Annotation of imach/src/ChangeLog, revision 1.44
1.43 brouard 1: 2021-02-20 Nicolas Brouard <brouard@ined.fr>
2:
3: * imach.c (Module): Fix bug on quitting after result lines!
1.44 ! brouard 4: (Module): Version 0.99r21
1.43 brouard 5:
1.42 brouard 6: 2021-02-12 Nicolas Brouard <brouard@ined.fr>
7:
8: * imach.c (Module): The use of a Windows BOM (huge) file is now an error
9:
10:
11: 2021-02-11 Nicolas Brouard <brouard@ined.fr>
1.41 brouard 12:
13: * (Module): imach.c Someone entered 'results:' instead of 'result:'. Now it is an error which is printed.
14:
1.42 brouard 15: 2020-02-22 Brouard Nicolas <brouard@ined.fr>
1.40 brouard 16:
17: * (Module): imach.c Update mle=-3 (for computing Life expectancy
18: and life table from the data without any state)
19:
1.42 brouard 20: 2019-05-20 Brouard Nicolas <brouard@ined.fr>
1.39 brouard 21:
22: * version.h: Summary: version 0.99.r19
23:
24: * imach.c: Summary: Projection syntax simplified
25: We can now start projections, forward or backward, from the mean date
26: of inteviews up to or down to a number of years of projection:
27: prevforecast=1 yearsfproj=15.3 mobil_average=0
28: or
29: prevforecast=1 starting-proj-date=1/1/2007 final-proj-date=12/31/2017 mobil_average=0
30: or
31: prevbackcast=1 yearsbproj=12.3 mobil_average=1
32: or
33: prevbackcast=1 starting-back-date=1/10/1999 final-back-date=1/1/1985 mobil_average=1
34:
1.42 brouard 35: 2019-05-18 Brouard Nicolas <brouard@ined.fr>
1.39 brouard 36:
37: * imach.c: Summary: doxygen tex bug
38:
1.42 brouard 39: 2019-05-16 Brouard Nicolas <brouard@ined.fr>
1.39 brouard 40:
41: * imach.c: Summary: There was some wrong lines added
42:
1.42 brouard 43: 2019-05-09 Brouard Nicolas <brouard@ined.fr>
1.39 brouard 44:
45: * Makefile, imach.c: *** empty log message ***
46:
47: * ChangeLog: Summary: C=
48:
49: * imach.c: Summary: Some updates
50:
51: * imach.c: Summary: Before ncovmax
52:
53: * version.h: *** empty log message ***
54:
55: * imach.c: Summary: 0.99r18 unlimited number of individuals
56: The number n which was limited to 20,000 cases is now unlimited, from firstobs to lastobs. If the number is too for the virtual memory, probably an error will occur.
57:
1.42 brouard 58: 2018-12-13 Brouard Nicolas <brouard@ined.fr>
1.39 brouard 59:
60: * imach.c: Summary: Bug for young ages (<-30) will be in r17
61:
1.42 brouard 62: 2018-12-05 Brouard Nicolas <brouard@ined.fr>
1.39 brouard 63:
64: * Makefile: Summary: 0.99r16
65:
1.42 brouard 66: 2018-05-02 Brouard Nicolas <brouard@ined.fr>
1.39 brouard 67:
68: * imach.c: Summary: Some bugs fixed
69:
1.42 brouard 70: 2018-05-02 Brouard Nicolas <brouard@ined.fr>
1.39 brouard 71:
72: * imach.c: Summary: Bug for young ages (<-30) will be in r17
73:
1.42 brouard 74: 2018-05-02 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 75:
76: * imach.c: Summary: Some bugs fixed
77:
1.42 brouard 78: 2018-05-01 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 79:
80: * imach.c:
81: Summary: Bug fixed by providing frequencies only for non missing covariates
82:
1.42 brouard 83: 2018-04-27 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 84:
85: * imach.c: Summary: some minor bugs
86:
1.42 brouard 87: 2018-04-21 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 88:
89: * README.txt: *** empty log message ***
90:
91: * imach.c: Summary: Some bugs fixed, valgrind tested
92:
1.42 brouard 93: 2018-04-20 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 94:
95: * Makefile, README.txt, setup.iss: Summary: imach 0.99r16
96:
97: * imach.c:
98: Summary: Computing mean and stdeviation of fixed quantitative variables
99:
1.42 brouard 100: 2018-04-19 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 101:
102: * imach.c: Summary: Some minor bugs fixed
103:
104: * version.h: *** empty log message ***
105:
1.42 brouard 106: 2018-02-27 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 107:
108: * imach.c: *** empty log message ***
109:
110: * imach.c: Summary: Adding second argument for quitting
111:
1.42 brouard 112: 2018-02-21 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 113:
114: * Makefile, README.txt, imach.c: Summary: 0.99r15
115: New Makefile with recent VirtualBox 5.26. Bug in sqrt negatve in imach.c
116:
1.42 brouard 117: 2017-07-20 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 118:
119: * imach.c: Summary: temporary working
120:
1.42 brouard 121: 2017-07-19 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 122:
123: * imach.c: Summary: Bug for mobil_average=0 and prevforecast fixed(?)
124:
1.42 brouard 125: 2017-07-17 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 126:
127: * imach.c: Summary: BOM files can be read now
128:
1.42 brouard 129: 2017-06-30 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 130:
131: * imach.c: Summary: Graphs improvements
132:
133: * imach.c: Summary: Saito's color
134:
1.42 brouard 135: 2017-06-29 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 136:
137: * imach.c: Summary: Version 0.99r14
138:
1.42 brouard 139: 2017-06-27 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 140:
141: * imach.c: Summary: More documentation on projections
142:
143: * imach.c: Summary: Color of backprojection changed from 6 to 5(yellow)
144:
145: * imach.c: Summary: Some bug with rint
146:
1.42 brouard 147: 2017-05-24 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 148:
149: * imach.c: *** empty log message ***
150:
1.42 brouard 151: 2017-05-23 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 152:
153: * imach.c: Summary: Code into subroutine, cleanings
154:
1.42 brouard 155: 2017-05-18 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 156:
157: * imach.c:
158: Summary: backprojection and confidence intervals of backprevalence
159:
1.42 brouard 160: 2017-05-13 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 161:
162: * imach.c: Summary: temporary save for backprojection
163:
164: * imach.c: Summary: Version 0.99r13 (improvements and bugs fixed)
165:
1.42 brouard 166: 2017-04-26 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 167:
168: * imach.c: Summary: imach 0.99r13 Some bugs fixed
169:
170: * imach.c: Summary: Labels in graphs
171:
1.42 brouard 172: 2017-04-24 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 173:
174: * imach.c: Summary: to save
175:
1.42 brouard 176: 2017-04-18 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 177:
178: * imach.c: *** empty log message ***
179:
1.42 brouard 180: 2017-04-05 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 181:
182: * imach.c: Summary: Bug in E_ as well as in T_ fixed nres-1 vs k1-1
183:
1.42 brouard 184: 2017-04-04 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 185:
186: * imach.c: Summary: Gnuplot indexations fixed (humm)
187:
188: * imach.c:
189: Summary: Some errors to warnings only if date of death is unknown but status is death we could set to pi3
190:
1.42 brouard 191: 2017-04-03 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 192:
193: * imach.c: Summary: Version 0.99r12
194: Some cleanings, conformed with updated documentation.
195:
1.42 brouard 196: 2017-03-30 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 197:
198: * version.h: *** empty log message ***
199:
200: * version.h: Summary:0.99r11
201:
1.42 brouard 202: 2017-03-29 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 203:
204: * imach.c: Summary: Temp
205:
1.42 brouard 206: 2017-03-27 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 207:
208: * imach.c: Summary: Temporary
209:
1.42 brouard 210: 2017-03-08 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 211:
212: * imach.c: Summary: IMaCh version 0.99r10 bugs in gnuplot fixed
213:
214: * imach.c: Summary: Fixing data parameter line
215:
1.42 brouard 216: 2016-12-15 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 217:
218: * imach.c: Summary: 0.99 in progress
219:
1.42 brouard 220: 2016-09-15 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 221:
222: * imach.c: *** empty log message ***
223:
224: * imach.c: Summary: not working
225:
1.42 brouard 226: 2016-09-08 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 227:
228: * imach.c: Summary: continue
229:
1.42 brouard 230: 2016-09-07 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 231:
232: * imach.c: Summary: Starting values from frequencies
233:
234: * imach.c: *** empty log message ***
235:
1.42 brouard 236: 2016-09-02 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 237:
238: * imach.c: *** empty log message ***
239:
1.42 brouard 240: 2016-08-30 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 241:
242: * imach.c: Summary: Fixing a lots
243:
1.42 brouard 244: 2016-08-29 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 245:
246: * imach.c: Summary: gnuplot problem in Back projection to fix
247:
248: * imach.c: Summary: Better
249:
1.42 brouard 250: 2016-08-26 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 251:
252: * imach.c:
253: Summary: Improvement in Powell output in order to copy and paste
254:
255: * imach.c: Summary: Starting tests of 0.99
256:
257: * imach.c: Summary: to valgrind
258:
1.42 brouard 259: 2016-08-25 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 260:
261: * imach.c: *** empty log message ***
262:
1.42 brouard 263: 2016-08-23 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 264:
265: * imach.c: *** empty log message ***
266:
267: * imach.c: Summary: not working
268:
1.42 brouard 269: 2016-08-22 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 270:
271: * imach.c: Summary: not working
272:
273: * imach.c: Summary: Not working
274:
1.42 brouard 275: 2016-07-23 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 276:
277: * imach.c: Summary: Completing for func too
278:
1.42 brouard 279: 2016-07-22 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 280:
281: * imach.c: Summary: Fixing some arrays, still debugging
282:
1.42 brouard 283: 2016-07-21 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 284:
285: * imach.c:
286: Summary: 0.99 working (more or less) for Asian Workshop on multitate methods
287:
1.42 brouard 288: 2016-07-12 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 289:
290: * imach.c: Summary: temp
291:
292: * imach.c: Summary: saving but not running
293:
1.42 brouard 294: 2016-07-01 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 295:
296: * imach.c: Summary: Fixes
297:
1.42 brouard 298: 2016-02-19 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 299:
300: * imach-0.98r.c: Summary: Kind of 0.98r? series, starting with r7
301:
302: * setup.iss, Makefile, version.h: *** empty log message ***
303:
304: * imach.c: Summary: temporary
305:
1.42 brouard 306: 2016-02-17 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 307:
308: * imach.c: Summary: Probably last 0.98 stable version 0.98r6
309:
1.42 brouard 310: 2016-02-16 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 311:
312: * imach.c: Summary: minor bug
313:
314: * imach.c: Summary: 0.99r2
315:
1.42 brouard 316: 2016-02-15 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 317:
318: * imach.c: *** empty log message ***
319:
1.42 brouard 320: 2016-02-12 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 321:
322: * imach.c: Summary: 0.99 Back projections
323:
1.42 brouard 324: 2015-12-23 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 325:
326: * imach.c: Summary: Experimental backcast
327:
1.42 brouard 328: 2015-12-18 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 329:
330: * imach.c: Summary: 0.98r4 Warning and status=-2
331:
332: Version 0.98r4 is now:
333: - displaying an error when status is -1, date of interview unknown and date of death known;
334: - permitting a status -2 when the vital status is unknown at a known date of right truncation.
335: Older changes concerning s=-2, dating from 2005 have been supersed.
336:
337: * Makefile: *** empty log message ***
338:
1.42 brouard 339: 2015-12-16 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 340:
341: * Makefile: *** empty log message ***
342:
343: * imach.c: Summary: 0.98r4 working
344:
345: * Makefile: Summary: linuxrpm added
346:
347: * Makefile: *** empty log message ***
348:
349: * imach.c: Summary: temporary not working
350:
1.42 brouard 351: 2015-12-11 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 352:
353: * imach.c: Summary: 0.98r4
354:
1.42 brouard 355: 2015-12-08 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 356:
357: * Makefile: *** empty log message ***
358:
1.42 brouard 359: 2015-11-21 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 360:
361: * Makefile:
362: Summary: VBoxManage change from execute --image to run --exe and --wait-exit doesn't exist any more
363:
364: * imach.c: Summary: minor typo
365:
366: * imach.c: Summary: 0.98r3 with some graph of projected cross-sectional
367:
368: Author: Nicolas Brouard
369:
1.42 brouard 370: 2015-11-18 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 371:
372: * imach.c: Summary: Start working on projected prevalences
373:
1.42 brouard 374: 2015-11-17 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 375:
376: * imach.c: Summary: Adding ftolpl parameter
377: Author: N Brouard
378:
379: We had difficulties to get smoothed confidence intervals. It was due
380: to the period prevalence which wasn't computed accurately. The inner
381: parameter ftolpl is now an outer parameter of the .imach parameter
382: file after estepm. If ftolpl is small 1.e-4 and estepm too,
383: computation are long.
384:
385: * version.h: *** empty log message ***
386:
387: * imach.c: Summary: temporary
388:
1.42 brouard 389: 2015-10-27 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 390:
391: * Makefile: *** empty log message ***
392:
393: * setup.iss.in: Summary: some new subdirs
394:
395: * imach.c: *** empty log message ***
396:
397: * setup.iss.in:
398: Summary: Adding gnuplot 5.1 with bin and etc for pango fonts
399:
1.42 brouard 400: 2015-10-24 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 401:
402: * imach.c: *** empty log message ***
403:
1.42 brouard 404: 2015-10-23 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 405:
406: * imach.c:
407: Summary: 0.98r3 some clarification for graphs on likelihood contributions
408:
1.42 brouard 409: 2015-10-01 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 410:
411: * imach.c: Summary: Some new graphs of contribution to likelihood
412:
1.42 brouard 413: 2015-09-30 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 414:
415: * Makefile:
416: Summary: Version read from version.h, itself read with cmake
417:
418: * imach.c: Summary: looking at better estimation of the hessian
419:
420: Also a better criteria for convergence to the period prevalence And
421: therefore adding the number of years needed to converge. (The
422: prevalence in any alive state shold sum to one
423:
424: * Makefile: *** empty log message ***
425:
1.42 brouard 426: 2015-09-22 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 427:
428: * imach.c:
429: Summary: Adding some overall graph on contribution to likelihood. Might change
430:
1.42 brouard 431: 2015-09-15 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 432:
433: * Makefile: *** empty log message ***
434:
435: * imach.c: Summary: 0.98r0
436:
437: - Some new graphs like suvival functions
438: - Some bugs fixed like model=1+age+V2.
439:
440: * ChangeLog, Makefile: Summary: 0.98r0
441:
442: * CMakeLists.txt: Summary: Some tests for setup.iss
443:
1.37 brouard 444: 2015-09-15 Nicolas J Brouard <nbrouard@tugault.ined.fr>
445:
446: * (Module): 0.98r0 Some new graphs, some bugs fixed: model=1+age+V2. etc
447:
1.36 brouard 448: 2015-08-18 Nicolas J Brouard <nbrouard@tugault.local>
449:
450: * (Module): Adding error when the covariance matrix doesn't contain the exact number of lines required by the model line.
451:
1.35 brouard 452: 2015-08-03 Nicolas J Brouard <nbrouard@tugault.ined.fr>
453:
454: * (Module): Changing Variance of one-step probabilities into Standard deviation (thanks to Yao-Chi Shih)
455:
456: 2014-12-16 Nicolas J Brouard <nbrouard@tugault.local>
457:
458: * imach.c (Module): Merging 1.61 to 1.162
459:
460: 2014-09-02 Nicolas J Brouard <nbrouard@njbrouard.ined.fr>
461:
462: * prevlim.h (Module):
463:
1.34 brouard 464: 2014-01-26 Nicolas J Brouard <nbrouard@ledermann-2.local>
465:
466: * imach.c (Module): Trying to merge old staffs together while being at Tokyo. Not tested...
467: (Module): Version 0.98nR Running ok, but output format still only works for three covariates.
468:
1.33 brouard 469: 2010-04-29 brouard <brouard@ined.fr>
470:
471: * imach.c (Module): Checking covariates for more complex models
472: than V1+V2. A lot of change to be done. Unstable.
473:
474: 2010-04-26 brouard <brouard@ined.fr>
475:
476: * imach.c (Module): merging some libgsl code. Fixing computation
477: of likelione (using inter/intrapolation if mle = 0) in order to
478: get same likelihood as if mle=1.
479: Some cleaning of code and comments added.
480:
1.32 brouard 481: 2009-10-29 brouard <brouard@ined.fr>
482:
483: * imach.c (Module): Now imach stops if date of birth, at least year of birth, is not given. Some cleaning of the code.
484:
1.31 brouard 485: 2006-06-30 Brouard Nicolas <brouard@localhost>
486:
487: * imach.c (Module): Clarifications on computing e.j
488:
1.30 brouard 489: 2006-04-28 Brouard Nicolas <brouard@localhost>
490:
491: * imach.c (Module): Yes the sum of survivors was wrong since
492: imach-114 because nhstepm was no more computed in the age
493: loop. Now we define nhstepma in the age loop.
1.31 brouard 494: (Module): In order to speed up (in case of numerous covariates) we
495: compute health expectancies (without variances) in a first step
496: and then all the health expectancies with variances or standard
497: deviation (needs data from the Hessian matrices) which slows the
498: computation.
499: In the future we should be able to stop the program is only health
500: expectancies and graph are needed without standard deviations.
1.30 brouard 501:
1.29 lievre 502: 2006-04-04 LIEVRE Agnes <lievre@PC_00697.ined.fr>
503:
504: * imach.iss (Module):
505:
506: * imach.c (Module): bugs in evsi + population file added in htm output file
507:
508: 2006-03-22 LIEVRE Agnes <lievre@PC_00697.ined.fr>
509:
510: * imach.c (Module):
511:
1.27 brouard 512: 2006-03-20 Brouard Nicolas <brouard@localhost>
513:
1.28 brouard 514: * imach.c (Module): <title> changed, corresponds to .htm file
515: name. <head> headers where missing.
516:
1.27 brouard 517: * Makefile (Module): 0.98g
518:
519: * imach.c (Module): Weights can have a decimal point as for
520: English (a comma might work with a correct LC_NUMERIC environment,
521: otherwise the weight is truncated).
522: Modification of warning when the covariates values are not 0 or
523: 1.
524: Version 0.98g
525:
1.24 lievre 526: 2006-03-16 LIEVRE Agnes <lievre@PC_00697.ined.fr>
527:
1.26 lievre 528: * imach.c (Module): Comments concerning covariates added
529:
1.25 lievre 530: * noreg-setup.iss (Module): Version 0.98f
531:
1.24 lievre 532: * Makefile (Module): Version 0.98f make _windows=1 imachcyg-setup
533:
534: * imach.c (Module): refinements in the computation of lli if
535: status=-2 in order to have more reliable computation if stepm is
536: not 1 month. Version 0.98f
537:
1.22 brouard 538: 2006-03-15 Brouard Nicolas <brouard@localhost>
539:
540: * imach.c (Module): Bug if status = -2, the loglikelihood was
541: computed as likelihood omitting the logarithm. Version O.98e
542:
1.21 brouard 543: 2006-03-14 Brouard Nicolas <brouard@localhost>
544:
545: * imach.c (Module): varevsij Comments added explaining the second
546: table of variances if popbased=1 .
547: (Module): Covariances of eij, ekl added, graphs fixed, new html link.
548: (Module): Function pstamp added
549: (Module): Version 0.98d
550:
1.20 brouard 551: 2006-03-06 Brouard Nicolas <brouard@localhost>
552:
553: * imach.c (Module): Variance-covariance wrong links and
554: varian-covariance of ej. is needed (Saito).
555:
1.19 brouard 556: 2006-02-27 Brouard Nicolas <brouard@localhost>
557:
558: * imach.c (Module): One freematrix added in mlikeli!
559:
560: 2006-02-26 Brouard Nicolas <brouard@localhost>
561:
562: * imach.c (Module): Some improvements in processing parameter
563: filename with strsep.
564:
565: 2006-02-24 Brouard Nicolas <brouard@localhost>
566:
567: * imach.c (Module): Memory leaks checks with valgrind and:
568: datafile was not closed, some imatrix were not freed and on matrix
569: allocation too.
570:
1.16 lievre 571: 2006-02-09 LIEVRE Agnes <lievre@PC_00697.ined.fr>
572:
1.18 lievre 573: * strsep.c (Module): Inclusion because not in mingw32!!!
574:
1.17 lievre 575: * setup.iss.in (Module): IMACHSETUPVERSION added
576:
577: * noreg-setup.iss (Module): added to cvs tree
578:
1.16 lievre 579: * Makefile (Module): IMACHSETUPVERSION added
580:
1.15 brouard 581: 2006-01-30 BROUARD Nicolas <brouard@localhost>
582:
1.23 brouard 583: * Makefile (Module, Module): Latest Makefile
584:
1.15 brouard 585: * imach.c (Module): Back to gnuplot.exe instead of wgnuplot.exe
586:
587: 2006-01-27 BROUARD Nicolas <brouard@localhost>
588:
589: * noreg-setup.iss (Module): ADDED
590:
591: 2006-01-24 BROUARD Nicolas <brouard@localhost>
592:
593: * imach.c (Module): Comments (lines starting with a #) are allowed in data.
594:
1.14 brouard 595: 2005-10-25 Nicolas Brouard <brouard@dhcp171.recherche.ined.fr>
596:
597: * Makefile (Module): Added Imach98.pmsp and howto crete a dmg
598:
599: * createdmg.sh (Module): Creates a dmg disk for MaC OS/X
600:
1.12 lievre 601: 2005-09-30 <lievre@PC_00595>
602:
603: * imach.c (Module): sump fixed, loop imx fixed, and simplifications.
1.13 lievre 604: (Module): If the status is missing at the last wave but we know
605: that the person is alive, then we can code his/her status as -2
606: (instead of missing=-1 in earlier versions) and his/her
607: contributions to the likelihood is 1 - Prob of dying from last
608: health status (= 1-p13= p11+p12 in the easiest case of somebody in
609: the healthy state at last known wave). Version is 0.98
1.12 lievre 610:
1.11 brouard 611: 2004-05-20 Brouard Nicolas <brouard@localhost>
612:
613: * imach.c (Repository):
614: Agnes added a direct estimation of mortality (without the need of
615: computing period prevalence and differential mortality). Thus here
616: is version 0.97a which has been distributed to some people at
617: REVES 16 in Brugge using an Inno setup.exe for PCs. Estimates of
618: mortality using covariates is not done today. Estimating direct
619: mortality is a very different process because it doesn't need
620: interpolation because it is easy to get the lx from the force of
621: the mortality mux in the simplest case as for a Gompertz (log mux
622: = a + b*x . But we have been able to incorporate the new code
623: within former imach program (0.96d) without deteriorating too much
624: the understanding of the program.
625:
1.10 brouard 626: 2003-06-25 <brouard@BROUARD>
627:
628: * imach.c (Module): On windows (cygwin) function asctime_r doesn't
629: exist so I changed back to asctime which exists.
630: (Module): Version 0.96b
631:
632: 2003-06-24 <brouard@BROUARD>
633:
634: * imach.c (Module): Some bugs corrected for windows. Also, when
635: mle=-1 a template is output in file "or"mypar.txt with the design
636: of the covariance matrix to be input.
637:
1.9 brouard 638: 2003-06-25 Brouard Nicolas <brouard@homebrou>
639:
640: * imach.c (Repository): Duplicated warning errors corrected.
641: (Repository): Elapsed time after each iteration is now output. It
642: helps to forecast when convergence will be reached. Elapsed time
643: is stamped in powell. We created a new html file for the graphs
644: concerning matrix of covariance. It has extension -cov.htm.
645:
1.8 brouard 646: 2003-06-23 Brouard Nicolas <brouard@homebrou>
647:
648: * imach.c (Repository): Create a sub-directory where all the secondary files are. Only imach, htm, gp and r(imach) are on the main directory. Correct time and other things.
649:
650: 2003-06-18 Brouard Nicolas <brouard@homebrou>
651:
652: * imach.c (Repository): Suppress abusive calls to append to file html (solution was to put fichtm as a global variable. Version 0.96
653:
1.7 brouard 654: 2003-06-17 Brouard Nicolas <brouard@homebrou>
655:
656:
657: * imach.c (Repository): Check when date of death was earlier that
658: current date of interview. It may happen when the death was just
659: prior to the death. In this case, dh was negative and likelihood
660: was wrong (infinity). We still send an "Error" but patch by
661: assuming that the date of death was just one stepm after the
662: interview.
663: (Repository): Because some people have very long ID (first column)
664: we changed int to long in num[] and we added a new lvector for
665: memory allocation. But we also truncated to 8 characters (left
666: truncation)
667:
668: (Repository): No more line truncation errors.
669:
670: 2003-06-14 Brouard Nicolas <brouard@homebrou>
671:
672: * imach.c (Repository): Add of a routine likelione (likelihood
673: only once) which prints on a text file
674: (ilk) the contributions to the likelihood for each
675: individual/wave.
676:
677: 2003-06-13 Brouard Nicolas <brouard@homebrou>
678: * imach.c (Repository): Replace "freqsummary" at a correct
679: place. It differs from routine "prevalence" which may be called
680: many times. Probs is memory consuming and must be used with
681: parcimony.
682:
683: 2003-06-17 <brouard@BROUARD>
684:
685: * timeval.h (Module): Added included file to make use of
686: gettimeofday working on win32 with cygwin.
687:
688: 2003-05-16 Brouard Nicolas <brouard@brouard>
689: * imach.c (Module): Insert of a warning if the delay between two
690: waves is negative.
691:
692: * imach.c (Module):
693:
694: 2003-05-03 <brouard@BROUARD>
695:
696: * imach.c: Some cleaning
697:
698: 2003-03-28 <brouard@BROUARD>
699: * imach.c (Module): In version up to 0.92 likelihood was computed
700: as if date of death was unknown. Death was treated as any other
701: health state: the date of the interview describes the actual state
702: and not the date of a change in health state. The former idea was
703: to consider that at each interview the state was recorded
704: (healthy, disable or death) and IMaCh was corrected; but when we
705: introduced the exact date of death then we should have modified
706: the contribution of an exact death to the likelihood. This new
707: contribution is smaller and very dependent of the step unit
708: stepm. It is no more the probability to die between last interview
709: and month of death but the probability to survive from last
710: interview up to one month before death multiplied by the
711: probability to die within a month. Thanks to Chris
712: Jackson for correcting this bug. Former versions increased
713: mortality artificially. The bad side is that we add another loop
714:
715:
716: which slows down the processing. The difference can be up to 10%
717:
718:
719: lower mortality.
720:
721:
722:
723:
724:
725: 2002-05-30 <brouard@BROUARD>
726:
727:
728:
729:
730:
731: *
732:
733:
734:
735:
736:
737: * imach.c (Module): Add correlation matrix of one-step
738:
739:
740: probabilities and covariance matrix
741:
742:
743:
744:
745:
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