Annotation of imach/src/ChangeLog, revision 1.42
1.42 ! brouard 1: 2021-02-12 Nicolas Brouard <brouard@ined.fr>
! 2:
! 3: * imach.c (Module): The use of a Windows BOM (huge) file is now an error
! 4:
! 5:
! 6: 2021-02-11 Nicolas Brouard <brouard@ined.fr>
1.41 brouard 7:
8: * (Module): imach.c Someone entered 'results:' instead of 'result:'. Now it is an error which is printed.
9:
1.42 ! brouard 10: 2020-02-22 Brouard Nicolas <brouard@ined.fr>
1.40 brouard 11:
12: * (Module): imach.c Update mle=-3 (for computing Life expectancy
13: and life table from the data without any state)
14:
1.42 ! brouard 15: 2019-05-20 Brouard Nicolas <brouard@ined.fr>
1.39 brouard 16:
17: * version.h: Summary: version 0.99.r19
18:
19: * imach.c: Summary: Projection syntax simplified
20: We can now start projections, forward or backward, from the mean date
21: of inteviews up to or down to a number of years of projection:
22: prevforecast=1 yearsfproj=15.3 mobil_average=0
23: or
24: prevforecast=1 starting-proj-date=1/1/2007 final-proj-date=12/31/2017 mobil_average=0
25: or
26: prevbackcast=1 yearsbproj=12.3 mobil_average=1
27: or
28: prevbackcast=1 starting-back-date=1/10/1999 final-back-date=1/1/1985 mobil_average=1
29:
1.42 ! brouard 30: 2019-05-18 Brouard Nicolas <brouard@ined.fr>
1.39 brouard 31:
32: * imach.c: Summary: doxygen tex bug
33:
1.42 ! brouard 34: 2019-05-16 Brouard Nicolas <brouard@ined.fr>
1.39 brouard 35:
36: * imach.c: Summary: There was some wrong lines added
37:
1.42 ! brouard 38: 2019-05-09 Brouard Nicolas <brouard@ined.fr>
1.39 brouard 39:
40: * Makefile, imach.c: *** empty log message ***
41:
42: * ChangeLog: Summary: C=
43:
44: * imach.c: Summary: Some updates
45:
46: * imach.c: Summary: Before ncovmax
47:
48: * version.h: *** empty log message ***
49:
50: * imach.c: Summary: 0.99r18 unlimited number of individuals
51: The number n which was limited to 20,000 cases is now unlimited, from firstobs to lastobs. If the number is too for the virtual memory, probably an error will occur.
52:
1.42 ! brouard 53: 2018-12-13 Brouard Nicolas <brouard@ined.fr>
1.39 brouard 54:
55: * imach.c: Summary: Bug for young ages (<-30) will be in r17
56:
1.42 ! brouard 57: 2018-12-05 Brouard Nicolas <brouard@ined.fr>
1.39 brouard 58:
59: * Makefile: Summary: 0.99r16
60:
1.42 ! brouard 61: 2018-05-02 Brouard Nicolas <brouard@ined.fr>
1.39 brouard 62:
63: * imach.c: Summary: Some bugs fixed
64:
1.42 ! brouard 65: 2018-05-02 Brouard Nicolas <brouard@ined.fr>
1.39 brouard 66:
67: * imach.c: Summary: Bug for young ages (<-30) will be in r17
68:
1.42 ! brouard 69: 2018-05-02 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 70:
71: * imach.c: Summary: Some bugs fixed
72:
1.42 ! brouard 73: 2018-05-01 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 74:
75: * imach.c:
76: Summary: Bug fixed by providing frequencies only for non missing covariates
77:
1.42 ! brouard 78: 2018-04-27 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 79:
80: * imach.c: Summary: some minor bugs
81:
1.42 ! brouard 82: 2018-04-21 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 83:
84: * README.txt: *** empty log message ***
85:
86: * imach.c: Summary: Some bugs fixed, valgrind tested
87:
1.42 ! brouard 88: 2018-04-20 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 89:
90: * Makefile, README.txt, setup.iss: Summary: imach 0.99r16
91:
92: * imach.c:
93: Summary: Computing mean and stdeviation of fixed quantitative variables
94:
1.42 ! brouard 95: 2018-04-19 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 96:
97: * imach.c: Summary: Some minor bugs fixed
98:
99: * version.h: *** empty log message ***
100:
1.42 ! brouard 101: 2018-02-27 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 102:
103: * imach.c: *** empty log message ***
104:
105: * imach.c: Summary: Adding second argument for quitting
106:
1.42 ! brouard 107: 2018-02-21 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 108:
109: * Makefile, README.txt, imach.c: Summary: 0.99r15
110: New Makefile with recent VirtualBox 5.26. Bug in sqrt negatve in imach.c
111:
1.42 ! brouard 112: 2017-07-20 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 113:
114: * imach.c: Summary: temporary working
115:
1.42 ! brouard 116: 2017-07-19 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 117:
118: * imach.c: Summary: Bug for mobil_average=0 and prevforecast fixed(?)
119:
1.42 ! brouard 120: 2017-07-17 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 121:
122: * imach.c: Summary: BOM files can be read now
123:
1.42 ! brouard 124: 2017-06-30 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 125:
126: * imach.c: Summary: Graphs improvements
127:
128: * imach.c: Summary: Saito's color
129:
1.42 ! brouard 130: 2017-06-29 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 131:
132: * imach.c: Summary: Version 0.99r14
133:
1.42 ! brouard 134: 2017-06-27 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 135:
136: * imach.c: Summary: More documentation on projections
137:
138: * imach.c: Summary: Color of backprojection changed from 6 to 5(yellow)
139:
140: * imach.c: Summary: Some bug with rint
141:
1.42 ! brouard 142: 2017-05-24 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 143:
144: * imach.c: *** empty log message ***
145:
1.42 ! brouard 146: 2017-05-23 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 147:
148: * imach.c: Summary: Code into subroutine, cleanings
149:
1.42 ! brouard 150: 2017-05-18 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 151:
152: * imach.c:
153: Summary: backprojection and confidence intervals of backprevalence
154:
1.42 ! brouard 155: 2017-05-13 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 156:
157: * imach.c: Summary: temporary save for backprojection
158:
159: * imach.c: Summary: Version 0.99r13 (improvements and bugs fixed)
160:
1.42 ! brouard 161: 2017-04-26 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 162:
163: * imach.c: Summary: imach 0.99r13 Some bugs fixed
164:
165: * imach.c: Summary: Labels in graphs
166:
1.42 ! brouard 167: 2017-04-24 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 168:
169: * imach.c: Summary: to save
170:
1.42 ! brouard 171: 2017-04-18 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 172:
173: * imach.c: *** empty log message ***
174:
1.42 ! brouard 175: 2017-04-05 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 176:
177: * imach.c: Summary: Bug in E_ as well as in T_ fixed nres-1 vs k1-1
178:
1.42 ! brouard 179: 2017-04-04 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 180:
181: * imach.c: Summary: Gnuplot indexations fixed (humm)
182:
183: * imach.c:
184: Summary: Some errors to warnings only if date of death is unknown but status is death we could set to pi3
185:
1.42 ! brouard 186: 2017-04-03 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 187:
188: * imach.c: Summary: Version 0.99r12
189: Some cleanings, conformed with updated documentation.
190:
1.42 ! brouard 191: 2017-03-30 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 192:
193: * version.h: *** empty log message ***
194:
195: * version.h: Summary:0.99r11
196:
1.42 ! brouard 197: 2017-03-29 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 198:
199: * imach.c: Summary: Temp
200:
1.42 ! brouard 201: 2017-03-27 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 202:
203: * imach.c: Summary: Temporary
204:
1.42 ! brouard 205: 2017-03-08 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 206:
207: * imach.c: Summary: IMaCh version 0.99r10 bugs in gnuplot fixed
208:
209: * imach.c: Summary: Fixing data parameter line
210:
1.42 ! brouard 211: 2016-12-15 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 212:
213: * imach.c: Summary: 0.99 in progress
214:
1.42 ! brouard 215: 2016-09-15 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 216:
217: * imach.c: *** empty log message ***
218:
219: * imach.c: Summary: not working
220:
1.42 ! brouard 221: 2016-09-08 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 222:
223: * imach.c: Summary: continue
224:
1.42 ! brouard 225: 2016-09-07 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 226:
227: * imach.c: Summary: Starting values from frequencies
228:
229: * imach.c: *** empty log message ***
230:
1.42 ! brouard 231: 2016-09-02 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 232:
233: * imach.c: *** empty log message ***
234:
1.42 ! brouard 235: 2016-08-30 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 236:
237: * imach.c: Summary: Fixing a lots
238:
1.42 ! brouard 239: 2016-08-29 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 240:
241: * imach.c: Summary: gnuplot problem in Back projection to fix
242:
243: * imach.c: Summary: Better
244:
1.42 ! brouard 245: 2016-08-26 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 246:
247: * imach.c:
248: Summary: Improvement in Powell output in order to copy and paste
249:
250: * imach.c: Summary: Starting tests of 0.99
251:
252: * imach.c: Summary: to valgrind
253:
1.42 ! brouard 254: 2016-08-25 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 255:
256: * imach.c: *** empty log message ***
257:
1.42 ! brouard 258: 2016-08-23 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 259:
260: * imach.c: *** empty log message ***
261:
262: * imach.c: Summary: not working
263:
1.42 ! brouard 264: 2016-08-22 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 265:
266: * imach.c: Summary: not working
267:
268: * imach.c: Summary: Not working
269:
1.42 ! brouard 270: 2016-07-23 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 271:
272: * imach.c: Summary: Completing for func too
273:
1.42 ! brouard 274: 2016-07-22 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 275:
276: * imach.c: Summary: Fixing some arrays, still debugging
277:
1.42 ! brouard 278: 2016-07-21 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 279:
280: * imach.c:
281: Summary: 0.99 working (more or less) for Asian Workshop on multitate methods
282:
1.42 ! brouard 283: 2016-07-12 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 284:
285: * imach.c: Summary: temp
286:
287: * imach.c: Summary: saving but not running
288:
1.42 ! brouard 289: 2016-07-01 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 290:
291: * imach.c: Summary: Fixes
292:
1.42 ! brouard 293: 2016-02-19 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 294:
295: * imach-0.98r.c: Summary: Kind of 0.98r? series, starting with r7
296:
297: * setup.iss, Makefile, version.h: *** empty log message ***
298:
299: * imach.c: Summary: temporary
300:
1.42 ! brouard 301: 2016-02-17 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 302:
303: * imach.c: Summary: Probably last 0.98 stable version 0.98r6
304:
1.42 ! brouard 305: 2016-02-16 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 306:
307: * imach.c: Summary: minor bug
308:
309: * imach.c: Summary: 0.99r2
310:
1.42 ! brouard 311: 2016-02-15 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 312:
313: * imach.c: *** empty log message ***
314:
1.42 ! brouard 315: 2016-02-12 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 316:
317: * imach.c: Summary: 0.99 Back projections
318:
1.42 ! brouard 319: 2015-12-23 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 320:
321: * imach.c: Summary: Experimental backcast
322:
1.42 ! brouard 323: 2015-12-18 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 324:
325: * imach.c: Summary: 0.98r4 Warning and status=-2
326:
327: Version 0.98r4 is now:
328: - displaying an error when status is -1, date of interview unknown and date of death known;
329: - permitting a status -2 when the vital status is unknown at a known date of right truncation.
330: Older changes concerning s=-2, dating from 2005 have been supersed.
331:
332: * Makefile: *** empty log message ***
333:
1.42 ! brouard 334: 2015-12-16 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 335:
336: * Makefile: *** empty log message ***
337:
338: * imach.c: Summary: 0.98r4 working
339:
340: * Makefile: Summary: linuxrpm added
341:
342: * Makefile: *** empty log message ***
343:
344: * imach.c: Summary: temporary not working
345:
1.42 ! brouard 346: 2015-12-11 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 347:
348: * imach.c: Summary: 0.98r4
349:
1.42 ! brouard 350: 2015-12-08 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 351:
352: * Makefile: *** empty log message ***
353:
1.42 ! brouard 354: 2015-11-21 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 355:
356: * Makefile:
357: Summary: VBoxManage change from execute --image to run --exe and --wait-exit doesn't exist any more
358:
359: * imach.c: Summary: minor typo
360:
361: * imach.c: Summary: 0.98r3 with some graph of projected cross-sectional
362:
363: Author: Nicolas Brouard
364:
1.42 ! brouard 365: 2015-11-18 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 366:
367: * imach.c: Summary: Start working on projected prevalences
368:
1.42 ! brouard 369: 2015-11-17 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 370:
371: * imach.c: Summary: Adding ftolpl parameter
372: Author: N Brouard
373:
374: We had difficulties to get smoothed confidence intervals. It was due
375: to the period prevalence which wasn't computed accurately. The inner
376: parameter ftolpl is now an outer parameter of the .imach parameter
377: file after estepm. If ftolpl is small 1.e-4 and estepm too,
378: computation are long.
379:
380: * version.h: *** empty log message ***
381:
382: * imach.c: Summary: temporary
383:
1.42 ! brouard 384: 2015-10-27 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 385:
386: * Makefile: *** empty log message ***
387:
388: * setup.iss.in: Summary: some new subdirs
389:
390: * imach.c: *** empty log message ***
391:
392: * setup.iss.in:
393: Summary: Adding gnuplot 5.1 with bin and etc for pango fonts
394:
1.42 ! brouard 395: 2015-10-24 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 396:
397: * imach.c: *** empty log message ***
398:
1.42 ! brouard 399: 2015-10-23 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 400:
401: * imach.c:
402: Summary: 0.98r3 some clarification for graphs on likelihood contributions
403:
1.42 ! brouard 404: 2015-10-01 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 405:
406: * imach.c: Summary: Some new graphs of contribution to likelihood
407:
1.42 ! brouard 408: 2015-09-30 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 409:
410: * Makefile:
411: Summary: Version read from version.h, itself read with cmake
412:
413: * imach.c: Summary: looking at better estimation of the hessian
414:
415: Also a better criteria for convergence to the period prevalence And
416: therefore adding the number of years needed to converge. (The
417: prevalence in any alive state shold sum to one
418:
419: * Makefile: *** empty log message ***
420:
1.42 ! brouard 421: 2015-09-22 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 422:
423: * imach.c:
424: Summary: Adding some overall graph on contribution to likelihood. Might change
425:
1.42 ! brouard 426: 2015-09-15 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 427:
428: * Makefile: *** empty log message ***
429:
430: * imach.c: Summary: 0.98r0
431:
432: - Some new graphs like suvival functions
433: - Some bugs fixed like model=1+age+V2.
434:
435: * ChangeLog, Makefile: Summary: 0.98r0
436:
437: * CMakeLists.txt: Summary: Some tests for setup.iss
438:
1.37 brouard 439: 2015-09-15 Nicolas J Brouard <nbrouard@tugault.ined.fr>
440:
441: * (Module): 0.98r0 Some new graphs, some bugs fixed: model=1+age+V2. etc
442:
1.36 brouard 443: 2015-08-18 Nicolas J Brouard <nbrouard@tugault.local>
444:
445: * (Module): Adding error when the covariance matrix doesn't contain the exact number of lines required by the model line.
446:
1.35 brouard 447: 2015-08-03 Nicolas J Brouard <nbrouard@tugault.ined.fr>
448:
449: * (Module): Changing Variance of one-step probabilities into Standard deviation (thanks to Yao-Chi Shih)
450:
451: 2014-12-16 Nicolas J Brouard <nbrouard@tugault.local>
452:
453: * imach.c (Module): Merging 1.61 to 1.162
454:
455: 2014-09-02 Nicolas J Brouard <nbrouard@njbrouard.ined.fr>
456:
457: * prevlim.h (Module):
458:
1.34 brouard 459: 2014-01-26 Nicolas J Brouard <nbrouard@ledermann-2.local>
460:
461: * imach.c (Module): Trying to merge old staffs together while being at Tokyo. Not tested...
462: (Module): Version 0.98nR Running ok, but output format still only works for three covariates.
463:
1.33 brouard 464: 2010-04-29 brouard <brouard@ined.fr>
465:
466: * imach.c (Module): Checking covariates for more complex models
467: than V1+V2. A lot of change to be done. Unstable.
468:
469: 2010-04-26 brouard <brouard@ined.fr>
470:
471: * imach.c (Module): merging some libgsl code. Fixing computation
472: of likelione (using inter/intrapolation if mle = 0) in order to
473: get same likelihood as if mle=1.
474: Some cleaning of code and comments added.
475:
1.32 brouard 476: 2009-10-29 brouard <brouard@ined.fr>
477:
478: * imach.c (Module): Now imach stops if date of birth, at least year of birth, is not given. Some cleaning of the code.
479:
1.31 brouard 480: 2006-06-30 Brouard Nicolas <brouard@localhost>
481:
482: * imach.c (Module): Clarifications on computing e.j
483:
1.30 brouard 484: 2006-04-28 Brouard Nicolas <brouard@localhost>
485:
486: * imach.c (Module): Yes the sum of survivors was wrong since
487: imach-114 because nhstepm was no more computed in the age
488: loop. Now we define nhstepma in the age loop.
1.31 brouard 489: (Module): In order to speed up (in case of numerous covariates) we
490: compute health expectancies (without variances) in a first step
491: and then all the health expectancies with variances or standard
492: deviation (needs data from the Hessian matrices) which slows the
493: computation.
494: In the future we should be able to stop the program is only health
495: expectancies and graph are needed without standard deviations.
1.30 brouard 496:
1.29 lievre 497: 2006-04-04 LIEVRE Agnes <lievre@PC_00697.ined.fr>
498:
499: * imach.iss (Module):
500:
501: * imach.c (Module): bugs in evsi + population file added in htm output file
502:
503: 2006-03-22 LIEVRE Agnes <lievre@PC_00697.ined.fr>
504:
505: * imach.c (Module):
506:
1.27 brouard 507: 2006-03-20 Brouard Nicolas <brouard@localhost>
508:
1.28 brouard 509: * imach.c (Module): <title> changed, corresponds to .htm file
510: name. <head> headers where missing.
511:
1.27 brouard 512: * Makefile (Module): 0.98g
513:
514: * imach.c (Module): Weights can have a decimal point as for
515: English (a comma might work with a correct LC_NUMERIC environment,
516: otherwise the weight is truncated).
517: Modification of warning when the covariates values are not 0 or
518: 1.
519: Version 0.98g
520:
1.24 lievre 521: 2006-03-16 LIEVRE Agnes <lievre@PC_00697.ined.fr>
522:
1.26 lievre 523: * imach.c (Module): Comments concerning covariates added
524:
1.25 lievre 525: * noreg-setup.iss (Module): Version 0.98f
526:
1.24 lievre 527: * Makefile (Module): Version 0.98f make _windows=1 imachcyg-setup
528:
529: * imach.c (Module): refinements in the computation of lli if
530: status=-2 in order to have more reliable computation if stepm is
531: not 1 month. Version 0.98f
532:
1.22 brouard 533: 2006-03-15 Brouard Nicolas <brouard@localhost>
534:
535: * imach.c (Module): Bug if status = -2, the loglikelihood was
536: computed as likelihood omitting the logarithm. Version O.98e
537:
1.21 brouard 538: 2006-03-14 Brouard Nicolas <brouard@localhost>
539:
540: * imach.c (Module): varevsij Comments added explaining the second
541: table of variances if popbased=1 .
542: (Module): Covariances of eij, ekl added, graphs fixed, new html link.
543: (Module): Function pstamp added
544: (Module): Version 0.98d
545:
1.20 brouard 546: 2006-03-06 Brouard Nicolas <brouard@localhost>
547:
548: * imach.c (Module): Variance-covariance wrong links and
549: varian-covariance of ej. is needed (Saito).
550:
1.19 brouard 551: 2006-02-27 Brouard Nicolas <brouard@localhost>
552:
553: * imach.c (Module): One freematrix added in mlikeli!
554:
555: 2006-02-26 Brouard Nicolas <brouard@localhost>
556:
557: * imach.c (Module): Some improvements in processing parameter
558: filename with strsep.
559:
560: 2006-02-24 Brouard Nicolas <brouard@localhost>
561:
562: * imach.c (Module): Memory leaks checks with valgrind and:
563: datafile was not closed, some imatrix were not freed and on matrix
564: allocation too.
565:
1.16 lievre 566: 2006-02-09 LIEVRE Agnes <lievre@PC_00697.ined.fr>
567:
1.18 lievre 568: * strsep.c (Module): Inclusion because not in mingw32!!!
569:
1.17 lievre 570: * setup.iss.in (Module): IMACHSETUPVERSION added
571:
572: * noreg-setup.iss (Module): added to cvs tree
573:
1.16 lievre 574: * Makefile (Module): IMACHSETUPVERSION added
575:
1.15 brouard 576: 2006-01-30 BROUARD Nicolas <brouard@localhost>
577:
1.23 brouard 578: * Makefile (Module, Module): Latest Makefile
579:
1.15 brouard 580: * imach.c (Module): Back to gnuplot.exe instead of wgnuplot.exe
581:
582: 2006-01-27 BROUARD Nicolas <brouard@localhost>
583:
584: * noreg-setup.iss (Module): ADDED
585:
586: 2006-01-24 BROUARD Nicolas <brouard@localhost>
587:
588: * imach.c (Module): Comments (lines starting with a #) are allowed in data.
589:
1.14 brouard 590: 2005-10-25 Nicolas Brouard <brouard@dhcp171.recherche.ined.fr>
591:
592: * Makefile (Module): Added Imach98.pmsp and howto crete a dmg
593:
594: * createdmg.sh (Module): Creates a dmg disk for MaC OS/X
595:
1.12 lievre 596: 2005-09-30 <lievre@PC_00595>
597:
598: * imach.c (Module): sump fixed, loop imx fixed, and simplifications.
1.13 lievre 599: (Module): If the status is missing at the last wave but we know
600: that the person is alive, then we can code his/her status as -2
601: (instead of missing=-1 in earlier versions) and his/her
602: contributions to the likelihood is 1 - Prob of dying from last
603: health status (= 1-p13= p11+p12 in the easiest case of somebody in
604: the healthy state at last known wave). Version is 0.98
1.12 lievre 605:
1.11 brouard 606: 2004-05-20 Brouard Nicolas <brouard@localhost>
607:
608: * imach.c (Repository):
609: Agnes added a direct estimation of mortality (without the need of
610: computing period prevalence and differential mortality). Thus here
611: is version 0.97a which has been distributed to some people at
612: REVES 16 in Brugge using an Inno setup.exe for PCs. Estimates of
613: mortality using covariates is not done today. Estimating direct
614: mortality is a very different process because it doesn't need
615: interpolation because it is easy to get the lx from the force of
616: the mortality mux in the simplest case as for a Gompertz (log mux
617: = a + b*x . But we have been able to incorporate the new code
618: within former imach program (0.96d) without deteriorating too much
619: the understanding of the program.
620:
1.10 brouard 621: 2003-06-25 <brouard@BROUARD>
622:
623: * imach.c (Module): On windows (cygwin) function asctime_r doesn't
624: exist so I changed back to asctime which exists.
625: (Module): Version 0.96b
626:
627: 2003-06-24 <brouard@BROUARD>
628:
629: * imach.c (Module): Some bugs corrected for windows. Also, when
630: mle=-1 a template is output in file "or"mypar.txt with the design
631: of the covariance matrix to be input.
632:
1.9 brouard 633: 2003-06-25 Brouard Nicolas <brouard@homebrou>
634:
635: * imach.c (Repository): Duplicated warning errors corrected.
636: (Repository): Elapsed time after each iteration is now output. It
637: helps to forecast when convergence will be reached. Elapsed time
638: is stamped in powell. We created a new html file for the graphs
639: concerning matrix of covariance. It has extension -cov.htm.
640:
1.8 brouard 641: 2003-06-23 Brouard Nicolas <brouard@homebrou>
642:
643: * imach.c (Repository): Create a sub-directory where all the secondary files are. Only imach, htm, gp and r(imach) are on the main directory. Correct time and other things.
644:
645: 2003-06-18 Brouard Nicolas <brouard@homebrou>
646:
647: * imach.c (Repository): Suppress abusive calls to append to file html (solution was to put fichtm as a global variable. Version 0.96
648:
1.7 brouard 649: 2003-06-17 Brouard Nicolas <brouard@homebrou>
650:
651:
652: * imach.c (Repository): Check when date of death was earlier that
653: current date of interview. It may happen when the death was just
654: prior to the death. In this case, dh was negative and likelihood
655: was wrong (infinity). We still send an "Error" but patch by
656: assuming that the date of death was just one stepm after the
657: interview.
658: (Repository): Because some people have very long ID (first column)
659: we changed int to long in num[] and we added a new lvector for
660: memory allocation. But we also truncated to 8 characters (left
661: truncation)
662:
663: (Repository): No more line truncation errors.
664:
665: 2003-06-14 Brouard Nicolas <brouard@homebrou>
666:
667: * imach.c (Repository): Add of a routine likelione (likelihood
668: only once) which prints on a text file
669: (ilk) the contributions to the likelihood for each
670: individual/wave.
671:
672: 2003-06-13 Brouard Nicolas <brouard@homebrou>
673: * imach.c (Repository): Replace "freqsummary" at a correct
674: place. It differs from routine "prevalence" which may be called
675: many times. Probs is memory consuming and must be used with
676: parcimony.
677:
678: 2003-06-17 <brouard@BROUARD>
679:
680: * timeval.h (Module): Added included file to make use of
681: gettimeofday working on win32 with cygwin.
682:
683: 2003-05-16 Brouard Nicolas <brouard@brouard>
684: * imach.c (Module): Insert of a warning if the delay between two
685: waves is negative.
686:
687: * imach.c (Module):
688:
689: 2003-05-03 <brouard@BROUARD>
690:
691: * imach.c: Some cleaning
692:
693: 2003-03-28 <brouard@BROUARD>
694: * imach.c (Module): In version up to 0.92 likelihood was computed
695: as if date of death was unknown. Death was treated as any other
696: health state: the date of the interview describes the actual state
697: and not the date of a change in health state. The former idea was
698: to consider that at each interview the state was recorded
699: (healthy, disable or death) and IMaCh was corrected; but when we
700: introduced the exact date of death then we should have modified
701: the contribution of an exact death to the likelihood. This new
702: contribution is smaller and very dependent of the step unit
703: stepm. It is no more the probability to die between last interview
704: and month of death but the probability to survive from last
705: interview up to one month before death multiplied by the
706: probability to die within a month. Thanks to Chris
707: Jackson for correcting this bug. Former versions increased
708: mortality artificially. The bad side is that we add another loop
709:
710:
711: which slows down the processing. The difference can be up to 10%
712:
713:
714: lower mortality.
715:
716:
717:
718:
719:
720: 2002-05-30 <brouard@BROUARD>
721:
722:
723:
724:
725:
726: *
727:
728:
729:
730:
731:
732: * imach.c (Module): Add correlation matrix of one-step
733:
734:
735: probabilities and covariance matrix
736:
737:
738:
739:
740:
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