--- imach/html/doc/biaspar.htm	2004/06/16 21:43:15	1.1
+++ imach/html/doc/biaspar.htm	2006/02/09 15:20:33	1.3
@@ -1,13 +1,13 @@
 <body>
 <title>IMaCh rbiaspar.txt</title>
- <font size="2">Imach version 0.07a, May 2004, INED-EUROREVES  <br> $Revision: 1.1 $ $Date: 2004/06/16 21:43:15 $</font> <hr size="2" color="#EC5E5E"> 
+ <font size="2">Imach version 0.98b, January 2006, INED-EUROREVES  <br> $Revision: 1.3 $ $Date: 2006/02/09 15:20:33 $</font> <hr size="2" color="#EC5E5E"> 
 Title=1st_example <br>Datafile=data1.txt Firstpass=1 Lastpass=4 Stepm=1 Weight=0 Model=.<br>
 
 <hr  size="2" color="#EC5E5E"> <ul><li><h4>Parameter files</h4>
  - Copy of the parameter file: <a href="orbiaspar.txt">orbiaspar.txt</a><br>
  - Log file of the run: <a href="biaspar.log">biaspar.log</a><br>
  - Gnuplot file name: <a href="biaspar.gp">biaspar.gp</a><br>
- - Date and time at start: Wed Jun 16 20:01:29 2004
+ - Date and time at start: Thu Feb 09 13:51:49 2006
 </ul>
 
 <br>Total number of observations=8270 <br>
@@ -15,7 +15,9 @@ Youngest age at first (selected) pass 70
 Interval (in months) between two waves: Min=1 Max=74 Mean=24.04<br>
 
 <br>File of contributions to the likelihood: <a href="biaspar/ilkrbiaspar.txt">biaspar/ilkrbiaspar.txt</a><br>
-<ul><li><h4>Result files (first order: no variance)</h4>
+<ul><li><a href='#firstorder'>Result files (first order: no variance)</a>
+    <li><a href='#secondorder'>Result files (second order (variance)</a>
+ </ul><ul><li><h4><a name='firstorder'>Result files (first order: no variance)</a></h4>
   - Observed prevalence in each state (during the period defined between 1/1/1984 and 1/6/1988): <a href="biaspar/prbiaspar.txt">biaspar/prbiaspar.txt</a> <br>
   - Estimated transition probabilities over 1 (stepm) months: <a href="biaspar/pijrbiaspar.txt">biaspar/pijrbiaspar.txt</a><br>
   - Stable prevalence in each health state: <a href="biaspar/plrbiaspar.txt">biaspar/plrbiaspar.txt</a> <br>
@@ -24,7 +26,7 @@ Interval (in months) between two waves:
 <ul><li><b>Graphs</b></li><p><br>- Pij or Conditional probabilities to be observed in state j being in state i, 1 (stepm) months before: biaspar/pebiaspar11.png<br> <img src="biaspar/pebiaspar11.png"><br>- Pij or Conditional probabilities to be observed in state j being in state i 1 (stepm) months before but expressed in per year i.e. quasi incidences if stepm is small and probabilities too: biaspar/pebiaspar12.png<br> <img src="biaspar/pebiaspar12.png"><br>- Stable prevalence in each health state : pbiaspar/pbiaspar11.png<br> <img src="biaspar/pbiaspar11.png">
 <br>- Health life expectancies by age and initial health state (1): biaspar/expbiaspar11.png <br> <img src="biaspar/expbiaspar11.png">
 <br>- Health life expectancies by age and initial health state (2): biaspar/expbiaspar21.png <br> <img src="biaspar/expbiaspar21.png"></ul>
-<br><li><h4> Result files (second order: variances)</h4>
+<br><li><h4> <a name='secondorder'>Result files (second order: variances)</a></h4>
  - Parameter file with estimated parameters and covariance matrix: <a href="rbiaspar.imach">rbiaspar.imach</a> <br>
  - Variance of one-step probabilities: <a href="biaspar/probrbiaspar.txt">biaspar/probrbiaspar.txt</a> <br>
  - Variance-covariance of one-step probabilities: <a href="biaspar/probcovrbiaspar.txt">biaspar/probcovrbiaspar.txt</a> <br>
@@ -46,6 +48,6 @@ Interval (in months) between two waves:
 <br> File (multiple files are possible if covariates are present): <A href="biaspar/prmorprev1-stablbased-rbiaspar.txt">biaspar/prmorprev1-stablbased-rbiaspar.txt</a>
 
 <br> Probability is computed over estepm=1 months. <br> <img src="biaspar/varmuptjgr-stablbased-biaspar1.png"> <br>
-<br>Local time at start Wed Jun 16 20:01:29 2004
-<br>Local time at end   Wed Jun 16 21:55:16 2004
+<br>Local time at start Thu Feb 09 13:51:49 2006
+<br>Local time at end   Thu Feb 09 14:44:03 2006
 <br>
\ No newline at end of file
