Diff for /imach/src/ChangeLog between versions 1.40 and 1.67

version 1.40, 2020/02/22 20:59:15 version 1.67, 2023/05/23 12:25:36
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 2020-02-22  Brouard Nicolas  <brouard@brouard.name>  2023-05-23  Nicolas Brouard   <brouard@ined.fr>
   
         *  (Module): imach.c Update mle=-3 (for computing Life expectancy          * imach.c (Module): Fixed PROB_r 
         and life table from the data without any state)  
   2023-05-22  Nicolas Brouard   <brouard@ined.fr>
 2019-05-20  Brouard Nicolas  <brouard@brouard.name>  
           * imach.c (Module): In the ILK....txt file, the number of columns
         * version.h: Summary: version 0.99.r19          before the covariates values is dependent of the number of states (16+nlstate): 0.99r46
   
         * imach.c: Summary: Projection syntax simplified  2023-05-08  Nicolas Brouard   <brouard@ined.fr>
         We can now start projections, forward or backward, from the mean date  
         of inteviews up to or down to a number of years of projection:          *  (Module): Error V0 when result:. and model 1+age+V1: fixed
         prevforecast=1 yearsfproj=15.3 mobil_average=0  
         or  2023-04-29  Nicolas Brouard  <brouard@ined.fr>
         prevforecast=1 starting-proj-date=1/1/2007 final-proj-date=12/31/2017 mobil_average=0  
         or          * imach.c (Module): Inverting the model equation and fixingg bugs
         prevbackcast=1 yearsbproj=12.3 mobil_average=1          in the drawings
         or          "1+age+V7*V4*age+V6*V4*age+V7*V3*age+V6*V3*age+V6*V2*age+V7*age+V6*age+V4*age+V3*age+V2*age+V7*V4+V6*V4+V7*V3+V6*V3+V7*V2+V6*V2+V7+V6+V4+V3+V2\000\0003+V2"
         prevbackcast=1 starting-back-date=1/10/1999 final-back-date=1/1/1985 mobil_average=1  
   2023-04-24  Nicolas Brouard  <brouard@ined.fr>
 2019-05-18  Brouard Nicolas  <brouard@brouard.name>  
           * imach.c (Module): some bugs in printinggnuplot 
         * imach.c: Summary: doxygen tex bug  
   2022-09-19  Nicolas Brouard   <brouard@ined.fr>
 2019-05-16  Brouard Nicolas  <brouard@brouard.name>  
           * imach.c (Module): Version 0.99r42 needed a newer version of
         * imach.c: Summary: There was some wrong lines added          Gnuplot. But newer version 0.99r43 should run with the Gnuplot
           version 5.0 or 5.1 distributed with IMaCh.
 2019-05-09  Brouard Nicolas  <brouard@brouard.name>  
   2022-09-18  Nicolas Brouard   <brouard@ined.fr>
         * Makefile, imach.c: *** empty log message ***  
           * imach.c (Module): Fixing when a state in the data is 0 or higher
         * ChangeLog: Summary: C=          than lstate+ndeath. Fixing the plot of contribution to Likelihood.
   
         * imach.c: Summary: Some updates  2022-09-16  Nicolas Brouard   <brouard@ined.fr>
   
         * imach.c: Summary: Before ncovmax          * imach.c (Module): 0.99r41 Was an error when product of timevarying and fixed. Using FixedV[of name] now. Thank you  Feinuo
   
         * version.h: *** empty log message ***  2022-09-14  Nicolas Brouard   <brouard@ined.fr>
   
         * imach.c: Summary: 0.99r18 unlimited number of individuals          * imach.c (Module): Fixing names of variables in T_ (thanks to Feinuo)
         The number n which was limited to 20,000 cases is now unlimited, from firstobs to lastobs. If the number is too for the virtual memory, probably an error will occur.  
   2022-09-14  Nicolas Brouard   <brouard@ined.fr>
 2018-12-13  Brouard Nicolas  <brouard@brouard.name>  
           * imach.c (Module): Version 0.99r39 with colored dummy covariates
         * imach.c: Summary: Bug for young ages (<-30) will be in r17          (fixed or time varying), using new last columns of
           ILK_parameter.txt file.
 2018-12-05  Brouard Nicolas  <brouard@brouard.name>  
   2022-09-11  Nicolas Brouard   <brouard@ined.fr>
         * Makefile: Summary: 0.99r16  
           * imach.c (Module): Adding timevarying products of any kinds,
 2018-05-02  Brouard Nicolas  <brouard@brouard.name>          should work before shifting cotvar from ncovcol+nqv columns in
           order to have a correspondance between the column of cotvar and
         * imach.c: Summary: Some bugs fixed          the id of column.
           (Module): Some cleaning and adding covariates in ILK.txt
 2018-05-02  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  
   2022-09-09  Nicolas Brouard   <brouard@ined.fr>
         * imach.c:  Summary: Bug for young ages (<-30) will be in r17  
           * imach.c (Module): Many improvements for fixing products of fixed
 2018-05-02  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>          timevarying as well as fixed * fixed, and test with quantitative
           covariate.
         * imach.c: Summary: Some bugs fixed  
   2022-09-04  Nicolas Brouard   <brouard@ined.fr>
 2018-05-01  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  
           * imach.c (Module): Now the easy runs i.e. without result or
         * imach.c:          model=1+age only did not work. The defautl combination should be 1
         Summary: Bug fixed by providing frequencies only for non missing covariates          and not 0 because everything hasn't been tranformed yet.
   
 2018-04-27  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  2022-09-02  Nicolas Brouard   <brouard@ined.fr>
   
         * imach.c: Summary: some minor bugs          * imach.c: Version 0.99r35 because it outputs same results with
           1+age+V1+V1*age for females and 1+age for females only
 2018-04-21  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>          (education=1 noweight)
   
         * README.txt: *** empty log message ***  2022-08-31  Nicolas Brouard   <brouard@ined.fr>
   
         * imach.c: Summary: Some bugs fixed, valgrind tested          * imach.c (Module): Some improvments in fichtm and many verifications 0.99r34
   
 2018-04-20  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  2022-08-21  Nicolas Brouard   <brouard@ined.fr>
   
         * Makefile, README.txt, setup.iss: Summary: imach 0.99r16          * imach.c (Module): Version 0.99r33 A lot of changes in
           reassigning covariates: my first idea was that people will always
         * imach.c:          use the first covariate V1 into the model but in fact they are
         Summary: Computing mean and stdeviation of fixed quantitative variables          producing data with many covariates and can use an equation model
           with some of the covariate; it means that in a model V2+V3 instead
 2018-04-19  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>          of codtabm(k,Tvaraff[j]) which calculates for combination k, for
           three covariates (V1, V2, V3) the value of Tvaraff[j], but in fact
         * imach.c: Summary: Some minor bugs fixed          the equation model is restricted to two variables only (V2, V3)
           and the combination for V2 should be codtabm(k,1) instead of
         * version.h: *** empty log message ***          (codtabm(k,2), and the code should be
           codtabm(k,TnsdVar[Tvaraff[j]]. Many many changes have been
 2018-02-27  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>          made. All of these should be simplified once a day like we did in
           hpxij() for example by using precov[nres] which is computed in
         * imach.c: *** empty log message ***          decoderesult for each nres of each resultline. Loop should be done
           on the equation model globally by distinguishing only product with
         * imach.c: Summary: Adding second argument for quitting          age (which are changing with age) and no more on type of
           covariates, single dummies, single covariates. 
 2018-02-21  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  
   2022-08-06  Nicolas Brouard   <brouard@ined.fr>
         * Makefile, README.txt, imach.c: Summary: 0.99r15  
         New Makefile with recent VirtualBox 5.26. Bug in sqrt negatve in imach.c          *  imach.c (Module): Version of imach using partly decoderesult to rebuild xpxij function
   
 2017-07-20  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  2022-08-03  Nicolas Brouard   <brouard@ined.fr>
   
         * imach.c: Summary: temporary working          *  imach.c (Module): Many errors in graphs fixed with Vn*age covariates.
   
 2017-07-19  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  2022-07-25  Brouard Nicolas  <brouard@brouard.name>
   
         * imach.c: Summary: Bug for mobil_average=0 and prevforecast fixed(?)          * imach.c (Module): Error cptcovn instead of nsd in bmij (was
           coredumped, revealed by Feiuno, thank you.
 2017-07-17  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  
   2022-07-23  Nicolas Brouard   <brouard@ined.fr>
         * imach.c: Summary: BOM files can be read now  
           * r29 W and not sqrt(Wald)
 2017-06-30  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  
   2022-07-22  Nicolas Brouard   <brouard@ined.fr>
         * imach.c: Summary: Graphs improvements  
           *  imach.c (Module): Output of Wald test in the htm file and not only in the log. 
         * imach.c: Summary: Saito's color  
   2022-06-02  Brouard Nicolas  <brouard@brouard.name>
 2017-06-29  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  
           * imach.c (Module): Adding the Wald tests from the log to the main
         * imach.c: Summary: Version 0.99r14          htm for better display of the maximum likelihood estimators.
   
 2017-06-27  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  2022-05-30  Brouard Nicolas  <brouard@brouard.name>
   
         * imach.c: Summary: More documentation on projections          * imach.c: With products of covariates (age or dummies or
           quantitatives), estimates of parameters were good but when
         * imach.c: Summary: Color of backprojection changed from 6 to 5(yellow)          estimating variances the positions of newly created covariates
           were wrongly assigned and results were wrong. Thank to Feinua_Sun!
         * imach.c: Summary: Some bug with rint  
   2022-05-24  Nicolas Brouard   <brouard@ined.fr>
 2017-05-24  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  
           * imach.c (Module): Some attempts to find a bug of wrong estimates
         * imach.c: *** empty log message ***          of confidencce intervals with product in the equation modelC
   
 2017-05-23  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  2022-05-15  Nicolas Brouard   <brouard@ined.fr>
   
         * imach.c: Summary: Code into subroutine, cleanings          * imach.c (Module):  Some minor improvements
   
 2017-05-18  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  2022-04-13  Brouard Nicolas  <brouard@brouard.name>
   
         * imach.c:          * imach.c (Module): Adding link to text data files
         Summary: backprojection and confidence intervals of backprevalence  
   2022-04-11  Nicolas Brouard   <brouard@ined.fr>
 2017-05-13  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  
           * imach.c (Module): Error in rewriting the 'r' file with yearsfproj or yearsbproj fixed
         * imach.c: Summary: temporary save for backprojection  
   2022-04-05  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: Summary: Version 0.99r13 (improvements and bugs fixed)  
           * imach.c (Module): Fixed covariates (dummy or quantitative)
 2017-04-26  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>          with missing values have never been allowed but are ERRORS and
           program quits. Standard deviations of fixed covariates were
         * imach.c: Summary: imach 0.99r13 Some bugs fixed          wrongly computed. Mean and standard deviations of time varying
           covariates are still not computed.
         * imach.c: Summary: Labels in graphs  
   2022-03-17  Brouard Nicolas  <brouard@ined.fr>
 2017-04-24  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  
           * 99r25 Improvements in fixing discrepancies between covariates
         * imach.c: Summary: to save          missing in result line but in model. 
   
 2017-04-18  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  *Wed Mar 31 2021  Nicolas Brouard   <brouard@ined.fr>
           * imach.c (Module): Still bugs in the result loop. Thank to Holly Benett
         * imach.c: *** empty log message ***  
   *2021-03-08  Nicolas Brouard   <brouard@ined.fr>
 2017-04-05  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  
           * ./ (Module): Fixed bug on result:
         * imach.c: Summary: Bug in E_ as well as in T_ fixed nres-1 vs k1-1  
   *2021-02-20  Nicolas Brouard   <brouard@ined.fr>
 2017-04-04  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  
           * imach.c (Module): Fix bug on quitting after result lines!
         * imach.c: Summary: Gnuplot indexations fixed (humm)          (Module): Version 0.99r21
   
         * imach.c:  2021-02-12  Nicolas Brouard   <brouard@ined.fr>
         Summary: Some errors to warnings only if date of death is unknown but status is death we could set to pi3  
           * imach.c (Module): The use of a Windows BOM (huge) file is now an error
 2017-04-03  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  
   
         * imach.c: Summary: Version 0.99r12  2021-02-11  Nicolas  Brouard   <brouard@ined.fr>
         Some cleanings, conformed with updated documentation.  
           *  (Module): imach.c Someone entered 'results:' instead of 'result:'. Now it is an error which is printed.
 2017-03-30  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  
   2020-02-22  Brouard Nicolas  <brouard@ined.fr>
         * version.h: *** empty log message ***  
           *  (Module): imach.c Update mle=-3 (for computing Life expectancy
         * version.h: Summary:0.99r11          and life table from the data without any state)
   
 2017-03-29  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  2019-05-20  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c: Summary: Temp          * version.h: Summary: version 0.99.r19
   
 2017-03-27  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>          * imach.c: Summary: Projection syntax simplified
           We can now start projections, forward or backward, from the mean date
         * imach.c: Summary: Temporary          of inteviews up to or down to a number of years of projection:
           prevforecast=1 yearsfproj=15.3 mobil_average=0
 2017-03-08  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>          or
           prevforecast=1 starting-proj-date=1/1/2007 final-proj-date=12/31/2017 mobil_average=0
         * imach.c: Summary: IMaCh version 0.99r10 bugs in gnuplot fixed          or
           prevbackcast=1 yearsbproj=12.3 mobil_average=1
         * imach.c: Summary: Fixing data parameter line          or
           prevbackcast=1 starting-back-date=1/10/1999 final-back-date=1/1/1985 mobil_average=1
 2016-12-15  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  
   2019-05-18  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: Summary: 0.99 in progress  
           * imach.c: Summary: doxygen tex bug
 2016-09-15  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  
   2019-05-16  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: *** empty log message ***  
           * imach.c: Summary: There was some wrong lines added
         * imach.c: Summary: not working  
   2019-05-09  Brouard Nicolas  <brouard@ined.fr>
 2016-09-08  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  
           * Makefile, imach.c: *** empty log message ***
         * imach.c: Summary: continue  
           * ChangeLog: Summary: C=
 2016-09-07  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  
           * imach.c: Summary: Some updates
         * imach.c: Summary: Starting values from frequencies  
           * imach.c: Summary: Before ncovmax
         * imach.c: *** empty log message ***  
           * version.h: *** empty log message ***
 2016-09-02  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  
           * imach.c: Summary: 0.99r18 unlimited number of individuals
         * imach.c: *** empty log message ***          The number n which was limited to 20,000 cases is now unlimited, from firstobs to lastobs. If the number is too for the virtual memory, probably an error will occur.
   
 2016-08-30  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  2018-12-13  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c: Summary: Fixing a lots          * imach.c: Summary: Bug for young ages (<-30) will be in r17
   
 2016-08-29  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  2018-12-05  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c: Summary: gnuplot problem in Back projection to fix          * Makefile: Summary: 0.99r16
   
         * imach.c: Summary: Better  2018-05-02  Brouard Nicolas  <brouard@ined.fr>
   
 2016-08-26  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>          * imach.c: Summary: Some bugs fixed
   
         * imach.c:  2018-05-02  Brouard Nicolas  <brouard@ined.fr>
         Summary: Improvement in Powell output in order to copy and paste  
           * imach.c:  Summary: Bug for young ages (<-30) will be in r17
         * imach.c: Summary: Starting tests of 0.99  
   2018-05-02  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: Summary: to valgrind  
           * imach.c: Summary: Some bugs fixed
 2016-08-25  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  
   2018-05-01  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: *** empty log message ***  
           * imach.c:
 2016-08-23  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>          Summary: Bug fixed by providing frequencies only for non missing covariates
   
         * imach.c: *** empty log message ***  2018-04-27  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c: Summary: not working          * imach.c: Summary: some minor bugs
   
 2016-08-22  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  2018-04-21  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c: Summary: not working          * README.txt: *** empty log message ***
   
         * imach.c: Summary: Not working          * imach.c: Summary: Some bugs fixed, valgrind tested
   
 2016-07-23  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  2018-04-20  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c: Summary: Completing for func too          * Makefile, README.txt, setup.iss: Summary: imach 0.99r16
   
 2016-07-22  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>          * imach.c:
           Summary: Computing mean and stdeviation of fixed quantitative variables
         * imach.c: Summary: Fixing some arrays, still debugging  
   2018-04-19  Brouard Nicolas  <brouard@ined.fr>
 2016-07-21  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  
           * imach.c: Summary: Some minor bugs fixed
         * imach.c:  
         Summary: 0.99 working (more or less) for Asian Workshop on multitate methods          * version.h: *** empty log message ***
   
 2016-07-12  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  2018-02-27  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c: Summary: temp          * imach.c: *** empty log message ***
   
         * imach.c: Summary: saving but not running          * imach.c: Summary: Adding second argument for quitting
   
 2016-07-01  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  2018-02-21  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c: Summary: Fixes          * Makefile, README.txt, imach.c: Summary: 0.99r15
           New Makefile with recent VirtualBox 5.26. Bug in sqrt negatve in imach.c
 2016-02-19  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  
   2017-07-20  Brouard Nicolas  <brouard@ined.fr>
         * imach-0.98r.c: Summary: Kind of 0.98r? series, starting with r7  
           * imach.c: Summary: temporary working
         * setup.iss, Makefile, version.h: *** empty log message ***  
   2017-07-19  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: Summary: temporary  
           * imach.c: Summary: Bug for mobil_average=0 and prevforecast fixed(?)
 2016-02-17  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  
   2017-07-17  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: Summary: Probably last 0.98 stable version 0.98r6  
           * imach.c: Summary: BOM files can be read now
 2016-02-16  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  
   2017-06-30  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: Summary: minor bug  
           * imach.c: Summary: Graphs improvements
         * imach.c: Summary: 0.99r2  
           * imach.c: Summary: Saito's color
 2016-02-15  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  
   2017-06-29  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: *** empty log message ***  
           * imach.c: Summary: Version 0.99r14
 2016-02-12  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  
   2017-06-27  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: Summary: 0.99 Back projections  
           * imach.c: Summary: More documentation on projections
 2015-12-23  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  
           * imach.c: Summary: Color of backprojection changed from 6 to 5(yellow)
         * imach.c: Summary: Experimental backcast  
           * imach.c: Summary: Some bug with rint
 2015-12-18  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  
   2017-05-24  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: Summary: 0.98r4 Warning and status=-2  
           * imach.c: *** empty log message ***
         Version 0.98r4 is now:  
          - displaying an error when status is -1, date of interview unknown and date of death known;  2017-05-23  Brouard Nicolas  <brouard@ined.fr>
          - permitting a status -2 when the vital status is unknown at a known date of right truncation.  
         Older changes concerning s=-2, dating from 2005 have been supersed.          * imach.c: Summary: Code into subroutine, cleanings
   
         * Makefile: *** empty log message ***  2017-05-18  Brouard Nicolas  <brouard@ined.fr>
   
 2015-12-16  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>          * imach.c:
           Summary: backprojection and confidence intervals of backprevalence
         * Makefile: *** empty log message ***  
   2017-05-13  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: Summary: 0.98r4 working  
           * imach.c: Summary: temporary save for backprojection
         * Makefile: Summary: linuxrpm added  
           * imach.c: Summary: Version 0.99r13 (improvements and bugs fixed)
         * Makefile: *** empty log message ***  
   2017-04-26  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: Summary: temporary not working  
           * imach.c: Summary: imach 0.99r13 Some bugs fixed
 2015-12-11  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  
           * imach.c: Summary: Labels in graphs
         * imach.c: Summary: 0.98r4  
   2017-04-24  Brouard Nicolas  <brouard@ined.fr>
 2015-12-08  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  
           * imach.c: Summary: to save
         * Makefile: *** empty log message ***  
   2017-04-18  Brouard Nicolas  <brouard@ined.fr>
 2015-11-21  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  
           * imach.c: *** empty log message ***
         * Makefile:  
         Summary: VBoxManage change from execute --image to run --exe and --wait-exit doesn't exist any more  2017-04-05  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c: Summary: minor typo          * imach.c: Summary: Bug in E_ as well as in T_ fixed nres-1 vs k1-1
   
         * imach.c: Summary: 0.98r3 with some graph of projected cross-sectional  2017-04-04  Brouard Nicolas  <brouard@ined.fr>
   
         Author: Nicolas Brouard          * imach.c: Summary: Gnuplot indexations fixed (humm)
   
 2015-11-18  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>          * imach.c:
           Summary: Some errors to warnings only if date of death is unknown but status is death we could set to pi3
         * imach.c: Summary: Start working on projected prevalences  
   2017-04-03  Brouard Nicolas  <brouard@ined.fr>
 2015-11-17  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  
           * imach.c: Summary: Version 0.99r12
         * imach.c: Summary: Adding ftolpl parameter          Some cleanings, conformed with updated documentation.
         Author: N Brouard  
   2017-03-30  Brouard Nicolas  <brouard@ined.fr>
         We had difficulties to get smoothed confidence intervals. It was due  
         to the period prevalence which wasn't computed accurately. The inner          * version.h: *** empty log message ***
         parameter ftolpl is now an outer parameter of the .imach parameter  
         file after estepm. If ftolpl is small 1.e-4 and estepm too,          * version.h: Summary:0.99r11
         computation are long.  
   2017-03-29  Brouard Nicolas  <brouard@ined.fr>
         * version.h: *** empty log message ***  
           * imach.c: Summary: Temp
         * imach.c: Summary: temporary  
   2017-03-27  Brouard Nicolas  <brouard@ined.fr>
 2015-10-27  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  
           * imach.c: Summary: Temporary
         * Makefile: *** empty log message ***  
   2017-03-08  Brouard Nicolas  <brouard@ined.fr>
         * setup.iss.in: Summary: some new subdirs  
           * imach.c: Summary: IMaCh version 0.99r10 bugs in gnuplot fixed
         * imach.c: *** empty log message ***  
           * imach.c: Summary: Fixing data parameter line
         * setup.iss.in:  
         Summary: Adding gnuplot 5.1 with bin and etc for pango fonts  2016-12-15  Brouard Nicolas  <brouard@ined.fr>
   
 2015-10-24  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>          * imach.c: Summary: 0.99 in progress
   
         * imach.c: *** empty log message ***  2016-09-15  Brouard Nicolas  <brouard@ined.fr>
   
 2015-10-23  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>          * imach.c: *** empty log message ***
   
         * imach.c:          * imach.c: Summary: not working
         Summary: 0.98r3 some clarification for graphs on likelihood contributions  
   2016-09-08  Brouard Nicolas  <brouard@ined.fr>
 2015-10-01  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  
           * imach.c: Summary: continue
         * imach.c: Summary: Some new graphs of contribution to likelihood  
   2016-09-07  Brouard Nicolas  <brouard@ined.fr>
 2015-09-30  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  
           * imach.c: Summary: Starting values from frequencies
         * Makefile:  
         Summary: Version read from version.h, itself read with cmake          * imach.c: *** empty log message ***
   
         * imach.c: Summary: looking at better estimation of the hessian  2016-09-02  Brouard Nicolas  <brouard@ined.fr>
   
         Also a better criteria for convergence to the period prevalence And          * imach.c: *** empty log message ***
         therefore adding the number of years needed to converge. (The  
         prevalence in any alive state shold sum to one  2016-08-30  Brouard Nicolas  <brouard@ined.fr>
   
         * Makefile: *** empty log message ***          * imach.c: Summary: Fixing a lots
   
 2015-09-22  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  2016-08-29  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c:          * imach.c: Summary: gnuplot problem in Back projection to fix
         Summary: Adding some overall graph on contribution to likelihood. Might change  
           * imach.c: Summary: Better
 2015-09-15  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  
   2016-08-26  Brouard Nicolas  <brouard@ined.fr>
         * Makefile: *** empty log message ***  
           * imach.c:
         * imach.c: Summary: 0.98r0          Summary: Improvement in Powell output in order to copy and paste
   
         - Some new graphs like suvival functions          * imach.c: Summary: Starting tests of 0.99
         - Some bugs fixed like model=1+age+V2.  
           * imach.c: Summary: to valgrind
         * ChangeLog, Makefile: Summary: 0.98r0  
   2016-08-25  Brouard Nicolas  <brouard@ined.fr>
         * CMakeLists.txt: Summary: Some tests for setup.iss  
           * imach.c: *** empty log message ***
 2015-09-15  Nicolas J Brouard   <nbrouard@tugault.ined.fr>  
   2016-08-23  Brouard Nicolas  <brouard@ined.fr>
         *  (Module): 0.98r0 Some new graphs, some bugs fixed: model=1+age+V2. etc  
           * imach.c: *** empty log message ***
 2015-08-18  Nicolas J Brouard   <nbrouard@tugault.local>  
           * imach.c: Summary: not working
         *  (Module): Adding error when the covariance matrix doesn't contain the exact number of lines required by the model line.  
   2016-08-22  Brouard Nicolas  <brouard@ined.fr>
 2015-08-03  Nicolas J Brouard   <nbrouard@tugault.ined.fr>  
           * imach.c: Summary: not working
         *  (Module): Changing Variance of one-step probabilities into Standard deviation (thanks to Yao-Chi Shih)  
           * imach.c: Summary: Not working
 2014-12-16  Nicolas J Brouard   <nbrouard@tugault.local>  
   2016-07-23  Brouard Nicolas  <brouard@ined.fr>
         * imach.c (Module): Merging 1.61 to 1.162  
           * imach.c: Summary: Completing for func too
 2014-09-02  Nicolas J Brouard   <nbrouard@njbrouard.ined.fr>  
   2016-07-22  Brouard Nicolas  <brouard@ined.fr>
         * prevlim.h (Module):  
           * imach.c: Summary: Fixing some arrays, still debugging
 2014-01-26  Nicolas J Brouard   <nbrouard@ledermann-2.local>  
   2016-07-21  Brouard Nicolas  <brouard@ined.fr>
         * imach.c (Module): Trying to merge old staffs together while being at Tokyo. Not tested...  
         (Module): Version 0.98nR Running ok, but output format still only works for three covariates.          * imach.c:
           Summary: 0.99 working (more or less) for Asian Workshop on multitate methods
 2010-04-29  brouard  <brouard@ined.fr>  
   2016-07-12  Brouard Nicolas  <brouard@ined.fr>
         * imach.c (Module): Checking covariates for more complex models  
         than V1+V2. A lot of change to be done. Unstable.          * imach.c: Summary: temp
   
 2010-04-26  brouard  <brouard@ined.fr>          * imach.c: Summary: saving but not running
   
         * imach.c (Module): merging some libgsl code. Fixing computation  2016-07-01  Brouard Nicolas  <brouard@ined.fr>
         of likelione (using inter/intrapolation if mle = 0) in order to  
         get same likelihood as if mle=1.          * imach.c: Summary: Fixes
         Some cleaning of code and comments added.  
   2016-02-19  Brouard Nicolas  <brouard@ined.fr>
 2009-10-29  brouard  <brouard@ined.fr>  
           * imach-0.98r.c: Summary: Kind of 0.98r? series, starting with r7
         * imach.c (Module): Now imach stops if date of birth, at least year of birth, is not given. Some cleaning of the code.  
           * setup.iss, Makefile, version.h: *** empty log message ***
 2006-06-30  Brouard Nicolas  <brouard@localhost>  
           * imach.c: Summary: temporary
         * imach.c (Module): Clarifications on computing e.j  
   2016-02-17  Brouard Nicolas  <brouard@ined.fr>
 2006-04-28  Brouard Nicolas  <brouard@localhost>  
           * imach.c: Summary: Probably last 0.98 stable version 0.98r6
         * imach.c (Module): Yes the sum of survivors was wrong since  
         imach-114 because nhstepm was no more computed in the age  2016-02-16  Brouard Nicolas  <brouard@ined.fr>
         loop. Now we define nhstepma in the age loop.  
         (Module): In order to speed up (in case of numerous covariates) we          * imach.c: Summary: minor bug
         compute health expectancies (without variances) in a first step  
         and then all the health expectancies with variances or standard          * imach.c: Summary: 0.99r2
         deviation (needs data from the Hessian matrices) which slows the  
         computation.  2016-02-15  Brouard Nicolas  <brouard@ined.fr>
         In the future we should be able to stop the program is only health  
         expectancies and graph are needed without standard deviations.          * imach.c: *** empty log message ***
   
 2006-04-04  LIEVRE Agnes  <lievre@PC_00697.ined.fr>  2016-02-12  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.iss (Module):          * imach.c: Summary: 0.99 Back projections
   
         * imach.c (Module): bugs in evsi + population file added in htm output file  2015-12-23  Brouard Nicolas  <brouard@ined.fr>
   
 2006-03-22  LIEVRE Agnes  <lievre@PC_00697.ined.fr>          * imach.c: Summary: Experimental backcast
   
         * imach.c (Module):  2015-12-18  Brouard Nicolas  <brouard@ined.fr>
   
 2006-03-20  Brouard Nicolas  <brouard@localhost>          * imach.c: Summary: 0.98r4 Warning and status=-2
   
         * imach.c (Module): <title> changed, corresponds to .htm file          Version 0.98r4 is now:
         name. <head> headers where missing.           - displaying an error when status is -1, date of interview unknown and date of death known;
            - permitting a status -2 when the vital status is unknown at a known date of right truncation.
         * Makefile (Module): 0.98g          Older changes concerning s=-2, dating from 2005 have been supersed.
   
         * imach.c (Module): Weights can have a decimal point as for          * Makefile: *** empty log message ***
         English (a comma might work with a correct LC_NUMERIC environment,  
         otherwise the weight is truncated).  2015-12-16  Brouard Nicolas  <brouard@ined.fr>
         Modification of warning when the covariates values are not 0 or  
         1.          * Makefile: *** empty log message ***
         Version 0.98g  
           * imach.c: Summary: 0.98r4 working
 2006-03-16  LIEVRE Agnes  <lievre@PC_00697.ined.fr>  
           * Makefile: Summary: linuxrpm added
         * imach.c (Module): Comments concerning covariates added  
           * Makefile: *** empty log message ***
         * noreg-setup.iss (Module): Version 0.98f  
           * imach.c: Summary: temporary not working
         * Makefile (Module): Version 0.98f make _windows=1 imachcyg-setup  
   2015-12-11  Brouard Nicolas  <brouard@ined.fr>
         * imach.c (Module): refinements in the computation of lli if  
         status=-2 in order to have more reliable computation if stepm is          * imach.c: Summary: 0.98r4
         not 1 month. Version 0.98f  
   2015-12-08  Brouard Nicolas  <brouard@ined.fr>
 2006-03-15  Brouard Nicolas  <brouard@localhost>  
           * Makefile: *** empty log message ***
         * imach.c (Module): Bug if status = -2, the loglikelihood was  
         computed as likelihood omitting the logarithm. Version O.98e  2015-11-21  Brouard Nicolas  <brouard@ined.fr>
   
 2006-03-14  Brouard Nicolas  <brouard@localhost>          * Makefile:
           Summary: VBoxManage change from execute --image to run --exe and --wait-exit doesn't exist any more
         * imach.c (Module): varevsij Comments added explaining the second  
         table of variances if popbased=1 .          * imach.c: Summary: minor typo
         (Module): Covariances of eij, ekl added, graphs fixed, new html link.  
         (Module): Function pstamp added          * imach.c: Summary: 0.98r3 with some graph of projected cross-sectional
         (Module): Version 0.98d  
           Author: Nicolas Brouard
 2006-03-06  Brouard Nicolas  <brouard@localhost>  
   2015-11-18  Brouard Nicolas  <brouard@ined.fr>
         * imach.c (Module): Variance-covariance wrong links and  
         varian-covariance of ej. is needed (Saito).          * imach.c: Summary: Start working on projected prevalences
   
 2006-02-27  Brouard Nicolas  <brouard@localhost>  2015-11-17  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c (Module): One freematrix added in mlikeli!          * imach.c: Summary: Adding ftolpl parameter
           Author: N Brouard
 2006-02-26  Brouard Nicolas  <brouard@localhost>  
           We had difficulties to get smoothed confidence intervals. It was due
         * imach.c (Module): Some improvements in processing parameter          to the period prevalence which wasn't computed accurately. The inner
         filename with strsep.          parameter ftolpl is now an outer parameter of the .imach parameter
           file after estepm. If ftolpl is small 1.e-4 and estepm too,
 2006-02-24  Brouard Nicolas  <brouard@localhost>          computation are long.
   
         * imach.c (Module): Memory leaks checks with valgrind and:          * version.h: *** empty log message ***
         datafile was not closed, some imatrix were not freed and on matrix  
         allocation too.          * imach.c: Summary: temporary
   
 2006-02-09  LIEVRE Agnes  <lievre@PC_00697.ined.fr>  2015-10-27  Brouard Nicolas  <brouard@ined.fr>
   
         * strsep.c (Module): Inclusion because not in mingw32!!!          * Makefile: *** empty log message ***
   
         * setup.iss.in (Module): IMACHSETUPVERSION added          * setup.iss.in: Summary: some new subdirs
   
         * noreg-setup.iss (Module): added to cvs tree          * imach.c: *** empty log message ***
   
         * Makefile (Module): IMACHSETUPVERSION added          * setup.iss.in:
           Summary: Adding gnuplot 5.1 with bin and etc for pango fonts
 2006-01-30  BROUARD Nicolas  <brouard@localhost>  
   2015-10-24  Brouard Nicolas  <brouard@ined.fr>
         * Makefile (Module, Module): Latest Makefile  
           * imach.c: *** empty log message ***
         * imach.c (Module): Back to gnuplot.exe instead of wgnuplot.exe  
   2015-10-23  Brouard Nicolas  <brouard@ined.fr>
 2006-01-27  BROUARD Nicolas  <brouard@localhost>  
           * imach.c:
         * noreg-setup.iss (Module): ADDED          Summary: 0.98r3 some clarification for graphs on likelihood contributions
   
 2006-01-24  BROUARD Nicolas  <brouard@localhost>  2015-10-01  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c (Module): Comments (lines starting with a #) are allowed in data.          * imach.c: Summary: Some new graphs of contribution to likelihood
   
 2005-10-25  Nicolas Brouard  <brouard@dhcp171.recherche.ined.fr>  2015-09-30  Brouard Nicolas  <brouard@ined.fr>
   
         * Makefile (Module): Added Imach98.pmsp and howto crete a dmg          * Makefile:
           Summary: Version read from version.h, itself read with cmake
         * createdmg.sh (Module): Creates a dmg disk for MaC OS/X  
           * imach.c: Summary: looking at better estimation of the hessian
 2005-09-30    <lievre@PC_00595>  
           Also a better criteria for convergence to the period prevalence And
         * imach.c (Module): sump fixed, loop imx fixed, and simplifications.          therefore adding the number of years needed to converge. (The
         (Module): If the status is missing at the last wave but we know          prevalence in any alive state shold sum to one
         that the person is alive, then we can code his/her status as -2  
         (instead of missing=-1 in earlier versions) and his/her          * Makefile: *** empty log message ***
         contributions to the likelihood is 1 - Prob of dying from last  
         health status (= 1-p13= p11+p12 in the easiest case of somebody in  2015-09-22  Brouard Nicolas  <brouard@ined.fr>
         the healthy state at last known wave). Version is 0.98  
           * imach.c:
 2004-05-20  Brouard Nicolas  <brouard@localhost>          Summary: Adding some overall graph on contribution to likelihood. Might change
   
         * imach.c (Repository):  2015-09-15  Brouard Nicolas  <brouard@ined.fr>
         Agnes added a direct estimation of mortality (without the need of  
         computing period prevalence and differential mortality). Thus here          * Makefile: *** empty log message ***
         is version 0.97a which has been distributed to some people at  
         REVES 16 in Brugge using an Inno setup.exe for PCs. Estimates of          * imach.c: Summary: 0.98r0
         mortality using covariates is not done today. Estimating direct  
         mortality is a very different process because it doesn't need          - Some new graphs like survival functions
         interpolation because it is easy to get the lx from the force of          - Some bugs fixed like model=1+age+V2.
         the mortality mux in the simplest case as for a Gompertz (log mux  
         = a + b*x . But we have been able to incorporate the new code          * ChangeLog, Makefile: Summary: 0.98r0
         within former imach program (0.96d) without deteriorating too much  
         the understanding of the program.          * CMakeLists.txt: Summary: Some tests for setup.iss
   
 2003-06-25    <brouard@BROUARD>  2015-09-15  Nicolas J Brouard   <nbrouard@tugault.ined.fr>
   
         * imach.c (Module): On windows (cygwin) function asctime_r doesn't          *  (Module): 0.98r0 Some new graphs, some bugs fixed: model=1+age+V2. etc
         exist so I changed back to asctime which exists.  
         (Module): Version 0.96b  2015-08-18  Nicolas J Brouard   <nbrouard@tugault.local>
   
 2003-06-24    <brouard@BROUARD>          *  (Module): Adding error when the covariance matrix doesn't contain the exact number of lines required by the model line.
   
         * imach.c (Module): Some bugs corrected for windows. Also, when  2015-08-03  Nicolas J Brouard   <nbrouard@tugault.ined.fr>
         mle=-1 a template is output in file "or"mypar.txt with the design  
         of the covariance matrix to be input.          *  (Module): Changing Variance of one-step probabilities into Standard deviation (thanks to Yao-Chi Shih)
   
 2003-06-25  Brouard Nicolas  <brouard@homebrou>  2014-12-16  Nicolas J Brouard   <nbrouard@tugault.local>
   
         * imach.c (Repository): Duplicated warning errors corrected.          * imach.c (Module): Merging 1.61 to 1.162
         (Repository): Elapsed time after each iteration is now output. It  
         helps to forecast when convergence will be reached. Elapsed time  2014-09-02  Nicolas J Brouard   <nbrouard@njbrouard.ined.fr>
         is stamped in powell.  We created a new html file for the graphs  
         concerning matrix of covariance. It has extension -cov.htm.          * prevlim.h (Module): 
   
 2003-06-23  Brouard Nicolas  <brouard@homebrou>  2014-01-26  Nicolas J Brouard   <nbrouard@ledermann-2.local>
   
         * imach.c (Repository): Create a sub-directory where all the secondary files are. Only imach, htm, gp and r(imach) are on the main directory. Correct time and other things.          * imach.c (Module): Trying to merge old staffs together while being at Tokyo. Not tested...
           (Module): Version 0.98nR Running ok, but output format still only works for three covariates.
 2003-06-18  Brouard Nicolas  <brouard@homebrou>  
   2010-04-29  brouard  <brouard@ined.fr>
         * imach.c (Repository): Suppress abusive calls to append to file html (solution was to put fichtm as a global variable. Version 0.96  
           * imach.c (Module): Checking covariates for more complex models
 2003-06-17  Brouard Nicolas  <brouard@homebrou>          than V1+V2. A lot of change to be done. Unstable.
   
   2010-04-26  brouard  <brouard@ined.fr>
         * imach.c (Repository): Check when date of death was earlier that  
         current date of interview. It may happen when the death was just          * imach.c (Module): merging some libgsl code. Fixing computation
         prior to the death. In this case, dh was negative and likelihood          of likelione (using inter/intrapolation if mle = 0) in order to
         was wrong (infinity). We still send an "Error" but patch by          get same likelihood as if mle=1.
         assuming that the date of death was just one stepm after the          Some cleaning of code and comments added.
         interview.  
         (Repository): Because some people have very long ID (first column)  2009-10-29  brouard  <brouard@ined.fr>
         we changed int to long in num[] and we added a new lvector for  
         memory allocation. But we also truncated to 8 characters (left          * imach.c (Module): Now imach stops if date of birth, at least year of birth, is not given. Some cleaning of the code.
         truncation)  
   2006-06-30  Brouard Nicolas  <brouard@localhost>
         (Repository): No more line truncation errors.  
           * imach.c (Module): Clarifications on computing e.j
 2003-06-14  Brouard Nicolas  <brouard@homebrou>  
   2006-04-28  Brouard Nicolas  <brouard@localhost>
         * imach.c (Repository): Add of a routine likelione (likelihood  
         only once) which prints on a text file          * imach.c (Module): Yes the sum of survivors was wrong since
         (ilk) the contributions to the likelihood for each          imach-114 because nhstepm was no more computed in the age
         individual/wave.          loop. Now we define nhstepma in the age loop.
           (Module): In order to speed up (in case of numerous covariates) we
 2003-06-13  Brouard Nicolas  <brouard@homebrou>          compute health expectancies (without variances) in a first step
         * imach.c (Repository): Replace "freqsummary" at a correct          and then all the health expectancies with variances or standard
         place. It differs from routine "prevalence" which may be called          deviation (needs data from the Hessian matrices) which slows the
         many times. Probs is memory consuming and must be used with          computation.
         parcimony.          In the future we should be able to stop the program is only health
           expectancies and graph are needed without standard deviations.
 2003-06-17    <brouard@BROUARD>  
   2006-04-04  LIEVRE Agnes  <lievre@PC_00697.ined.fr>
         * timeval.h (Module): Added included file to make use of  
         gettimeofday working on win32 with cygwin.          * imach.iss (Module): 
   
 2003-05-16  Brouard Nicolas  <brouard@brouard>          * imach.c (Module): bugs in evsi + population file added in htm output file
         * imach.c (Module): Insert of a warning if the delay between two  
         waves is negative.  2006-03-22  LIEVRE Agnes  <lievre@PC_00697.ined.fr>
   
         * imach.c (Module):          * imach.c (Module): 
   
 2003-05-03    <brouard@BROUARD>  2006-03-20  Brouard Nicolas  <brouard@localhost>
   
         * imach.c: Some cleaning          * imach.c (Module): <title> changed, corresponds to .htm file
           name. <head> headers where missing.
 2003-03-28    <brouard@BROUARD>  
         * imach.c (Module): In version up to 0.92 likelihood was computed          * Makefile (Module): 0.98g
         as if date of death was unknown. Death was treated as any other  
         health state: the date of the interview describes the actual state          * imach.c (Module): Weights can have a decimal point as for
         and not the date of a change in health state. The former idea was          English (a comma might work with a correct LC_NUMERIC environment,
         to consider that at each interview the state was recorded          otherwise the weight is truncated).
         (healthy, disable or death) and IMaCh was corrected; but when we          Modification of warning when the covariates values are not 0 or
         introduced the exact date of death then we should have modified          1. 
         the contribution of an exact death to the likelihood. This new          Version 0.98g
         contribution is smaller and very dependent of the step unit  
         stepm. It is no more the probability to die between last interview  2006-03-16  LIEVRE Agnes  <lievre@PC_00697.ined.fr>
         and month of death but the probability to survive from last  
         interview up to one month before death multiplied by the          * imach.c (Module): Comments concerning covariates added
         probability to die within a month. Thanks to Chris  
         Jackson for correcting this bug.  Former versions increased          * noreg-setup.iss (Module): Version 0.98f
         mortality artificially. The bad side is that we add another loop  
           * Makefile (Module): Version 0.98f make _windows=1 imachcyg-setup
   
         which slows down the processing. The difference can be up to 10%          * imach.c (Module): refinements in the computation of lli if
           status=-2 in order to have more reliable computation if stepm is
           not 1 month. Version 0.98f
         lower mortality.  
   2006-03-15  Brouard Nicolas  <brouard@localhost>
   
           * imach.c (Module): Bug if status = -2, the loglikelihood was
           computed as likelihood omitting the logarithm. Version O.98e
   
 2002-05-30    <brouard@BROUARD>  2006-03-14  Brouard Nicolas  <brouard@localhost>
   
           * imach.c (Module): varevsij Comments added explaining the second
           table of variances if popbased=1 .
           (Module): Covariances of eij, ekl added, graphs fixed, new html link.
           (Module): Function pstamp added
         *          (Module): Version 0.98d 
   
   2006-03-06  Brouard Nicolas  <brouard@localhost>
   
           * imach.c (Module): Variance-covariance wrong links and
           varian-covariance of ej. is needed (Saito).
         * imach.c (Module): Add correlation matrix of one-step  
   2006-02-27  Brouard Nicolas  <brouard@localhost>
   
         probabilities and covariance matrix          * imach.c (Module): One freematrix added in mlikeli!
   
   2006-02-26  Brouard Nicolas  <brouard@localhost>
   
           * imach.c (Module): Some improvements in processing parameter
           filename with strsep.
   
   2006-02-24  Brouard Nicolas  <brouard@localhost>
   
           * imach.c (Module): Memory leaks checks with valgrind and:
           datafile was not closed, some imatrix were not freed and on matrix
           allocation too.
   
   2006-02-09  LIEVRE Agnes  <lievre@PC_00697.ined.fr>
   
           * strsep.c (Module): Inclusion because not in mingw32!!!
   
           * setup.iss.in (Module): IMACHSETUPVERSION added
   
           * noreg-setup.iss (Module): added to cvs tree
   
           * Makefile (Module): IMACHSETUPVERSION added
   
   2006-01-30  BROUARD Nicolas  <brouard@localhost>
   
           * Makefile (Module, Module): Latest Makefile
   
           * imach.c (Module): Back to gnuplot.exe instead of wgnuplot.exe
   
   2006-01-27  BROUARD Nicolas  <brouard@localhost>
   
           * noreg-setup.iss (Module): ADDED
   
   2006-01-24  BROUARD Nicolas  <brouard@localhost>
   
           * imach.c (Module): Comments (lines starting with a #) are allowed in data.
   
   2005-10-25  Nicolas Brouard  <brouard@dhcp171.recherche.ined.fr>
   
           * Makefile (Module): Added Imach98.pmsp and howto crete a dmg
   
           * createdmg.sh (Module): Creates a dmg disk for MaC OS/X
   
   2005-09-30    <lievre@PC_00595>
   
           * imach.c (Module): sump fixed, loop imx fixed, and simplifications.
           (Module): If the status is missing at the last wave but we know
           that the person is alive, then we can code his/her status as -2
           (instead of missing=-1 in earlier versions) and his/her
           contributions to the likelihood is 1 - Prob of dying from last
           health status (= 1-p13= p11+p12 in the easiest case of somebody in
           the healthy state at last known wave). Version is 0.98 
   
   2004-05-20  Brouard Nicolas  <brouard@localhost>
   
           * imach.c (Repository): 
           Agnes added a direct estimation of mortality (without the need of
           computing period prevalence and differential mortality). Thus here
           is version 0.97a which has been distributed to some people at
           REVES 16 in Brugge using an Inno setup.exe for PCs. Estimates of
           mortality using covariates is not done today. Estimating direct
           mortality is a very different process because it doesn't need
           interpolation because it is easy to get the lx from the force of
           the mortality mux in the simplest case as for a Gompertz (log mux
           = a + b*x . But we have been able to incorporate the new code
           within former imach program (0.96d) without deteriorating too much
           the understanding of the program. 
   
   2003-06-25    <brouard@BROUARD>
   
           * imach.c (Module): On windows (cygwin) function asctime_r doesn't
           exist so I changed back to asctime which exists.
           (Module): Version 0.96b
   
   2003-06-24    <brouard@BROUARD>
   
           * imach.c (Module): Some bugs corrected for windows. Also, when
           mle=-1 a template is output in file "or"mypar.txt with the design
           of the covariance matrix to be input.
   
   2003-06-25  Brouard Nicolas  <brouard@homebrou>
   
           * imach.c (Repository): Duplicated warning errors corrected.
           (Repository): Elapsed time after each iteration is now output. It
           helps to forecast when convergence will be reached. Elapsed time
           is stamped in powell.  We created a new html file for the graphs
           concerning matrix of covariance. It has extension -cov.htm.
   
   2003-06-23  Brouard Nicolas  <brouard@homebrou>
   
           * imach.c (Repository): Create a sub-directory where all the secondary files are. Only imach, htm, gp and r(imach) are on the main directory. Correct time and other things.
   
   2003-06-18  Brouard Nicolas  <brouard@homebrou>
   
           * imach.c (Repository): Suppress abusive calls to append to file html (solution was to put fichtm as a global variable. Version 0.96
   
   2003-06-17  Brouard Nicolas  <brouard@homebrou>
   
   
           * imach.c (Repository): Check when date of death was earlier that
           current date of interview. It may happen when the death was just
           prior to the death. In this case, dh was negative and likelihood
           was wrong (infinity). We still send an "Error" but patch by
           assuming that the date of death was just one stepm after the
           interview.
           (Repository): Because some people have very long ID (first column)
           we changed int to long in num[] and we added a new lvector for
           memory allocation. But we also truncated to 8 characters (left
           truncation)
   
           (Repository): No more line truncation errors.
   
   2003-06-14  Brouard Nicolas  <brouard@homebrou>
   
           * imach.c (Repository): Add of a routine likelione (likelihood
           only once) which prints on a text file
           (ilk) the contributions to the likelihood for each
           individual/wave.
   
   2003-06-13  Brouard Nicolas  <brouard@homebrou>
           * imach.c (Repository): Replace "freqsummary" at a correct
           place. It differs from routine "prevalence" which may be called
           many times. Probs is memory consuming and must be used with
           parcimony.
   
   2003-06-17    <brouard@BROUARD>
   
           * timeval.h (Module): Added included file to make use of
           gettimeofday working on win32 with cygwin.
   
   2003-05-16  Brouard Nicolas  <brouard@brouard>
           * imach.c (Module): Insert of a warning if the delay between two
           waves is negative.
   
           * imach.c (Module): 
   
   2003-05-03    <brouard@BROUARD>
   
           * imach.c: Some cleaning
   
   2003-03-28    <brouard@BROUARD>
           * imach.c (Module): In version up to 0.92 likelihood was computed
           as if date of death was unknown. Death was treated as any other
           health state: the date of the interview describes the actual state
           and not the date of a change in health state. The former idea was
           to consider that at each interview the state was recorded
           (healthy, disable or death) and IMaCh was corrected; but when we
           introduced the exact date of death then we should have modified
           the contribution of an exact death to the likelihood. This new
           contribution is smaller and very dependent of the step unit
           stepm. It is no more the probability to die between last interview
           and month of death but the probability to survive from last
           interview up to one month before death multiplied by the
           probability to die within a month. Thanks to Chris
           Jackson for correcting this bug.  Former versions increased
           mortality artificially. The bad side is that we add another loop
           which slows down the processing. The difference can be up to 10%
           lower mortality.
   
   2002-05-30    <brouard@BROUARD>
   
           * imach.c (Module): Add correlation matrix of one-step
           probabilities and covariance matrix
   

Removed from v.1.40  
changed lines
  Added in v.1.67


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