605e-03*  1.485e-02*cos(t)+  1.000e+00*  1.622e-03*sin(t)) not
+# Age 80, p21 - p13
+set label "80" at   1.467e-01,  3.707e-02 center
+replot   1.467e-01+ 2.000*(  1.000e+00*  8.412e-03*cos(t)+ -4.929e-03*  1.650e-03*sin(t)),   3.707e-02 +2.000*(  4.929e-03*  8.412e-03*cos(t)+  1.000e+00*  1.650e-03*sin(t)) not
+# Age 85, p21 - p13
+set label "85" at   1.230e-01,  4.893e-02 center
+replot   1.230e-01+ 2.000*(  9.992e-01*  6.267e-03*cos(t)+ -3.981e-02*  2.636e-03*sin(t)),   4.893e-02 +2.000*(  3.981e-02*  6.267e-03*cos(t)+  9.992e-01*  2.636e-03*sin(t)) not
+# Age 90, p21 - p13
+set label "90" at   1.031e-01,  6.441e-02 center
+replot   1.031e-01+ 2.000*(  9.921e-01*  7.441e-03*cos(t)+ -1.255e-01*  5.013e-03*sin(t)),   6.441e-02 +2.000*(  1.255e-01*  7.441e-03*cos(t)+  9.921e-01*  5.013e-03*sin(t)) not
+# Age 95, p21 - p13
+set label "95" at   8.634e-02,  8.441e-02 center
+replot   8.634e-02+ 2.000*(  6.785e-01*  9.541e-03*cos(t)+ -7.346e-01*  8.651e-03*sin(t)),   8.441e-02 +2.000*(  7.346e-01*  9.541e-03*cos(t)+  6.785e-01*  8.651e-03*sin(t)) not
+set out "biaspar/varpijgrbiaspar121-13.png";replot;
+set parametric;unset label
+set log y;set log x; set xlabel "p23 (year-1)";set ylabel "p13 (year-1)"
+set ter png small size 320, 240
+set out "biaspar/varpijgrbiaspar123-13.png"
+set label "65" at   1.338e-01,  1.597e-02 center
+# Age 65, p23 - p13
+plot [-pi:pi]   1.338e-01+ 2.000*(  9.991e-01*  1.769e-02*cos(t)+  4.256e-02*  1.662e-03*sin(t)),   1.597e-02 +2.000*( -4.256e-02*  1.769e-02*cos(t)+  9.991e-01*  1.662e-03*sin(t)) not
+# Age 70, p23 - p13
+set label "70" at   1.460e-01,  2.117e-02 center
+replot   1.460e-01+ 2.000*(  9.986e-01*  1.541e-02*cos(t)+  5.267e-02*  1.580e-03*sin(t)),   2.117e-02 +2.000*( -5.267e-02*  1.541e-02*cos(t)+  9.986e-01*  1.580e-03*sin(t)) not
+# Age 75, p23 - p13
+set label "75" at   1.591e-01,  2.803e-02 center
+replot   1.591e-01+ 2.000*(  9.977e-01*  1.273e-02*cos(t)+  6.800e-02*  1.375e-03*sin(t)),   2.803e-02 +2.000*( -6.800e-02*  1.273e-02*cos(t)+  9.977e-01*  1.375e-03*sin(t)) not
+# Age 80, p23 - p13
+set label "80" at   1.734e-01,  3.707e-02 center
+replot   1.734e-01+ 2.000*(  9.950e-01*  9.861e-03*cos(t)+  9.978e-02*  1.332e-03*sin(t)),   3.707e-02 +2.000*( -9.978e-02*  9.861e-03*cos(t)+  9.950e-01*  1.332e-03*sin(t)) not
+# Age 85, p23 - p13
+set label "85" at   1.889e-01,  4.893e-02 center
+replot   1.889e-01+ 2.000*(  9.810e-01*  7.672e-03*cos(t)+  1.938e-01*  2.231e-03*sin(t)),   4.893e-02 +2.000*( -1.938e-01*  7.672e-03*cos(t)+  9.810e-01*  2.231e-03*sin(t)) not
+# Age 90, p23 - p13
+set label "90" at   2.057e-01,  6.441e-02 center
+replot   2.057e-01+ 2.000*(  9.336e-01*  8.471e-03*cos(t)+  3.582e-01*  4.337e-03*sin(t)),   6.441e-02 +2.000*( -3.582e-01*  8.471e-03*cos(t)+  9.336e-01*  4.337e-03*sin(t)) not
+# Age 95, p23 - p13
+set label "95" at   2.238e-01,  8.441e-02 center
+replot   2.238e-01+ 2.000*(  9.049e-01*  1.305e-02*cos(t)+  4.257e-01*  8.023e-03*sin(t)),   8.441e-02 +2.000*( -4.257e-01*  1.305e-02*cos(t)+  9.049e-01*  8.023e-03*sin(t)) not
+set out "biaspar/varpijgrbiaspar123-13.png";replot;
+set parametric;unset label
+set log y;set log x; set xlabel "p23 (year-1)";set ylabel "p21 (year-1)"
+set ter png small size 320, 240
+set out "biaspar/varpijgrbiaspar123-21.png"
+set label "65" at   1.338e-01,  2.481e-01 center
+# Age 65, p23 - p21
+plot [-pi:pi]   1.338e-01+ 2.000*(  8.647e-03*  3.884e-02*cos(t)+  1.000e+00*  1.767e-02*sin(t)),   2.481e-01 +2.000*( -1.000e+00*  3.884e-02*cos(t)+  8.647e-03*  1.767e-02*sin(t)) not
+# Age 70, p23 - p21
+set label "70" at   1.460e-01,  2.084e-01 center
+replot   1.460e-01+ 2.000*(  1.255e-02*  2.493e-02*cos(t)+  9.999e-01*  1.539e-02*sin(t)),   2.084e-01 +2.000*( -9.999e-01*  2.493e-02*cos(t)+  1.255e-02*  1.539e-02*sin(t)) not
+# Age 75, p23 - p21
+set label "75" at   1.591e-01,  1.749e-01 center
+replot   1.591e-01+ 2.000*(  4.580e-02*  1.486e-02*cos(t)+  9.990e-01*  1.270e-02*sin(t)),   1.749e-01 +2.000*( -9.990e-01*  1.486e-02*cos(t)+  4.580e-02*  1.270e-02*sin(t)) not
+# Age 80, p23 - p21
+set label "80" at   1.734e-01,  1.467e-01 center
+replot   1.734e-01+ 2.000*(  9.957e-01*  9.824e-03*cos(t)+  9.255e-02*  8.399e-03*sin(t)),   1.467e-01 +2.000*( -9.255e-02*  9.824e-03*cos(t)+  9.957e-01*  8.399e-03*sin(t)) not
+# Age 85, p23 - p21
+set label "85" at   1.889e-01,  1.230e-01 center
+replot   1.889e-01+ 2.000*(  9.875e-01*  7.569e-03*cos(t)+  1.578e-01*  6.226e-03*sin(t)),   1.230e-01 +2.000*( -1.578e-01*  7.569e-03*cos(t)+  9.875e-01*  6.226e-03*sin(t)) not
+# Age 90, p23 - p21
+set label "90" at   2.057e-01,  1.031e-01 center
+replot   2.057e-01+ 2.000*(  9.508e-01*  8.134e-03*cos(t)+  3.099e-01*  7.328e-03*sin(t)),   1.031e-01 +2.000*( -3.099e-01*  8.134e-03*cos(t)+  9.508e-01*  7.328e-03*sin(t)) not
+# Age 95, p23 - p21
+set label "95" at   2.238e-01,  8.634e-02 center
+replot   2.238e-01+ 2.000*(  9.979e-01*  1.231e-02*cos(t)+  6.495e-02*  9.056e-03*sin(t)),   8.634e-02 +2.000*( -6.495e-02*  1.231e-02*cos(t)+  9.979e-01*  9.056e-03*sin(t)) not
+set out "biaspar/varpijgrbiaspar123-21.png";replot;
+# Routine varevsij
+unset parametric;unset label; set ter png small size 320, 240
+ set log y; unset log x;set xlabel "Age"; set ylabel "Force of mortality (year-1)";
+ plot "biaspar/prmorprev1-stablbased-rbiaspar.txt"  u 1:($3) not w l lt 1 
+ replot "biaspar/prmorprev1-stablbased-rbiaspar.txt"  u 1:(($3+1.96*$4)) t "95% interval" w l lt 2 
+ replot "biaspar/prmorprev1-stablbased-rbiaspar.txt"  u 1:(($3-1.96*$4)) not w l lt 2 
+set out "biaspar/varmuptjgr-stablbased-biaspar1.png";replot;