Annotation of imach/src/ChangeLog, revision 1.43
1.43 ! brouard 1: 2021-02-20 Nicolas Brouard <brouard@ined.fr>
! 2:
! 3: * imach.c (Module): Fix bug on quitting after result lines!
! 4:
1.42 brouard 5: 2021-02-12 Nicolas Brouard <brouard@ined.fr>
6:
7: * imach.c (Module): The use of a Windows BOM (huge) file is now an error
8:
9:
10: 2021-02-11 Nicolas Brouard <brouard@ined.fr>
1.41 brouard 11:
12: * (Module): imach.c Someone entered 'results:' instead of 'result:'. Now it is an error which is printed.
13:
1.42 brouard 14: 2020-02-22 Brouard Nicolas <brouard@ined.fr>
1.40 brouard 15:
16: * (Module): imach.c Update mle=-3 (for computing Life expectancy
17: and life table from the data without any state)
18:
1.42 brouard 19: 2019-05-20 Brouard Nicolas <brouard@ined.fr>
1.39 brouard 20:
21: * version.h: Summary: version 0.99.r19
22:
23: * imach.c: Summary: Projection syntax simplified
24: We can now start projections, forward or backward, from the mean date
25: of inteviews up to or down to a number of years of projection:
26: prevforecast=1 yearsfproj=15.3 mobil_average=0
27: or
28: prevforecast=1 starting-proj-date=1/1/2007 final-proj-date=12/31/2017 mobil_average=0
29: or
30: prevbackcast=1 yearsbproj=12.3 mobil_average=1
31: or
32: prevbackcast=1 starting-back-date=1/10/1999 final-back-date=1/1/1985 mobil_average=1
33:
1.42 brouard 34: 2019-05-18 Brouard Nicolas <brouard@ined.fr>
1.39 brouard 35:
36: * imach.c: Summary: doxygen tex bug
37:
1.42 brouard 38: 2019-05-16 Brouard Nicolas <brouard@ined.fr>
1.39 brouard 39:
40: * imach.c: Summary: There was some wrong lines added
41:
1.42 brouard 42: 2019-05-09 Brouard Nicolas <brouard@ined.fr>
1.39 brouard 43:
44: * Makefile, imach.c: *** empty log message ***
45:
46: * ChangeLog: Summary: C=
47:
48: * imach.c: Summary: Some updates
49:
50: * imach.c: Summary: Before ncovmax
51:
52: * version.h: *** empty log message ***
53:
54: * imach.c: Summary: 0.99r18 unlimited number of individuals
55: The number n which was limited to 20,000 cases is now unlimited, from firstobs to lastobs. If the number is too for the virtual memory, probably an error will occur.
56:
1.42 brouard 57: 2018-12-13 Brouard Nicolas <brouard@ined.fr>
1.39 brouard 58:
59: * imach.c: Summary: Bug for young ages (<-30) will be in r17
60:
1.42 brouard 61: 2018-12-05 Brouard Nicolas <brouard@ined.fr>
1.39 brouard 62:
63: * Makefile: Summary: 0.99r16
64:
1.42 brouard 65: 2018-05-02 Brouard Nicolas <brouard@ined.fr>
1.39 brouard 66:
67: * imach.c: Summary: Some bugs fixed
68:
1.42 brouard 69: 2018-05-02 Brouard Nicolas <brouard@ined.fr>
1.39 brouard 70:
71: * imach.c: Summary: Bug for young ages (<-30) will be in r17
72:
1.42 brouard 73: 2018-05-02 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 74:
75: * imach.c: Summary: Some bugs fixed
76:
1.42 brouard 77: 2018-05-01 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 78:
79: * imach.c:
80: Summary: Bug fixed by providing frequencies only for non missing covariates
81:
1.42 brouard 82: 2018-04-27 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 83:
84: * imach.c: Summary: some minor bugs
85:
1.42 brouard 86: 2018-04-21 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 87:
88: * README.txt: *** empty log message ***
89:
90: * imach.c: Summary: Some bugs fixed, valgrind tested
91:
1.42 brouard 92: 2018-04-20 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 93:
94: * Makefile, README.txt, setup.iss: Summary: imach 0.99r16
95:
96: * imach.c:
97: Summary: Computing mean and stdeviation of fixed quantitative variables
98:
1.42 brouard 99: 2018-04-19 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 100:
101: * imach.c: Summary: Some minor bugs fixed
102:
103: * version.h: *** empty log message ***
104:
1.42 brouard 105: 2018-02-27 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 106:
107: * imach.c: *** empty log message ***
108:
109: * imach.c: Summary: Adding second argument for quitting
110:
1.42 brouard 111: 2018-02-21 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 112:
113: * Makefile, README.txt, imach.c: Summary: 0.99r15
114: New Makefile with recent VirtualBox 5.26. Bug in sqrt negatve in imach.c
115:
1.42 brouard 116: 2017-07-20 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 117:
118: * imach.c: Summary: temporary working
119:
1.42 brouard 120: 2017-07-19 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 121:
122: * imach.c: Summary: Bug for mobil_average=0 and prevforecast fixed(?)
123:
1.42 brouard 124: 2017-07-17 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 125:
126: * imach.c: Summary: BOM files can be read now
127:
1.42 brouard 128: 2017-06-30 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 129:
130: * imach.c: Summary: Graphs improvements
131:
132: * imach.c: Summary: Saito's color
133:
1.42 brouard 134: 2017-06-29 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 135:
136: * imach.c: Summary: Version 0.99r14
137:
1.42 brouard 138: 2017-06-27 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 139:
140: * imach.c: Summary: More documentation on projections
141:
142: * imach.c: Summary: Color of backprojection changed from 6 to 5(yellow)
143:
144: * imach.c: Summary: Some bug with rint
145:
1.42 brouard 146: 2017-05-24 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 147:
148: * imach.c: *** empty log message ***
149:
1.42 brouard 150: 2017-05-23 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 151:
152: * imach.c: Summary: Code into subroutine, cleanings
153:
1.42 brouard 154: 2017-05-18 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 155:
156: * imach.c:
157: Summary: backprojection and confidence intervals of backprevalence
158:
1.42 brouard 159: 2017-05-13 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 160:
161: * imach.c: Summary: temporary save for backprojection
162:
163: * imach.c: Summary: Version 0.99r13 (improvements and bugs fixed)
164:
1.42 brouard 165: 2017-04-26 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 166:
167: * imach.c: Summary: imach 0.99r13 Some bugs fixed
168:
169: * imach.c: Summary: Labels in graphs
170:
1.42 brouard 171: 2017-04-24 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 172:
173: * imach.c: Summary: to save
174:
1.42 brouard 175: 2017-04-18 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 176:
177: * imach.c: *** empty log message ***
178:
1.42 brouard 179: 2017-04-05 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 180:
181: * imach.c: Summary: Bug in E_ as well as in T_ fixed nres-1 vs k1-1
182:
1.42 brouard 183: 2017-04-04 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 184:
185: * imach.c: Summary: Gnuplot indexations fixed (humm)
186:
187: * imach.c:
188: Summary: Some errors to warnings only if date of death is unknown but status is death we could set to pi3
189:
1.42 brouard 190: 2017-04-03 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 191:
192: * imach.c: Summary: Version 0.99r12
193: Some cleanings, conformed with updated documentation.
194:
1.42 brouard 195: 2017-03-30 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 196:
197: * version.h: *** empty log message ***
198:
199: * version.h: Summary:0.99r11
200:
1.42 brouard 201: 2017-03-29 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 202:
203: * imach.c: Summary: Temp
204:
1.42 brouard 205: 2017-03-27 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 206:
207: * imach.c: Summary: Temporary
208:
1.42 brouard 209: 2017-03-08 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 210:
211: * imach.c: Summary: IMaCh version 0.99r10 bugs in gnuplot fixed
212:
213: * imach.c: Summary: Fixing data parameter line
214:
1.42 brouard 215: 2016-12-15 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 216:
217: * imach.c: Summary: 0.99 in progress
218:
1.42 brouard 219: 2016-09-15 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 220:
221: * imach.c: *** empty log message ***
222:
223: * imach.c: Summary: not working
224:
1.42 brouard 225: 2016-09-08 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 226:
227: * imach.c: Summary: continue
228:
1.42 brouard 229: 2016-09-07 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 230:
231: * imach.c: Summary: Starting values from frequencies
232:
233: * imach.c: *** empty log message ***
234:
1.42 brouard 235: 2016-09-02 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 236:
237: * imach.c: *** empty log message ***
238:
1.42 brouard 239: 2016-08-30 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 240:
241: * imach.c: Summary: Fixing a lots
242:
1.42 brouard 243: 2016-08-29 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 244:
245: * imach.c: Summary: gnuplot problem in Back projection to fix
246:
247: * imach.c: Summary: Better
248:
1.42 brouard 249: 2016-08-26 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 250:
251: * imach.c:
252: Summary: Improvement in Powell output in order to copy and paste
253:
254: * imach.c: Summary: Starting tests of 0.99
255:
256: * imach.c: Summary: to valgrind
257:
1.42 brouard 258: 2016-08-25 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 259:
260: * imach.c: *** empty log message ***
261:
1.42 brouard 262: 2016-08-23 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 263:
264: * imach.c: *** empty log message ***
265:
266: * imach.c: Summary: not working
267:
1.42 brouard 268: 2016-08-22 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 269:
270: * imach.c: Summary: not working
271:
272: * imach.c: Summary: Not working
273:
1.42 brouard 274: 2016-07-23 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 275:
276: * imach.c: Summary: Completing for func too
277:
1.42 brouard 278: 2016-07-22 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 279:
280: * imach.c: Summary: Fixing some arrays, still debugging
281:
1.42 brouard 282: 2016-07-21 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 283:
284: * imach.c:
285: Summary: 0.99 working (more or less) for Asian Workshop on multitate methods
286:
1.42 brouard 287: 2016-07-12 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 288:
289: * imach.c: Summary: temp
290:
291: * imach.c: Summary: saving but not running
292:
1.42 brouard 293: 2016-07-01 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 294:
295: * imach.c: Summary: Fixes
296:
1.42 brouard 297: 2016-02-19 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 298:
299: * imach-0.98r.c: Summary: Kind of 0.98r? series, starting with r7
300:
301: * setup.iss, Makefile, version.h: *** empty log message ***
302:
303: * imach.c: Summary: temporary
304:
1.42 brouard 305: 2016-02-17 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 306:
307: * imach.c: Summary: Probably last 0.98 stable version 0.98r6
308:
1.42 brouard 309: 2016-02-16 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 310:
311: * imach.c: Summary: minor bug
312:
313: * imach.c: Summary: 0.99r2
314:
1.42 brouard 315: 2016-02-15 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 316:
317: * imach.c: *** empty log message ***
318:
1.42 brouard 319: 2016-02-12 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 320:
321: * imach.c: Summary: 0.99 Back projections
322:
1.42 brouard 323: 2015-12-23 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 324:
325: * imach.c: Summary: Experimental backcast
326:
1.42 brouard 327: 2015-12-18 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 328:
329: * imach.c: Summary: 0.98r4 Warning and status=-2
330:
331: Version 0.98r4 is now:
332: - displaying an error when status is -1, date of interview unknown and date of death known;
333: - permitting a status -2 when the vital status is unknown at a known date of right truncation.
334: Older changes concerning s=-2, dating from 2005 have been supersed.
335:
336: * Makefile: *** empty log message ***
337:
1.42 brouard 338: 2015-12-16 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 339:
340: * Makefile: *** empty log message ***
341:
342: * imach.c: Summary: 0.98r4 working
343:
344: * Makefile: Summary: linuxrpm added
345:
346: * Makefile: *** empty log message ***
347:
348: * imach.c: Summary: temporary not working
349:
1.42 brouard 350: 2015-12-11 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 351:
352: * imach.c: Summary: 0.98r4
353:
1.42 brouard 354: 2015-12-08 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 355:
356: * Makefile: *** empty log message ***
357:
1.42 brouard 358: 2015-11-21 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 359:
360: * Makefile:
361: Summary: VBoxManage change from execute --image to run --exe and --wait-exit doesn't exist any more
362:
363: * imach.c: Summary: minor typo
364:
365: * imach.c: Summary: 0.98r3 with some graph of projected cross-sectional
366:
367: Author: Nicolas Brouard
368:
1.42 brouard 369: 2015-11-18 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 370:
371: * imach.c: Summary: Start working on projected prevalences
372:
1.42 brouard 373: 2015-11-17 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 374:
375: * imach.c: Summary: Adding ftolpl parameter
376: Author: N Brouard
377:
378: We had difficulties to get smoothed confidence intervals. It was due
379: to the period prevalence which wasn't computed accurately. The inner
380: parameter ftolpl is now an outer parameter of the .imach parameter
381: file after estepm. If ftolpl is small 1.e-4 and estepm too,
382: computation are long.
383:
384: * version.h: *** empty log message ***
385:
386: * imach.c: Summary: temporary
387:
1.42 brouard 388: 2015-10-27 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 389:
390: * Makefile: *** empty log message ***
391:
392: * setup.iss.in: Summary: some new subdirs
393:
394: * imach.c: *** empty log message ***
395:
396: * setup.iss.in:
397: Summary: Adding gnuplot 5.1 with bin and etc for pango fonts
398:
1.42 brouard 399: 2015-10-24 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 400:
401: * imach.c: *** empty log message ***
402:
1.42 brouard 403: 2015-10-23 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 404:
405: * imach.c:
406: Summary: 0.98r3 some clarification for graphs on likelihood contributions
407:
1.42 brouard 408: 2015-10-01 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 409:
410: * imach.c: Summary: Some new graphs of contribution to likelihood
411:
1.42 brouard 412: 2015-09-30 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 413:
414: * Makefile:
415: Summary: Version read from version.h, itself read with cmake
416:
417: * imach.c: Summary: looking at better estimation of the hessian
418:
419: Also a better criteria for convergence to the period prevalence And
420: therefore adding the number of years needed to converge. (The
421: prevalence in any alive state shold sum to one
422:
423: * Makefile: *** empty log message ***
424:
1.42 brouard 425: 2015-09-22 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 426:
427: * imach.c:
428: Summary: Adding some overall graph on contribution to likelihood. Might change
429:
1.42 brouard 430: 2015-09-15 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 431:
432: * Makefile: *** empty log message ***
433:
434: * imach.c: Summary: 0.98r0
435:
436: - Some new graphs like suvival functions
437: - Some bugs fixed like model=1+age+V2.
438:
439: * ChangeLog, Makefile: Summary: 0.98r0
440:
441: * CMakeLists.txt: Summary: Some tests for setup.iss
442:
1.37 brouard 443: 2015-09-15 Nicolas J Brouard <nbrouard@tugault.ined.fr>
444:
445: * (Module): 0.98r0 Some new graphs, some bugs fixed: model=1+age+V2. etc
446:
1.36 brouard 447: 2015-08-18 Nicolas J Brouard <nbrouard@tugault.local>
448:
449: * (Module): Adding error when the covariance matrix doesn't contain the exact number of lines required by the model line.
450:
1.35 brouard 451: 2015-08-03 Nicolas J Brouard <nbrouard@tugault.ined.fr>
452:
453: * (Module): Changing Variance of one-step probabilities into Standard deviation (thanks to Yao-Chi Shih)
454:
455: 2014-12-16 Nicolas J Brouard <nbrouard@tugault.local>
456:
457: * imach.c (Module): Merging 1.61 to 1.162
458:
459: 2014-09-02 Nicolas J Brouard <nbrouard@njbrouard.ined.fr>
460:
461: * prevlim.h (Module):
462:
1.34 brouard 463: 2014-01-26 Nicolas J Brouard <nbrouard@ledermann-2.local>
464:
465: * imach.c (Module): Trying to merge old staffs together while being at Tokyo. Not tested...
466: (Module): Version 0.98nR Running ok, but output format still only works for three covariates.
467:
1.33 brouard 468: 2010-04-29 brouard <brouard@ined.fr>
469:
470: * imach.c (Module): Checking covariates for more complex models
471: than V1+V2. A lot of change to be done. Unstable.
472:
473: 2010-04-26 brouard <brouard@ined.fr>
474:
475: * imach.c (Module): merging some libgsl code. Fixing computation
476: of likelione (using inter/intrapolation if mle = 0) in order to
477: get same likelihood as if mle=1.
478: Some cleaning of code and comments added.
479:
1.32 brouard 480: 2009-10-29 brouard <brouard@ined.fr>
481:
482: * imach.c (Module): Now imach stops if date of birth, at least year of birth, is not given. Some cleaning of the code.
483:
1.31 brouard 484: 2006-06-30 Brouard Nicolas <brouard@localhost>
485:
486: * imach.c (Module): Clarifications on computing e.j
487:
1.30 brouard 488: 2006-04-28 Brouard Nicolas <brouard@localhost>
489:
490: * imach.c (Module): Yes the sum of survivors was wrong since
491: imach-114 because nhstepm was no more computed in the age
492: loop. Now we define nhstepma in the age loop.
1.31 brouard 493: (Module): In order to speed up (in case of numerous covariates) we
494: compute health expectancies (without variances) in a first step
495: and then all the health expectancies with variances or standard
496: deviation (needs data from the Hessian matrices) which slows the
497: computation.
498: In the future we should be able to stop the program is only health
499: expectancies and graph are needed without standard deviations.
1.30 brouard 500:
1.29 lievre 501: 2006-04-04 LIEVRE Agnes <lievre@PC_00697.ined.fr>
502:
503: * imach.iss (Module):
504:
505: * imach.c (Module): bugs in evsi + population file added in htm output file
506:
507: 2006-03-22 LIEVRE Agnes <lievre@PC_00697.ined.fr>
508:
509: * imach.c (Module):
510:
1.27 brouard 511: 2006-03-20 Brouard Nicolas <brouard@localhost>
512:
1.28 brouard 513: * imach.c (Module): <title> changed, corresponds to .htm file
514: name. <head> headers where missing.
515:
1.27 brouard 516: * Makefile (Module): 0.98g
517:
518: * imach.c (Module): Weights can have a decimal point as for
519: English (a comma might work with a correct LC_NUMERIC environment,
520: otherwise the weight is truncated).
521: Modification of warning when the covariates values are not 0 or
522: 1.
523: Version 0.98g
524:
1.24 lievre 525: 2006-03-16 LIEVRE Agnes <lievre@PC_00697.ined.fr>
526:
1.26 lievre 527: * imach.c (Module): Comments concerning covariates added
528:
1.25 lievre 529: * noreg-setup.iss (Module): Version 0.98f
530:
1.24 lievre 531: * Makefile (Module): Version 0.98f make _windows=1 imachcyg-setup
532:
533: * imach.c (Module): refinements in the computation of lli if
534: status=-2 in order to have more reliable computation if stepm is
535: not 1 month. Version 0.98f
536:
1.22 brouard 537: 2006-03-15 Brouard Nicolas <brouard@localhost>
538:
539: * imach.c (Module): Bug if status = -2, the loglikelihood was
540: computed as likelihood omitting the logarithm. Version O.98e
541:
1.21 brouard 542: 2006-03-14 Brouard Nicolas <brouard@localhost>
543:
544: * imach.c (Module): varevsij Comments added explaining the second
545: table of variances if popbased=1 .
546: (Module): Covariances of eij, ekl added, graphs fixed, new html link.
547: (Module): Function pstamp added
548: (Module): Version 0.98d
549:
1.20 brouard 550: 2006-03-06 Brouard Nicolas <brouard@localhost>
551:
552: * imach.c (Module): Variance-covariance wrong links and
553: varian-covariance of ej. is needed (Saito).
554:
1.19 brouard 555: 2006-02-27 Brouard Nicolas <brouard@localhost>
556:
557: * imach.c (Module): One freematrix added in mlikeli!
558:
559: 2006-02-26 Brouard Nicolas <brouard@localhost>
560:
561: * imach.c (Module): Some improvements in processing parameter
562: filename with strsep.
563:
564: 2006-02-24 Brouard Nicolas <brouard@localhost>
565:
566: * imach.c (Module): Memory leaks checks with valgrind and:
567: datafile was not closed, some imatrix were not freed and on matrix
568: allocation too.
569:
1.16 lievre 570: 2006-02-09 LIEVRE Agnes <lievre@PC_00697.ined.fr>
571:
1.18 lievre 572: * strsep.c (Module): Inclusion because not in mingw32!!!
573:
1.17 lievre 574: * setup.iss.in (Module): IMACHSETUPVERSION added
575:
576: * noreg-setup.iss (Module): added to cvs tree
577:
1.16 lievre 578: * Makefile (Module): IMACHSETUPVERSION added
579:
1.15 brouard 580: 2006-01-30 BROUARD Nicolas <brouard@localhost>
581:
1.23 brouard 582: * Makefile (Module, Module): Latest Makefile
583:
1.15 brouard 584: * imach.c (Module): Back to gnuplot.exe instead of wgnuplot.exe
585:
586: 2006-01-27 BROUARD Nicolas <brouard@localhost>
587:
588: * noreg-setup.iss (Module): ADDED
589:
590: 2006-01-24 BROUARD Nicolas <brouard@localhost>
591:
592: * imach.c (Module): Comments (lines starting with a #) are allowed in data.
593:
1.14 brouard 594: 2005-10-25 Nicolas Brouard <brouard@dhcp171.recherche.ined.fr>
595:
596: * Makefile (Module): Added Imach98.pmsp and howto crete a dmg
597:
598: * createdmg.sh (Module): Creates a dmg disk for MaC OS/X
599:
1.12 lievre 600: 2005-09-30 <lievre@PC_00595>
601:
602: * imach.c (Module): sump fixed, loop imx fixed, and simplifications.
1.13 lievre 603: (Module): If the status is missing at the last wave but we know
604: that the person is alive, then we can code his/her status as -2
605: (instead of missing=-1 in earlier versions) and his/her
606: contributions to the likelihood is 1 - Prob of dying from last
607: health status (= 1-p13= p11+p12 in the easiest case of somebody in
608: the healthy state at last known wave). Version is 0.98
1.12 lievre 609:
1.11 brouard 610: 2004-05-20 Brouard Nicolas <brouard@localhost>
611:
612: * imach.c (Repository):
613: Agnes added a direct estimation of mortality (without the need of
614: computing period prevalence and differential mortality). Thus here
615: is version 0.97a which has been distributed to some people at
616: REVES 16 in Brugge using an Inno setup.exe for PCs. Estimates of
617: mortality using covariates is not done today. Estimating direct
618: mortality is a very different process because it doesn't need
619: interpolation because it is easy to get the lx from the force of
620: the mortality mux in the simplest case as for a Gompertz (log mux
621: = a + b*x . But we have been able to incorporate the new code
622: within former imach program (0.96d) without deteriorating too much
623: the understanding of the program.
624:
1.10 brouard 625: 2003-06-25 <brouard@BROUARD>
626:
627: * imach.c (Module): On windows (cygwin) function asctime_r doesn't
628: exist so I changed back to asctime which exists.
629: (Module): Version 0.96b
630:
631: 2003-06-24 <brouard@BROUARD>
632:
633: * imach.c (Module): Some bugs corrected for windows. Also, when
634: mle=-1 a template is output in file "or"mypar.txt with the design
635: of the covariance matrix to be input.
636:
1.9 brouard 637: 2003-06-25 Brouard Nicolas <brouard@homebrou>
638:
639: * imach.c (Repository): Duplicated warning errors corrected.
640: (Repository): Elapsed time after each iteration is now output. It
641: helps to forecast when convergence will be reached. Elapsed time
642: is stamped in powell. We created a new html file for the graphs
643: concerning matrix of covariance. It has extension -cov.htm.
644:
1.8 brouard 645: 2003-06-23 Brouard Nicolas <brouard@homebrou>
646:
647: * imach.c (Repository): Create a sub-directory where all the secondary files are. Only imach, htm, gp and r(imach) are on the main directory. Correct time and other things.
648:
649: 2003-06-18 Brouard Nicolas <brouard@homebrou>
650:
651: * imach.c (Repository): Suppress abusive calls to append to file html (solution was to put fichtm as a global variable. Version 0.96
652:
1.7 brouard 653: 2003-06-17 Brouard Nicolas <brouard@homebrou>
654:
655:
656: * imach.c (Repository): Check when date of death was earlier that
657: current date of interview. It may happen when the death was just
658: prior to the death. In this case, dh was negative and likelihood
659: was wrong (infinity). We still send an "Error" but patch by
660: assuming that the date of death was just one stepm after the
661: interview.
662: (Repository): Because some people have very long ID (first column)
663: we changed int to long in num[] and we added a new lvector for
664: memory allocation. But we also truncated to 8 characters (left
665: truncation)
666:
667: (Repository): No more line truncation errors.
668:
669: 2003-06-14 Brouard Nicolas <brouard@homebrou>
670:
671: * imach.c (Repository): Add of a routine likelione (likelihood
672: only once) which prints on a text file
673: (ilk) the contributions to the likelihood for each
674: individual/wave.
675:
676: 2003-06-13 Brouard Nicolas <brouard@homebrou>
677: * imach.c (Repository): Replace "freqsummary" at a correct
678: place. It differs from routine "prevalence" which may be called
679: many times. Probs is memory consuming and must be used with
680: parcimony.
681:
682: 2003-06-17 <brouard@BROUARD>
683:
684: * timeval.h (Module): Added included file to make use of
685: gettimeofday working on win32 with cygwin.
686:
687: 2003-05-16 Brouard Nicolas <brouard@brouard>
688: * imach.c (Module): Insert of a warning if the delay between two
689: waves is negative.
690:
691: * imach.c (Module):
692:
693: 2003-05-03 <brouard@BROUARD>
694:
695: * imach.c: Some cleaning
696:
697: 2003-03-28 <brouard@BROUARD>
698: * imach.c (Module): In version up to 0.92 likelihood was computed
699: as if date of death was unknown. Death was treated as any other
700: health state: the date of the interview describes the actual state
701: and not the date of a change in health state. The former idea was
702: to consider that at each interview the state was recorded
703: (healthy, disable or death) and IMaCh was corrected; but when we
704: introduced the exact date of death then we should have modified
705: the contribution of an exact death to the likelihood. This new
706: contribution is smaller and very dependent of the step unit
707: stepm. It is no more the probability to die between last interview
708: and month of death but the probability to survive from last
709: interview up to one month before death multiplied by the
710: probability to die within a month. Thanks to Chris
711: Jackson for correcting this bug. Former versions increased
712: mortality artificially. The bad side is that we add another loop
713:
714:
715: which slows down the processing. The difference can be up to 10%
716:
717:
718: lower mortality.
719:
720:
721:
722:
723:
724: 2002-05-30 <brouard@BROUARD>
725:
726:
727:
728:
729:
730: *
731:
732:
733:
734:
735:
736: * imach.c (Module): Add correlation matrix of one-step
737:
738:
739: probabilities and covariance matrix
740:
741:
742:
743:
744:
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