Annotation of imach/src/ChangeLog, revision 1.41
1.41 ! brouard 1: 2021-02-11 Nicolas J Brouard <nbrouard@mac02049.local>
! 2:
! 3: * (Module): imach.c Someone entered 'results:' instead of 'result:'. Now it is an error which is printed.
! 4:
1.40 brouard 5: 2020-02-22 Brouard Nicolas <brouard@brouard.name>
6:
7: * (Module): imach.c Update mle=-3 (for computing Life expectancy
8: and life table from the data without any state)
9:
1.39 brouard 10: 2019-05-20 Brouard Nicolas <brouard@brouard.name>
11:
12: * version.h: Summary: version 0.99.r19
13:
14: * imach.c: Summary: Projection syntax simplified
15: We can now start projections, forward or backward, from the mean date
16: of inteviews up to or down to a number of years of projection:
17: prevforecast=1 yearsfproj=15.3 mobil_average=0
18: or
19: prevforecast=1 starting-proj-date=1/1/2007 final-proj-date=12/31/2017 mobil_average=0
20: or
21: prevbackcast=1 yearsbproj=12.3 mobil_average=1
22: or
23: prevbackcast=1 starting-back-date=1/10/1999 final-back-date=1/1/1985 mobil_average=1
24:
25: 2019-05-18 Brouard Nicolas <brouard@brouard.name>
26:
27: * imach.c: Summary: doxygen tex bug
28:
29: 2019-05-16 Brouard Nicolas <brouard@brouard.name>
30:
31: * imach.c: Summary: There was some wrong lines added
32:
33: 2019-05-09 Brouard Nicolas <brouard@brouard.name>
34:
35: * Makefile, imach.c: *** empty log message ***
36:
37: * ChangeLog: Summary: C=
38:
39: * imach.c: Summary: Some updates
40:
41: * imach.c: Summary: Before ncovmax
42:
43: * version.h: *** empty log message ***
44:
45: * imach.c: Summary: 0.99r18 unlimited number of individuals
46: The number n which was limited to 20,000 cases is now unlimited, from firstobs to lastobs. If the number is too for the virtual memory, probably an error will occur.
47:
48: 2018-12-13 Brouard Nicolas <brouard@brouard.name>
49:
50: * imach.c: Summary: Bug for young ages (<-30) will be in r17
51:
52: 2018-12-05 Brouard Nicolas <brouard@brouard.name>
53:
54: * Makefile: Summary: 0.99r16
55:
56: 2018-05-02 Brouard Nicolas <brouard@brouard.name>
57:
58: * imach.c: Summary: Some bugs fixed
59:
60: 2018-05-02 Brouard Nicolas <brouard@brouard-antoine.homelinux.com>
61:
62: * imach.c: Summary: Bug for young ages (<-30) will be in r17
63:
1.38 brouard 64: 2018-05-02 Brouard Nicolas <brouard@brouard-antoine.homelinux.com>
65:
66: * imach.c: Summary: Some bugs fixed
67:
68: 2018-05-01 Brouard Nicolas <brouard@brouard-antoine.homelinux.com>
69:
70: * imach.c:
71: Summary: Bug fixed by providing frequencies only for non missing covariates
72:
73: 2018-04-27 Brouard Nicolas <brouard@brouard-antoine.homelinux.com>
74:
75: * imach.c: Summary: some minor bugs
76:
77: 2018-04-21 Brouard Nicolas <brouard@brouard-antoine.homelinux.com>
78:
79: * README.txt: *** empty log message ***
80:
81: * imach.c: Summary: Some bugs fixed, valgrind tested
82:
83: 2018-04-20 Brouard Nicolas <brouard@brouard-antoine.homelinux.com>
84:
85: * Makefile, README.txt, setup.iss: Summary: imach 0.99r16
86:
87: * imach.c:
88: Summary: Computing mean and stdeviation of fixed quantitative variables
89:
90: 2018-04-19 Brouard Nicolas <brouard@brouard-antoine.homelinux.com>
91:
92: * imach.c: Summary: Some minor bugs fixed
93:
94: * version.h: *** empty log message ***
95:
96: 2018-02-27 Brouard Nicolas <brouard@brouard-antoine.homelinux.com>
97:
98: * imach.c: *** empty log message ***
99:
100: * imach.c: Summary: Adding second argument for quitting
101:
102: 2018-02-21 Brouard Nicolas <brouard@brouard-antoine.homelinux.com>
103:
104: * Makefile, README.txt, imach.c: Summary: 0.99r15
105: New Makefile with recent VirtualBox 5.26. Bug in sqrt negatve in imach.c
106:
107: 2017-07-20 Brouard Nicolas <brouard@brouard-antoine.homelinux.com>
108:
109: * imach.c: Summary: temporary working
110:
111: 2017-07-19 Brouard Nicolas <brouard@brouard-antoine.homelinux.com>
112:
113: * imach.c: Summary: Bug for mobil_average=0 and prevforecast fixed(?)
114:
115: 2017-07-17 Brouard Nicolas <brouard@brouard-antoine.homelinux.com>
116:
117: * imach.c: Summary: BOM files can be read now
118:
119: 2017-06-30 Brouard Nicolas <brouard@brouard-antoine.homelinux.com>
120:
121: * imach.c: Summary: Graphs improvements
122:
123: * imach.c: Summary: Saito's color
124:
125: 2017-06-29 Brouard Nicolas <brouard@brouard-antoine.homelinux.com>
126:
127: * imach.c: Summary: Version 0.99r14
128:
129: 2017-06-27 Brouard Nicolas <brouard@brouard-antoine.homelinux.com>
130:
131: * imach.c: Summary: More documentation on projections
132:
133: * imach.c: Summary: Color of backprojection changed from 6 to 5(yellow)
134:
135: * imach.c: Summary: Some bug with rint
136:
137: 2017-05-24 Brouard Nicolas <brouard@brouard-antoine.homelinux.com>
138:
139: * imach.c: *** empty log message ***
140:
141: 2017-05-23 Brouard Nicolas <brouard@brouard-antoine.homelinux.com>
142:
143: * imach.c: Summary: Code into subroutine, cleanings
144:
145: 2017-05-18 Brouard Nicolas <brouard@brouard-antoine.homelinux.com>
146:
147: * imach.c:
148: Summary: backprojection and confidence intervals of backprevalence
149:
150: 2017-05-13 Brouard Nicolas <brouard@brouard-antoine.homelinux.com>
151:
152: * imach.c: Summary: temporary save for backprojection
153:
154: * imach.c: Summary: Version 0.99r13 (improvements and bugs fixed)
155:
156: 2017-04-26 Brouard Nicolas <brouard@brouard-antoine.homelinux.com>
157:
158: * imach.c: Summary: imach 0.99r13 Some bugs fixed
159:
160: * imach.c: Summary: Labels in graphs
161:
162: 2017-04-24 Brouard Nicolas <brouard@brouard-antoine.homelinux.com>
163:
164: * imach.c: Summary: to save
165:
166: 2017-04-18 Brouard Nicolas <brouard@brouard-antoine.homelinux.com>
167:
168: * imach.c: *** empty log message ***
169:
170: 2017-04-05 Brouard Nicolas <brouard@brouard-antoine.homelinux.com>
171:
172: * imach.c: Summary: Bug in E_ as well as in T_ fixed nres-1 vs k1-1
173:
174: 2017-04-04 Brouard Nicolas <brouard@brouard-antoine.homelinux.com>
175:
176: * imach.c: Summary: Gnuplot indexations fixed (humm)
177:
178: * imach.c:
179: Summary: Some errors to warnings only if date of death is unknown but status is death we could set to pi3
180:
181: 2017-04-03 Brouard Nicolas <brouard@brouard-antoine.homelinux.com>
182:
183: * imach.c: Summary: Version 0.99r12
184: Some cleanings, conformed with updated documentation.
185:
186: 2017-03-30 Brouard Nicolas <brouard@brouard-antoine.homelinux.com>
187:
188: * version.h: *** empty log message ***
189:
190: * version.h: Summary:0.99r11
191:
192: 2017-03-29 Brouard Nicolas <brouard@brouard-antoine.homelinux.com>
193:
194: * imach.c: Summary: Temp
195:
196: 2017-03-27 Brouard Nicolas <brouard@brouard-antoine.homelinux.com>
197:
198: * imach.c: Summary: Temporary
199:
200: 2017-03-08 Brouard Nicolas <brouard@brouard-antoine.homelinux.com>
201:
202: * imach.c: Summary: IMaCh version 0.99r10 bugs in gnuplot fixed
203:
204: * imach.c: Summary: Fixing data parameter line
205:
206: 2016-12-15 Brouard Nicolas <brouard@brouard-antoine.homelinux.com>
207:
208: * imach.c: Summary: 0.99 in progress
209:
210: 2016-09-15 Brouard Nicolas <brouard@brouard-antoine.homelinux.com>
211:
212: * imach.c: *** empty log message ***
213:
214: * imach.c: Summary: not working
215:
216: 2016-09-08 Brouard Nicolas <brouard@brouard-antoine.homelinux.com>
217:
218: * imach.c: Summary: continue
219:
220: 2016-09-07 Brouard Nicolas <brouard@brouard-antoine.homelinux.com>
221:
222: * imach.c: Summary: Starting values from frequencies
223:
224: * imach.c: *** empty log message ***
225:
226: 2016-09-02 Brouard Nicolas <brouard@brouard-antoine.homelinux.com>
227:
228: * imach.c: *** empty log message ***
229:
230: 2016-08-30 Brouard Nicolas <brouard@brouard-antoine.homelinux.com>
231:
232: * imach.c: Summary: Fixing a lots
233:
234: 2016-08-29 Brouard Nicolas <brouard@brouard-antoine.homelinux.com>
235:
236: * imach.c: Summary: gnuplot problem in Back projection to fix
237:
238: * imach.c: Summary: Better
239:
240: 2016-08-26 Brouard Nicolas <brouard@brouard-antoine.homelinux.com>
241:
242: * imach.c:
243: Summary: Improvement in Powell output in order to copy and paste
244:
245: * imach.c: Summary: Starting tests of 0.99
246:
247: * imach.c: Summary: to valgrind
248:
249: 2016-08-25 Brouard Nicolas <brouard@brouard-antoine.homelinux.com>
250:
251: * imach.c: *** empty log message ***
252:
253: 2016-08-23 Brouard Nicolas <brouard@brouard-antoine.homelinux.com>
254:
255: * imach.c: *** empty log message ***
256:
257: * imach.c: Summary: not working
258:
259: 2016-08-22 Brouard Nicolas <brouard@brouard-antoine.homelinux.com>
260:
261: * imach.c: Summary: not working
262:
263: * imach.c: Summary: Not working
264:
265: 2016-07-23 Brouard Nicolas <brouard@brouard-antoine.homelinux.com>
266:
267: * imach.c: Summary: Completing for func too
268:
269: 2016-07-22 Brouard Nicolas <brouard@brouard-antoine.homelinux.com>
270:
271: * imach.c: Summary: Fixing some arrays, still debugging
272:
273: 2016-07-21 Brouard Nicolas <brouard@brouard-antoine.homelinux.com>
274:
275: * imach.c:
276: Summary: 0.99 working (more or less) for Asian Workshop on multitate methods
277:
278: 2016-07-12 Brouard Nicolas <brouard@brouard-antoine.homelinux.com>
279:
280: * imach.c: Summary: temp
281:
282: * imach.c: Summary: saving but not running
283:
284: 2016-07-01 Brouard Nicolas <brouard@brouard-antoine.homelinux.com>
285:
286: * imach.c: Summary: Fixes
287:
288: 2016-02-19 Brouard Nicolas <brouard@brouard-antoine.homelinux.com>
289:
290: * imach-0.98r.c: Summary: Kind of 0.98r? series, starting with r7
291:
292: * setup.iss, Makefile, version.h: *** empty log message ***
293:
294: * imach.c: Summary: temporary
295:
296: 2016-02-17 Brouard Nicolas <brouard@brouard-antoine.homelinux.com>
297:
298: * imach.c: Summary: Probably last 0.98 stable version 0.98r6
299:
300: 2016-02-16 Brouard Nicolas <brouard@brouard-antoine.homelinux.com>
301:
302: * imach.c: Summary: minor bug
303:
304: * imach.c: Summary: 0.99r2
305:
306: 2016-02-15 Brouard Nicolas <brouard@brouard-antoine.homelinux.com>
307:
308: * imach.c: *** empty log message ***
309:
310: 2016-02-12 Brouard Nicolas <brouard@brouard-antoine.homelinux.com>
311:
312: * imach.c: Summary: 0.99 Back projections
313:
314: 2015-12-23 Brouard Nicolas <brouard@brouard-antoine.homelinux.com>
315:
316: * imach.c: Summary: Experimental backcast
317:
318: 2015-12-18 Brouard Nicolas <brouard@brouard-antoine.homelinux.com>
319:
320: * imach.c: Summary: 0.98r4 Warning and status=-2
321:
322: Version 0.98r4 is now:
323: - displaying an error when status is -1, date of interview unknown and date of death known;
324: - permitting a status -2 when the vital status is unknown at a known date of right truncation.
325: Older changes concerning s=-2, dating from 2005 have been supersed.
326:
327: * Makefile: *** empty log message ***
328:
329: 2015-12-16 Brouard Nicolas <brouard@brouard-antoine.homelinux.com>
330:
331: * Makefile: *** empty log message ***
332:
333: * imach.c: Summary: 0.98r4 working
334:
335: * Makefile: Summary: linuxrpm added
336:
337: * Makefile: *** empty log message ***
338:
339: * imach.c: Summary: temporary not working
340:
341: 2015-12-11 Brouard Nicolas <brouard@brouard-antoine.homelinux.com>
342:
343: * imach.c: Summary: 0.98r4
344:
345: 2015-12-08 Brouard Nicolas <brouard@brouard-antoine.homelinux.com>
346:
347: * Makefile: *** empty log message ***
348:
349: 2015-11-21 Brouard Nicolas <brouard@brouard-antoine.homelinux.com>
350:
351: * Makefile:
352: Summary: VBoxManage change from execute --image to run --exe and --wait-exit doesn't exist any more
353:
354: * imach.c: Summary: minor typo
355:
356: * imach.c: Summary: 0.98r3 with some graph of projected cross-sectional
357:
358: Author: Nicolas Brouard
359:
360: 2015-11-18 Brouard Nicolas <brouard@brouard-antoine.homelinux.com>
361:
362: * imach.c: Summary: Start working on projected prevalences
363:
364: 2015-11-17 Brouard Nicolas <brouard@brouard-antoine.homelinux.com>
365:
366: * imach.c: Summary: Adding ftolpl parameter
367: Author: N Brouard
368:
369: We had difficulties to get smoothed confidence intervals. It was due
370: to the period prevalence which wasn't computed accurately. The inner
371: parameter ftolpl is now an outer parameter of the .imach parameter
372: file after estepm. If ftolpl is small 1.e-4 and estepm too,
373: computation are long.
374:
375: * version.h: *** empty log message ***
376:
377: * imach.c: Summary: temporary
378:
379: 2015-10-27 Brouard Nicolas <brouard@brouard-antoine.homelinux.com>
380:
381: * Makefile: *** empty log message ***
382:
383: * setup.iss.in: Summary: some new subdirs
384:
385: * imach.c: *** empty log message ***
386:
387: * setup.iss.in:
388: Summary: Adding gnuplot 5.1 with bin and etc for pango fonts
389:
390: 2015-10-24 Brouard Nicolas <brouard@brouard-antoine.homelinux.com>
391:
392: * imach.c: *** empty log message ***
393:
394: 2015-10-23 Brouard Nicolas <brouard@brouard-antoine.homelinux.com>
395:
396: * imach.c:
397: Summary: 0.98r3 some clarification for graphs on likelihood contributions
398:
399: 2015-10-01 Brouard Nicolas <brouard@brouard-antoine.homelinux.com>
400:
401: * imach.c: Summary: Some new graphs of contribution to likelihood
402:
403: 2015-09-30 Brouard Nicolas <brouard@brouard-antoine.homelinux.com>
404:
405: * Makefile:
406: Summary: Version read from version.h, itself read with cmake
407:
408: * imach.c: Summary: looking at better estimation of the hessian
409:
410: Also a better criteria for convergence to the period prevalence And
411: therefore adding the number of years needed to converge. (The
412: prevalence in any alive state shold sum to one
413:
414: * Makefile: *** empty log message ***
415:
416: 2015-09-22 Brouard Nicolas <brouard@brouard-antoine.homelinux.com>
417:
418: * imach.c:
419: Summary: Adding some overall graph on contribution to likelihood. Might change
420:
421: 2015-09-15 Brouard Nicolas <brouard@brouard-antoine.homelinux.com>
422:
423: * Makefile: *** empty log message ***
424:
425: * imach.c: Summary: 0.98r0
426:
427: - Some new graphs like suvival functions
428: - Some bugs fixed like model=1+age+V2.
429:
430: * ChangeLog, Makefile: Summary: 0.98r0
431:
432: * CMakeLists.txt: Summary: Some tests for setup.iss
433:
1.37 brouard 434: 2015-09-15 Nicolas J Brouard <nbrouard@tugault.ined.fr>
435:
436: * (Module): 0.98r0 Some new graphs, some bugs fixed: model=1+age+V2. etc
437:
1.36 brouard 438: 2015-08-18 Nicolas J Brouard <nbrouard@tugault.local>
439:
440: * (Module): Adding error when the covariance matrix doesn't contain the exact number of lines required by the model line.
441:
1.35 brouard 442: 2015-08-03 Nicolas J Brouard <nbrouard@tugault.ined.fr>
443:
444: * (Module): Changing Variance of one-step probabilities into Standard deviation (thanks to Yao-Chi Shih)
445:
446: 2014-12-16 Nicolas J Brouard <nbrouard@tugault.local>
447:
448: * imach.c (Module): Merging 1.61 to 1.162
449:
450: 2014-09-02 Nicolas J Brouard <nbrouard@njbrouard.ined.fr>
451:
452: * prevlim.h (Module):
453:
1.34 brouard 454: 2014-01-26 Nicolas J Brouard <nbrouard@ledermann-2.local>
455:
456: * imach.c (Module): Trying to merge old staffs together while being at Tokyo. Not tested...
457: (Module): Version 0.98nR Running ok, but output format still only works for three covariates.
458:
1.33 brouard 459: 2010-04-29 brouard <brouard@ined.fr>
460:
461: * imach.c (Module): Checking covariates for more complex models
462: than V1+V2. A lot of change to be done. Unstable.
463:
464: 2010-04-26 brouard <brouard@ined.fr>
465:
466: * imach.c (Module): merging some libgsl code. Fixing computation
467: of likelione (using inter/intrapolation if mle = 0) in order to
468: get same likelihood as if mle=1.
469: Some cleaning of code and comments added.
470:
1.32 brouard 471: 2009-10-29 brouard <brouard@ined.fr>
472:
473: * imach.c (Module): Now imach stops if date of birth, at least year of birth, is not given. Some cleaning of the code.
474:
1.31 brouard 475: 2006-06-30 Brouard Nicolas <brouard@localhost>
476:
477: * imach.c (Module): Clarifications on computing e.j
478:
1.30 brouard 479: 2006-04-28 Brouard Nicolas <brouard@localhost>
480:
481: * imach.c (Module): Yes the sum of survivors was wrong since
482: imach-114 because nhstepm was no more computed in the age
483: loop. Now we define nhstepma in the age loop.
1.31 brouard 484: (Module): In order to speed up (in case of numerous covariates) we
485: compute health expectancies (without variances) in a first step
486: and then all the health expectancies with variances or standard
487: deviation (needs data from the Hessian matrices) which slows the
488: computation.
489: In the future we should be able to stop the program is only health
490: expectancies and graph are needed without standard deviations.
1.30 brouard 491:
1.29 lievre 492: 2006-04-04 LIEVRE Agnes <lievre@PC_00697.ined.fr>
493:
494: * imach.iss (Module):
495:
496: * imach.c (Module): bugs in evsi + population file added in htm output file
497:
498: 2006-03-22 LIEVRE Agnes <lievre@PC_00697.ined.fr>
499:
500: * imach.c (Module):
501:
1.27 brouard 502: 2006-03-20 Brouard Nicolas <brouard@localhost>
503:
1.28 brouard 504: * imach.c (Module): <title> changed, corresponds to .htm file
505: name. <head> headers where missing.
506:
1.27 brouard 507: * Makefile (Module): 0.98g
508:
509: * imach.c (Module): Weights can have a decimal point as for
510: English (a comma might work with a correct LC_NUMERIC environment,
511: otherwise the weight is truncated).
512: Modification of warning when the covariates values are not 0 or
513: 1.
514: Version 0.98g
515:
1.24 lievre 516: 2006-03-16 LIEVRE Agnes <lievre@PC_00697.ined.fr>
517:
1.26 lievre 518: * imach.c (Module): Comments concerning covariates added
519:
1.25 lievre 520: * noreg-setup.iss (Module): Version 0.98f
521:
1.24 lievre 522: * Makefile (Module): Version 0.98f make _windows=1 imachcyg-setup
523:
524: * imach.c (Module): refinements in the computation of lli if
525: status=-2 in order to have more reliable computation if stepm is
526: not 1 month. Version 0.98f
527:
1.22 brouard 528: 2006-03-15 Brouard Nicolas <brouard@localhost>
529:
530: * imach.c (Module): Bug if status = -2, the loglikelihood was
531: computed as likelihood omitting the logarithm. Version O.98e
532:
1.21 brouard 533: 2006-03-14 Brouard Nicolas <brouard@localhost>
534:
535: * imach.c (Module): varevsij Comments added explaining the second
536: table of variances if popbased=1 .
537: (Module): Covariances of eij, ekl added, graphs fixed, new html link.
538: (Module): Function pstamp added
539: (Module): Version 0.98d
540:
1.20 brouard 541: 2006-03-06 Brouard Nicolas <brouard@localhost>
542:
543: * imach.c (Module): Variance-covariance wrong links and
544: varian-covariance of ej. is needed (Saito).
545:
1.19 brouard 546: 2006-02-27 Brouard Nicolas <brouard@localhost>
547:
548: * imach.c (Module): One freematrix added in mlikeli!
549:
550: 2006-02-26 Brouard Nicolas <brouard@localhost>
551:
552: * imach.c (Module): Some improvements in processing parameter
553: filename with strsep.
554:
555: 2006-02-24 Brouard Nicolas <brouard@localhost>
556:
557: * imach.c (Module): Memory leaks checks with valgrind and:
558: datafile was not closed, some imatrix were not freed and on matrix
559: allocation too.
560:
1.16 lievre 561: 2006-02-09 LIEVRE Agnes <lievre@PC_00697.ined.fr>
562:
1.18 lievre 563: * strsep.c (Module): Inclusion because not in mingw32!!!
564:
1.17 lievre 565: * setup.iss.in (Module): IMACHSETUPVERSION added
566:
567: * noreg-setup.iss (Module): added to cvs tree
568:
1.16 lievre 569: * Makefile (Module): IMACHSETUPVERSION added
570:
1.15 brouard 571: 2006-01-30 BROUARD Nicolas <brouard@localhost>
572:
1.23 brouard 573: * Makefile (Module, Module): Latest Makefile
574:
1.15 brouard 575: * imach.c (Module): Back to gnuplot.exe instead of wgnuplot.exe
576:
577: 2006-01-27 BROUARD Nicolas <brouard@localhost>
578:
579: * noreg-setup.iss (Module): ADDED
580:
581: 2006-01-24 BROUARD Nicolas <brouard@localhost>
582:
583: * imach.c (Module): Comments (lines starting with a #) are allowed in data.
584:
1.14 brouard 585: 2005-10-25 Nicolas Brouard <brouard@dhcp171.recherche.ined.fr>
586:
587: * Makefile (Module): Added Imach98.pmsp and howto crete a dmg
588:
589: * createdmg.sh (Module): Creates a dmg disk for MaC OS/X
590:
1.12 lievre 591: 2005-09-30 <lievre@PC_00595>
592:
593: * imach.c (Module): sump fixed, loop imx fixed, and simplifications.
1.13 lievre 594: (Module): If the status is missing at the last wave but we know
595: that the person is alive, then we can code his/her status as -2
596: (instead of missing=-1 in earlier versions) and his/her
597: contributions to the likelihood is 1 - Prob of dying from last
598: health status (= 1-p13= p11+p12 in the easiest case of somebody in
599: the healthy state at last known wave). Version is 0.98
1.12 lievre 600:
1.11 brouard 601: 2004-05-20 Brouard Nicolas <brouard@localhost>
602:
603: * imach.c (Repository):
604: Agnes added a direct estimation of mortality (without the need of
605: computing period prevalence and differential mortality). Thus here
606: is version 0.97a which has been distributed to some people at
607: REVES 16 in Brugge using an Inno setup.exe for PCs. Estimates of
608: mortality using covariates is not done today. Estimating direct
609: mortality is a very different process because it doesn't need
610: interpolation because it is easy to get the lx from the force of
611: the mortality mux in the simplest case as for a Gompertz (log mux
612: = a + b*x . But we have been able to incorporate the new code
613: within former imach program (0.96d) without deteriorating too much
614: the understanding of the program.
615:
1.10 brouard 616: 2003-06-25 <brouard@BROUARD>
617:
618: * imach.c (Module): On windows (cygwin) function asctime_r doesn't
619: exist so I changed back to asctime which exists.
620: (Module): Version 0.96b
621:
622: 2003-06-24 <brouard@BROUARD>
623:
624: * imach.c (Module): Some bugs corrected for windows. Also, when
625: mle=-1 a template is output in file "or"mypar.txt with the design
626: of the covariance matrix to be input.
627:
1.9 brouard 628: 2003-06-25 Brouard Nicolas <brouard@homebrou>
629:
630: * imach.c (Repository): Duplicated warning errors corrected.
631: (Repository): Elapsed time after each iteration is now output. It
632: helps to forecast when convergence will be reached. Elapsed time
633: is stamped in powell. We created a new html file for the graphs
634: concerning matrix of covariance. It has extension -cov.htm.
635:
1.8 brouard 636: 2003-06-23 Brouard Nicolas <brouard@homebrou>
637:
638: * imach.c (Repository): Create a sub-directory where all the secondary files are. Only imach, htm, gp and r(imach) are on the main directory. Correct time and other things.
639:
640: 2003-06-18 Brouard Nicolas <brouard@homebrou>
641:
642: * imach.c (Repository): Suppress abusive calls to append to file html (solution was to put fichtm as a global variable. Version 0.96
643:
1.7 brouard 644: 2003-06-17 Brouard Nicolas <brouard@homebrou>
645:
646:
647: * imach.c (Repository): Check when date of death was earlier that
648: current date of interview. It may happen when the death was just
649: prior to the death. In this case, dh was negative and likelihood
650: was wrong (infinity). We still send an "Error" but patch by
651: assuming that the date of death was just one stepm after the
652: interview.
653: (Repository): Because some people have very long ID (first column)
654: we changed int to long in num[] and we added a new lvector for
655: memory allocation. But we also truncated to 8 characters (left
656: truncation)
657:
658: (Repository): No more line truncation errors.
659:
660: 2003-06-14 Brouard Nicolas <brouard@homebrou>
661:
662: * imach.c (Repository): Add of a routine likelione (likelihood
663: only once) which prints on a text file
664: (ilk) the contributions to the likelihood for each
665: individual/wave.
666:
667: 2003-06-13 Brouard Nicolas <brouard@homebrou>
668: * imach.c (Repository): Replace "freqsummary" at a correct
669: place. It differs from routine "prevalence" which may be called
670: many times. Probs is memory consuming and must be used with
671: parcimony.
672:
673: 2003-06-17 <brouard@BROUARD>
674:
675: * timeval.h (Module): Added included file to make use of
676: gettimeofday working on win32 with cygwin.
677:
678: 2003-05-16 Brouard Nicolas <brouard@brouard>
679: * imach.c (Module): Insert of a warning if the delay between two
680: waves is negative.
681:
682: * imach.c (Module):
683:
684: 2003-05-03 <brouard@BROUARD>
685:
686: * imach.c: Some cleaning
687:
688: 2003-03-28 <brouard@BROUARD>
689: * imach.c (Module): In version up to 0.92 likelihood was computed
690: as if date of death was unknown. Death was treated as any other
691: health state: the date of the interview describes the actual state
692: and not the date of a change in health state. The former idea was
693: to consider that at each interview the state was recorded
694: (healthy, disable or death) and IMaCh was corrected; but when we
695: introduced the exact date of death then we should have modified
696: the contribution of an exact death to the likelihood. This new
697: contribution is smaller and very dependent of the step unit
698: stepm. It is no more the probability to die between last interview
699: and month of death but the probability to survive from last
700: interview up to one month before death multiplied by the
701: probability to die within a month. Thanks to Chris
702: Jackson for correcting this bug. Former versions increased
703: mortality artificially. The bad side is that we add another loop
704:
705:
706: which slows down the processing. The difference can be up to 10%
707:
708:
709: lower mortality.
710:
711:
712:
713:
714:
715: 2002-05-30 <brouard@BROUARD>
716:
717:
718:
719:
720:
721: *
722:
723:
724:
725:
726:
727: * imach.c (Module): Add correlation matrix of one-step
728:
729:
730: probabilities and covariance matrix
731:
732:
733:
734:
735:
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