Annotation of imach/src/ChangeLog, revision 1.38
1.38 ! brouard 1: 2018-05-02 Brouard Nicolas <brouard@brouard-antoine.homelinux.com>
! 2:
! 3: * imach.c: Summary: Some bugs fixed
! 4:
! 5: 2018-05-01 Brouard Nicolas <brouard@brouard-antoine.homelinux.com>
! 6:
! 7: * imach.c:
! 8: Summary: Bug fixed by providing frequencies only for non missing covariates
! 9:
! 10: 2018-04-27 Brouard Nicolas <brouard@brouard-antoine.homelinux.com>
! 11:
! 12: * imach.c: Summary: some minor bugs
! 13:
! 14: 2018-04-21 Brouard Nicolas <brouard@brouard-antoine.homelinux.com>
! 15:
! 16: * README.txt: *** empty log message ***
! 17:
! 18: * imach.c: Summary: Some bugs fixed, valgrind tested
! 19:
! 20: 2018-04-20 Brouard Nicolas <brouard@brouard-antoine.homelinux.com>
! 21:
! 22: * Makefile, README.txt, setup.iss: Summary: imach 0.99r16
! 23:
! 24: * imach.c:
! 25: Summary: Computing mean and stdeviation of fixed quantitative variables
! 26:
! 27: 2018-04-19 Brouard Nicolas <brouard@brouard-antoine.homelinux.com>
! 28:
! 29: * imach.c: Summary: Some minor bugs fixed
! 30:
! 31: * version.h: *** empty log message ***
! 32:
! 33: 2018-02-27 Brouard Nicolas <brouard@brouard-antoine.homelinux.com>
! 34:
! 35: * imach.c: *** empty log message ***
! 36:
! 37: * imach.c: Summary: Adding second argument for quitting
! 38:
! 39: 2018-02-21 Brouard Nicolas <brouard@brouard-antoine.homelinux.com>
! 40:
! 41: * Makefile, README.txt, imach.c: Summary: 0.99r15
! 42:
! 43: New Makefile with recent VirtualBox 5.26. Bug in sqrt negatve in imach.c
! 44:
! 45: 2017-07-20 Brouard Nicolas <brouard@brouard-antoine.homelinux.com>
! 46:
! 47: * imach.c: Summary: temporary working
! 48:
! 49: 2017-07-19 Brouard Nicolas <brouard@brouard-antoine.homelinux.com>
! 50:
! 51: * imach.c: Summary: Bug for mobil_average=0 and prevforecast fixed(?)
! 52:
! 53: 2017-07-17 Brouard Nicolas <brouard@brouard-antoine.homelinux.com>
! 54:
! 55: * imach.c: Summary: BOM files can be read now
! 56:
! 57: 2017-06-30 Brouard Nicolas <brouard@brouard-antoine.homelinux.com>
! 58:
! 59: * imach.c: Summary: Graphs improvements
! 60:
! 61: * imach.c: Summary: Saito's color
! 62:
! 63: 2017-06-29 Brouard Nicolas <brouard@brouard-antoine.homelinux.com>
! 64:
! 65: * imach.c: Summary: Version 0.99r14
! 66:
! 67: 2017-06-27 Brouard Nicolas <brouard@brouard-antoine.homelinux.com>
! 68:
! 69: * imach.c: Summary: More documentation on projections
! 70:
! 71: * imach.c: Summary: Color of backprojection changed from 6 to 5(yellow)
! 72:
! 73: * imach.c: Summary: Some bug with rint
! 74:
! 75: 2017-05-24 Brouard Nicolas <brouard@brouard-antoine.homelinux.com>
! 76:
! 77: * imach.c: *** empty log message ***
! 78:
! 79: 2017-05-23 Brouard Nicolas <brouard@brouard-antoine.homelinux.com>
! 80:
! 81: * imach.c: Summary: Code into subroutine, cleanings
! 82:
! 83: 2017-05-18 Brouard Nicolas <brouard@brouard-antoine.homelinux.com>
! 84:
! 85: * imach.c:
! 86: Summary: backprojection and confidence intervals of backprevalence
! 87:
! 88: 2017-05-13 Brouard Nicolas <brouard@brouard-antoine.homelinux.com>
! 89:
! 90: * imach.c: Summary: temporary save for backprojection
! 91:
! 92: * imach.c: Summary: Version 0.99r13 (improvements and bugs fixed)
! 93:
! 94: 2017-04-26 Brouard Nicolas <brouard@brouard-antoine.homelinux.com>
! 95:
! 96: * imach.c: Summary: imach 0.99r13 Some bugs fixed
! 97:
! 98: * imach.c: Summary: Labels in graphs
! 99:
! 100: 2017-04-24 Brouard Nicolas <brouard@brouard-antoine.homelinux.com>
! 101:
! 102: * imach.c: Summary: to save
! 103:
! 104: 2017-04-18 Brouard Nicolas <brouard@brouard-antoine.homelinux.com>
! 105:
! 106: * imach.c: *** empty log message ***
! 107:
! 108: 2017-04-05 Brouard Nicolas <brouard@brouard-antoine.homelinux.com>
! 109:
! 110: * imach.c: Summary: Bug in E_ as well as in T_ fixed nres-1 vs k1-1
! 111:
! 112: 2017-04-04 Brouard Nicolas <brouard@brouard-antoine.homelinux.com>
! 113:
! 114: * imach.c: Summary: Gnuplot indexations fixed (humm)
! 115:
! 116: * imach.c:
! 117: Summary: Some errors to warnings only if date of death is unknown but status is death we could set to pi3
! 118:
! 119: 2017-04-03 Brouard Nicolas <brouard@brouard-antoine.homelinux.com>
! 120:
! 121: * imach.c: Summary: Version 0.99r12
! 122:
! 123: Some cleanings, conformed with updated documentation.
! 124:
! 125: 2017-03-30 Brouard Nicolas <brouard@brouard-antoine.homelinux.com>
! 126:
! 127: * version.h: *** empty log message ***
! 128:
! 129: * version.h: Summary:0.99r11
! 130:
! 131: 2017-03-29 Brouard Nicolas <brouard@brouard-antoine.homelinux.com>
! 132:
! 133: * imach.c: Summary: Temp
! 134:
! 135: 2017-03-27 Brouard Nicolas <brouard@brouard-antoine.homelinux.com>
! 136:
! 137: * imach.c: Summary: Temporary
! 138:
! 139: 2017-03-08 Brouard Nicolas <brouard@brouard-antoine.homelinux.com>
! 140:
! 141: * imach.c: Summary: IMaCh version 0.99r10 bugs in gnuplot fixed
! 142:
! 143: * imach.c: Summary: Fixing data parameter line
! 144:
! 145: 2016-12-15 Brouard Nicolas <brouard@brouard-antoine.homelinux.com>
! 146:
! 147: * imach.c: Summary: 0.99 in progress
! 148:
! 149: 2016-09-15 Brouard Nicolas <brouard@brouard-antoine.homelinux.com>
! 150:
! 151: * imach.c: *** empty log message ***
! 152:
! 153: * imach.c: Summary: not working
! 154:
! 155: 2016-09-08 Brouard Nicolas <brouard@brouard-antoine.homelinux.com>
! 156:
! 157: * imach.c: Summary: continue
! 158:
! 159: 2016-09-07 Brouard Nicolas <brouard@brouard-antoine.homelinux.com>
! 160:
! 161: * imach.c: Summary: Starting values from frequencies
! 162:
! 163: * imach.c: *** empty log message ***
! 164:
! 165: 2016-09-02 Brouard Nicolas <brouard@brouard-antoine.homelinux.com>
! 166:
! 167: * imach.c: *** empty log message ***
! 168:
! 169: 2016-08-30 Brouard Nicolas <brouard@brouard-antoine.homelinux.com>
! 170:
! 171: * imach.c: Summary: Fixing a lots
! 172:
! 173: 2016-08-29 Brouard Nicolas <brouard@brouard-antoine.homelinux.com>
! 174:
! 175: * imach.c: Summary: gnuplot problem in Back projection to fix
! 176:
! 177: * imach.c: Summary: Better
! 178:
! 179: 2016-08-26 Brouard Nicolas <brouard@brouard-antoine.homelinux.com>
! 180:
! 181: * imach.c:
! 182: Summary: Improvement in Powell output in order to copy and paste
! 183:
! 184: Author:
! 185:
! 186: * imach.c: Summary: Starting tests of 0.99
! 187:
! 188: * imach.c: Summary: to valgrind
! 189:
! 190: 2016-08-25 Brouard Nicolas <brouard@brouard-antoine.homelinux.com>
! 191:
! 192: * imach.c: *** empty log message ***
! 193:
! 194: 2016-08-23 Brouard Nicolas <brouard@brouard-antoine.homelinux.com>
! 195:
! 196: * imach.c: *** empty log message ***
! 197:
! 198: * imach.c: Summary: not working
! 199:
! 200: 2016-08-22 Brouard Nicolas <brouard@brouard-antoine.homelinux.com>
! 201:
! 202: * imach.c: Summary: not working
! 203:
! 204: * imach.c: Summary: Not working
! 205:
! 206: 2016-07-23 Brouard Nicolas <brouard@brouard-antoine.homelinux.com>
! 207:
! 208: * imach.c: Summary: Completing for func too
! 209:
! 210: 2016-07-22 Brouard Nicolas <brouard@brouard-antoine.homelinux.com>
! 211:
! 212: * imach.c: Summary: Fixing some arrays, still debugging
! 213:
! 214: 2016-07-21 Brouard Nicolas <brouard@brouard-antoine.homelinux.com>
! 215:
! 216: * imach.c:
! 217: Summary: 0.99 working (more or less) for Asian Workshop on multitate methods
! 218:
! 219: 2016-07-12 Brouard Nicolas <brouard@brouard-antoine.homelinux.com>
! 220:
! 221: * imach.c: Summary: temp
! 222:
! 223: * imach.c: Summary: saving but not running
! 224:
! 225: 2016-07-01 Brouard Nicolas <brouard@brouard-antoine.homelinux.com>
! 226:
! 227: * imach.c: Summary: Fixes
! 228:
! 229: 2016-02-19 Brouard Nicolas <brouard@brouard-antoine.homelinux.com>
! 230:
! 231: * imach-0.98r.c: Summary: Kind of 0.98r? series, starting with r7
! 232:
! 233: * setup.iss, Makefile, version.h: *** empty log message ***
! 234:
! 235: * imach.c: Summary: temporary
! 236:
! 237: 2016-02-17 Brouard Nicolas <brouard@brouard-antoine.homelinux.com>
! 238:
! 239: * imach.c: Summary: Probably last 0.98 stable version 0.98r6
! 240:
! 241: 2016-02-16 Brouard Nicolas <brouard@brouard-antoine.homelinux.com>
! 242:
! 243: * imach.c: Summary: minor bug
! 244:
! 245: * imach.c: Summary: 0.99r2
! 246:
! 247: 2016-02-15 Brouard Nicolas <brouard@brouard-antoine.homelinux.com>
! 248:
! 249: * imach.c: *** empty log message ***
! 250:
! 251: 2016-02-12 Brouard Nicolas <brouard@brouard-antoine.homelinux.com>
! 252:
! 253: * imach.c: Summary: 0.99 Back projections
! 254:
! 255: 2015-12-23 Brouard Nicolas <brouard@brouard-antoine.homelinux.com>
! 256:
! 257: * imach.c: Summary: Experimental backcast
! 258:
! 259: 2015-12-18 Brouard Nicolas <brouard@brouard-antoine.homelinux.com>
! 260:
! 261: * imach.c: Summary: 0.98r4 Warning and status=-2
! 262:
! 263: Version 0.98r4 is now:
! 264: - displaying an error when status is -1, date of interview unknown and date of death known;
! 265: - permitting a status -2 when the vital status is unknown at a known date of right truncation.
! 266: Older changes concerning s=-2, dating from 2005 have been supersed.
! 267:
! 268: * Makefile: *** empty log message ***
! 269:
! 270: 2015-12-16 Brouard Nicolas <brouard@brouard-antoine.homelinux.com>
! 271:
! 272: * Makefile: *** empty log message ***
! 273:
! 274: * imach.c: Summary: 0.98r4 working
! 275:
! 276: * Makefile: Summary: linuxrpm added
! 277:
! 278: * Makefile: *** empty log message ***
! 279:
! 280: * imach.c: Summary: temporary not working
! 281:
! 282: 2015-12-11 Brouard Nicolas <brouard@brouard-antoine.homelinux.com>
! 283:
! 284: * imach.c: Summary: 0.98r4
! 285:
! 286: 2015-12-08 Brouard Nicolas <brouard@brouard-antoine.homelinux.com>
! 287:
! 288: * Makefile: *** empty log message ***
! 289:
! 290: 2015-11-21 Brouard Nicolas <brouard@brouard-antoine.homelinux.com>
! 291:
! 292: * Makefile:
! 293: Summary: VBoxManage change from execute --image to run --exe and --wait-exit doesn't exist any more
! 294:
! 295: * imach.c: Summary: minor typo
! 296:
! 297: * imach.c: Summary: 0.98r3 with some graph of projected cross-sectional
! 298:
! 299: Author: Nicolas Brouard
! 300:
! 301: 2015-11-18 Brouard Nicolas <brouard@brouard-antoine.homelinux.com>
! 302:
! 303: * imach.c: Summary: Start working on projected prevalences
! 304:
! 305: 2015-11-17 Brouard Nicolas <brouard@brouard-antoine.homelinux.com>
! 306:
! 307: * imach.c: Summary: Adding ftolpl parameter
! 308: Author: N Brouard
! 309:
! 310: We had difficulties to get smoothed confidence intervals. It was due
! 311: to the period prevalence which wasn't computed accurately. The inner
! 312: parameter ftolpl is now an outer parameter of the .imach parameter
! 313: file after estepm. If ftolpl is small 1.e-4 and estepm too,
! 314: computation are long.
! 315:
! 316: * version.h: *** empty log message ***
! 317:
! 318: * imach.c: Summary: temporary
! 319:
! 320: 2015-10-27 Brouard Nicolas <brouard@brouard-antoine.homelinux.com>
! 321:
! 322: * Makefile: *** empty log message ***
! 323:
! 324: * setup.iss.in: Summary: some new subdirs
! 325:
! 326: * imach.c: *** empty log message ***
! 327:
! 328: * setup.iss.in:
! 329: Summary: Adding gnuplot 5.1 with bin and etc for pango fonts
! 330:
! 331: 2015-10-24 Brouard Nicolas <brouard@brouard-antoine.homelinux.com>
! 332:
! 333: * imach.c: *** empty log message ***
! 334:
! 335: 2015-10-23 Brouard Nicolas <brouard@brouard-antoine.homelinux.com>
! 336:
! 337: * imach.c:
! 338: Summary: 0.98r3 some clarification for graphs on likelihood contributions
! 339:
! 340: 2015-10-01 Brouard Nicolas <brouard@brouard-antoine.homelinux.com>
! 341:
! 342: * imach.c: Summary: Some new graphs of contribution to likelihood
! 343:
! 344: 2015-09-30 Brouard Nicolas <brouard@brouard-antoine.homelinux.com>
! 345:
! 346: * Makefile:
! 347: Summary: Version read from version.h, itself read with cmake
! 348:
! 349: * imach.c: Summary: looking at better estimation of the hessian
! 350:
! 351: Also a better criteria for convergence to the period prevalence And
! 352: therefore adding the number of years needed to converge. (The
! 353: prevalence in any alive state shold sum to one
! 354:
! 355: * Makefile: *** empty log message ***
! 356:
! 357: 2015-09-22 Brouard Nicolas <brouard@brouard-antoine.homelinux.com>
! 358:
! 359: * imach.c:
! 360: Summary: Adding some overall graph on contribution to likelihood. Might change
! 361:
! 362: 2015-09-15 Brouard Nicolas <brouard@brouard-antoine.homelinux.com>
! 363:
! 364: * Makefile: *** empty log message ***
! 365:
! 366: * imach.c: Summary: 0.98r0
! 367:
! 368: - Some new graphs like suvival functions
! 369: - Some bugs fixed like model=1+age+V2.
! 370:
! 371: * ChangeLog, Makefile: Summary: 0.98r0
! 372:
! 373: * CMakeLists.txt: Summary: Some tests for setup.iss
! 374:
1.37 brouard 375: 2015-09-15 Nicolas J Brouard <nbrouard@tugault.ined.fr>
376:
377: * (Module): 0.98r0 Some new graphs, some bugs fixed: model=1+age+V2. etc
378:
1.36 brouard 379: 2015-08-18 Nicolas J Brouard <nbrouard@tugault.local>
380:
381: * (Module): Adding error when the covariance matrix doesn't contain the exact number of lines required by the model line.
382:
1.35 brouard 383: 2015-08-03 Nicolas J Brouard <nbrouard@tugault.ined.fr>
384:
385: * (Module): Changing Variance of one-step probabilities into Standard deviation (thanks to Yao-Chi Shih)
386:
387: 2014-12-16 Nicolas J Brouard <nbrouard@tugault.local>
388:
389: * imach.c (Module): Merging 1.61 to 1.162
390:
391: 2014-09-02 Nicolas J Brouard <nbrouard@njbrouard.ined.fr>
392:
393: * prevlim.h (Module):
394:
1.34 brouard 395: 2014-01-26 Nicolas J Brouard <nbrouard@ledermann-2.local>
396:
397: * imach.c (Module): Trying to merge old staffs together while being at Tokyo. Not tested...
398: (Module): Version 0.98nR Running ok, but output format still only works for three covariates.
399:
1.33 brouard 400: 2010-04-29 brouard <brouard@ined.fr>
401:
402: * imach.c (Module): Checking covariates for more complex models
403: than V1+V2. A lot of change to be done. Unstable.
404:
405: 2010-04-26 brouard <brouard@ined.fr>
406:
407: * imach.c (Module): merging some libgsl code. Fixing computation
408: of likelione (using inter/intrapolation if mle = 0) in order to
409: get same likelihood as if mle=1.
410: Some cleaning of code and comments added.
411:
1.32 brouard 412: 2009-10-29 brouard <brouard@ined.fr>
413:
414: * imach.c (Module): Now imach stops if date of birth, at least year of birth, is not given. Some cleaning of the code.
415:
1.31 brouard 416: 2006-06-30 Brouard Nicolas <brouard@localhost>
417:
418: * imach.c (Module): Clarifications on computing e.j
419:
1.30 brouard 420: 2006-04-28 Brouard Nicolas <brouard@localhost>
421:
422: * imach.c (Module): Yes the sum of survivors was wrong since
423: imach-114 because nhstepm was no more computed in the age
424: loop. Now we define nhstepma in the age loop.
1.31 brouard 425: (Module): In order to speed up (in case of numerous covariates) we
426: compute health expectancies (without variances) in a first step
427: and then all the health expectancies with variances or standard
428: deviation (needs data from the Hessian matrices) which slows the
429: computation.
430: In the future we should be able to stop the program is only health
431: expectancies and graph are needed without standard deviations.
1.30 brouard 432:
1.29 lievre 433: 2006-04-04 LIEVRE Agnes <lievre@PC_00697.ined.fr>
434:
435: * imach.iss (Module):
436:
437: * imach.c (Module): bugs in evsi + population file added in htm output file
438:
439: 2006-03-22 LIEVRE Agnes <lievre@PC_00697.ined.fr>
440:
441: * imach.c (Module):
442:
1.27 brouard 443: 2006-03-20 Brouard Nicolas <brouard@localhost>
444:
1.28 brouard 445: * imach.c (Module): <title> changed, corresponds to .htm file
446: name. <head> headers where missing.
447:
1.27 brouard 448: * Makefile (Module): 0.98g
449:
450: * imach.c (Module): Weights can have a decimal point as for
451: English (a comma might work with a correct LC_NUMERIC environment,
452: otherwise the weight is truncated).
453: Modification of warning when the covariates values are not 0 or
454: 1.
455: Version 0.98g
456:
1.24 lievre 457: 2006-03-16 LIEVRE Agnes <lievre@PC_00697.ined.fr>
458:
1.26 lievre 459: * imach.c (Module): Comments concerning covariates added
460:
1.25 lievre 461: * noreg-setup.iss (Module): Version 0.98f
462:
1.24 lievre 463: * Makefile (Module): Version 0.98f make _windows=1 imachcyg-setup
464:
465: * imach.c (Module): refinements in the computation of lli if
466: status=-2 in order to have more reliable computation if stepm is
467: not 1 month. Version 0.98f
468:
1.22 brouard 469: 2006-03-15 Brouard Nicolas <brouard@localhost>
470:
471: * imach.c (Module): Bug if status = -2, the loglikelihood was
472: computed as likelihood omitting the logarithm. Version O.98e
473:
1.21 brouard 474: 2006-03-14 Brouard Nicolas <brouard@localhost>
475:
476: * imach.c (Module): varevsij Comments added explaining the second
477: table of variances if popbased=1 .
478: (Module): Covariances of eij, ekl added, graphs fixed, new html link.
479: (Module): Function pstamp added
480: (Module): Version 0.98d
481:
1.20 brouard 482: 2006-03-06 Brouard Nicolas <brouard@localhost>
483:
484: * imach.c (Module): Variance-covariance wrong links and
485: varian-covariance of ej. is needed (Saito).
486:
1.19 brouard 487: 2006-02-27 Brouard Nicolas <brouard@localhost>
488:
489: * imach.c (Module): One freematrix added in mlikeli!
490:
491: 2006-02-26 Brouard Nicolas <brouard@localhost>
492:
493: * imach.c (Module): Some improvements in processing parameter
494: filename with strsep.
495:
496: 2006-02-24 Brouard Nicolas <brouard@localhost>
497:
498: * imach.c (Module): Memory leaks checks with valgrind and:
499: datafile was not closed, some imatrix were not freed and on matrix
500: allocation too.
501:
1.16 lievre 502: 2006-02-09 LIEVRE Agnes <lievre@PC_00697.ined.fr>
503:
1.18 lievre 504: * strsep.c (Module): Inclusion because not in mingw32!!!
505:
1.17 lievre 506: * setup.iss.in (Module): IMACHSETUPVERSION added
507:
508: * noreg-setup.iss (Module): added to cvs tree
509:
1.16 lievre 510: * Makefile (Module): IMACHSETUPVERSION added
511:
1.15 brouard 512: 2006-01-30 BROUARD Nicolas <brouard@localhost>
513:
1.23 brouard 514: * Makefile (Module, Module): Latest Makefile
515:
1.15 brouard 516: * imach.c (Module): Back to gnuplot.exe instead of wgnuplot.exe
517:
518: 2006-01-27 BROUARD Nicolas <brouard@localhost>
519:
520: * noreg-setup.iss (Module): ADDED
521:
522: 2006-01-24 BROUARD Nicolas <brouard@localhost>
523:
524: * imach.c (Module): Comments (lines starting with a #) are allowed in data.
525:
1.14 brouard 526: 2005-10-25 Nicolas Brouard <brouard@dhcp171.recherche.ined.fr>
527:
528: * Makefile (Module): Added Imach98.pmsp and howto crete a dmg
529:
530: * createdmg.sh (Module): Creates a dmg disk for MaC OS/X
531:
1.12 lievre 532: 2005-09-30 <lievre@PC_00595>
533:
534: * imach.c (Module): sump fixed, loop imx fixed, and simplifications.
1.13 lievre 535: (Module): If the status is missing at the last wave but we know
536: that the person is alive, then we can code his/her status as -2
537: (instead of missing=-1 in earlier versions) and his/her
538: contributions to the likelihood is 1 - Prob of dying from last
539: health status (= 1-p13= p11+p12 in the easiest case of somebody in
540: the healthy state at last known wave). Version is 0.98
1.12 lievre 541:
1.11 brouard 542: 2004-05-20 Brouard Nicolas <brouard@localhost>
543:
544: * imach.c (Repository):
545: Agnes added a direct estimation of mortality (without the need of
546: computing period prevalence and differential mortality). Thus here
547: is version 0.97a which has been distributed to some people at
548: REVES 16 in Brugge using an Inno setup.exe for PCs. Estimates of
549: mortality using covariates is not done today. Estimating direct
550: mortality is a very different process because it doesn't need
551: interpolation because it is easy to get the lx from the force of
552: the mortality mux in the simplest case as for a Gompertz (log mux
553: = a + b*x . But we have been able to incorporate the new code
554: within former imach program (0.96d) without deteriorating too much
555: the understanding of the program.
556:
1.10 brouard 557: 2003-06-25 <brouard@BROUARD>
558:
559: * imach.c (Module): On windows (cygwin) function asctime_r doesn't
560: exist so I changed back to asctime which exists.
561: (Module): Version 0.96b
562:
563: 2003-06-24 <brouard@BROUARD>
564:
565: * imach.c (Module): Some bugs corrected for windows. Also, when
566: mle=-1 a template is output in file "or"mypar.txt with the design
567: of the covariance matrix to be input.
568:
1.9 brouard 569: 2003-06-25 Brouard Nicolas <brouard@homebrou>
570:
571: * imach.c (Repository): Duplicated warning errors corrected.
572: (Repository): Elapsed time after each iteration is now output. It
573: helps to forecast when convergence will be reached. Elapsed time
574: is stamped in powell. We created a new html file for the graphs
575: concerning matrix of covariance. It has extension -cov.htm.
576:
1.8 brouard 577: 2003-06-23 Brouard Nicolas <brouard@homebrou>
578:
579: * imach.c (Repository): Create a sub-directory where all the secondary files are. Only imach, htm, gp and r(imach) are on the main directory. Correct time and other things.
580:
581: 2003-06-18 Brouard Nicolas <brouard@homebrou>
582:
583: * imach.c (Repository): Suppress abusive calls to append to file html (solution was to put fichtm as a global variable. Version 0.96
584:
1.7 brouard 585: 2003-06-17 Brouard Nicolas <brouard@homebrou>
586:
587:
588: * imach.c (Repository): Check when date of death was earlier that
589: current date of interview. It may happen when the death was just
590: prior to the death. In this case, dh was negative and likelihood
591: was wrong (infinity). We still send an "Error" but patch by
592: assuming that the date of death was just one stepm after the
593: interview.
594: (Repository): Because some people have very long ID (first column)
595: we changed int to long in num[] and we added a new lvector for
596: memory allocation. But we also truncated to 8 characters (left
597: truncation)
598:
599: (Repository): No more line truncation errors.
600:
601: 2003-06-14 Brouard Nicolas <brouard@homebrou>
602:
603: * imach.c (Repository): Add of a routine likelione (likelihood
604: only once) which prints on a text file
605: (ilk) the contributions to the likelihood for each
606: individual/wave.
607:
608: 2003-06-13 Brouard Nicolas <brouard@homebrou>
609: * imach.c (Repository): Replace "freqsummary" at a correct
610: place. It differs from routine "prevalence" which may be called
611: many times. Probs is memory consuming and must be used with
612: parcimony.
613:
614: 2003-06-17 <brouard@BROUARD>
615:
616: * timeval.h (Module): Added included file to make use of
617: gettimeofday working on win32 with cygwin.
618:
619: 2003-05-16 Brouard Nicolas <brouard@brouard>
620: * imach.c (Module): Insert of a warning if the delay between two
621: waves is negative.
622:
623: * imach.c (Module):
624:
625: 2003-05-03 <brouard@BROUARD>
626:
627: * imach.c: Some cleaning
628:
629: 2003-03-28 <brouard@BROUARD>
630: * imach.c (Module): In version up to 0.92 likelihood was computed
631: as if date of death was unknown. Death was treated as any other
632: health state: the date of the interview describes the actual state
633: and not the date of a change in health state. The former idea was
634: to consider that at each interview the state was recorded
635: (healthy, disable or death) and IMaCh was corrected; but when we
636: introduced the exact date of death then we should have modified
637: the contribution of an exact death to the likelihood. This new
638: contribution is smaller and very dependent of the step unit
639: stepm. It is no more the probability to die between last interview
640: and month of death but the probability to survive from last
641: interview up to one month before death multiplied by the
642: probability to die within a month. Thanks to Chris
643: Jackson for correcting this bug. Former versions increased
644: mortality artificially. The bad side is that we add another loop
645:
646:
647: which slows down the processing. The difference can be up to 10%
648:
649:
650: lower mortality.
651:
652:
653:
654:
655:
656: 2002-05-30 <brouard@BROUARD>
657:
658:
659:
660:
661:
662: *
663:
664:
665:
666:
667:
668: * imach.c (Module): Add correlation matrix of one-step
669:
670:
671: probabilities and covariance matrix
672:
673:
674:
675:
676:
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