Annotation of imach/src/ChangeLog, revision 1.45
1.45 ! brouard 1: 2021-03-31 Nicolas Brouard <brouard@ined.fr>
! 2:
! 3: * imach.c (Module): Still bugs in the result loop. Thank to Holly Benett
! 4:
! 5: 2021-03-08 Nicolas Brouard <brouard@ined.fr>
! 6:
! 7: * ./ (Module): Fixed bug on result:
! 8:
1.43 brouard 9: 2021-02-20 Nicolas Brouard <brouard@ined.fr>
10:
11: * imach.c (Module): Fix bug on quitting after result lines!
1.44 brouard 12: (Module): Version 0.99r21
1.43 brouard 13:
1.42 brouard 14: 2021-02-12 Nicolas Brouard <brouard@ined.fr>
15:
16: * imach.c (Module): The use of a Windows BOM (huge) file is now an error
17:
18:
19: 2021-02-11 Nicolas Brouard <brouard@ined.fr>
1.41 brouard 20:
21: * (Module): imach.c Someone entered 'results:' instead of 'result:'. Now it is an error which is printed.
22:
1.42 brouard 23: 2020-02-22 Brouard Nicolas <brouard@ined.fr>
1.40 brouard 24:
25: * (Module): imach.c Update mle=-3 (for computing Life expectancy
26: and life table from the data without any state)
27:
1.42 brouard 28: 2019-05-20 Brouard Nicolas <brouard@ined.fr>
1.39 brouard 29:
30: * version.h: Summary: version 0.99.r19
31:
32: * imach.c: Summary: Projection syntax simplified
33: We can now start projections, forward or backward, from the mean date
34: of inteviews up to or down to a number of years of projection:
35: prevforecast=1 yearsfproj=15.3 mobil_average=0
36: or
37: prevforecast=1 starting-proj-date=1/1/2007 final-proj-date=12/31/2017 mobil_average=0
38: or
39: prevbackcast=1 yearsbproj=12.3 mobil_average=1
40: or
41: prevbackcast=1 starting-back-date=1/10/1999 final-back-date=1/1/1985 mobil_average=1
42:
1.42 brouard 43: 2019-05-18 Brouard Nicolas <brouard@ined.fr>
1.39 brouard 44:
45: * imach.c: Summary: doxygen tex bug
46:
1.42 brouard 47: 2019-05-16 Brouard Nicolas <brouard@ined.fr>
1.39 brouard 48:
49: * imach.c: Summary: There was some wrong lines added
50:
1.42 brouard 51: 2019-05-09 Brouard Nicolas <brouard@ined.fr>
1.39 brouard 52:
53: * Makefile, imach.c: *** empty log message ***
54:
55: * ChangeLog: Summary: C=
56:
57: * imach.c: Summary: Some updates
58:
59: * imach.c: Summary: Before ncovmax
60:
61: * version.h: *** empty log message ***
62:
63: * imach.c: Summary: 0.99r18 unlimited number of individuals
64: The number n which was limited to 20,000 cases is now unlimited, from firstobs to lastobs. If the number is too for the virtual memory, probably an error will occur.
65:
1.42 brouard 66: 2018-12-13 Brouard Nicolas <brouard@ined.fr>
1.39 brouard 67:
68: * imach.c: Summary: Bug for young ages (<-30) will be in r17
69:
1.42 brouard 70: 2018-12-05 Brouard Nicolas <brouard@ined.fr>
1.39 brouard 71:
72: * Makefile: Summary: 0.99r16
73:
1.42 brouard 74: 2018-05-02 Brouard Nicolas <brouard@ined.fr>
1.39 brouard 75:
76: * imach.c: Summary: Some bugs fixed
77:
1.42 brouard 78: 2018-05-02 Brouard Nicolas <brouard@ined.fr>
1.39 brouard 79:
80: * imach.c: Summary: Bug for young ages (<-30) will be in r17
81:
1.42 brouard 82: 2018-05-02 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 83:
84: * imach.c: Summary: Some bugs fixed
85:
1.42 brouard 86: 2018-05-01 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 87:
88: * imach.c:
89: Summary: Bug fixed by providing frequencies only for non missing covariates
90:
1.42 brouard 91: 2018-04-27 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 92:
93: * imach.c: Summary: some minor bugs
94:
1.42 brouard 95: 2018-04-21 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 96:
97: * README.txt: *** empty log message ***
98:
99: * imach.c: Summary: Some bugs fixed, valgrind tested
100:
1.42 brouard 101: 2018-04-20 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 102:
103: * Makefile, README.txt, setup.iss: Summary: imach 0.99r16
104:
105: * imach.c:
106: Summary: Computing mean and stdeviation of fixed quantitative variables
107:
1.42 brouard 108: 2018-04-19 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 109:
110: * imach.c: Summary: Some minor bugs fixed
111:
112: * version.h: *** empty log message ***
113:
1.42 brouard 114: 2018-02-27 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 115:
116: * imach.c: *** empty log message ***
117:
118: * imach.c: Summary: Adding second argument for quitting
119:
1.42 brouard 120: 2018-02-21 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 121:
122: * Makefile, README.txt, imach.c: Summary: 0.99r15
123: New Makefile with recent VirtualBox 5.26. Bug in sqrt negatve in imach.c
124:
1.42 brouard 125: 2017-07-20 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 126:
127: * imach.c: Summary: temporary working
128:
1.42 brouard 129: 2017-07-19 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 130:
131: * imach.c: Summary: Bug for mobil_average=0 and prevforecast fixed(?)
132:
1.42 brouard 133: 2017-07-17 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 134:
135: * imach.c: Summary: BOM files can be read now
136:
1.42 brouard 137: 2017-06-30 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 138:
139: * imach.c: Summary: Graphs improvements
140:
141: * imach.c: Summary: Saito's color
142:
1.42 brouard 143: 2017-06-29 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 144:
145: * imach.c: Summary: Version 0.99r14
146:
1.42 brouard 147: 2017-06-27 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 148:
149: * imach.c: Summary: More documentation on projections
150:
151: * imach.c: Summary: Color of backprojection changed from 6 to 5(yellow)
152:
153: * imach.c: Summary: Some bug with rint
154:
1.42 brouard 155: 2017-05-24 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 156:
157: * imach.c: *** empty log message ***
158:
1.42 brouard 159: 2017-05-23 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 160:
161: * imach.c: Summary: Code into subroutine, cleanings
162:
1.42 brouard 163: 2017-05-18 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 164:
165: * imach.c:
166: Summary: backprojection and confidence intervals of backprevalence
167:
1.42 brouard 168: 2017-05-13 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 169:
170: * imach.c: Summary: temporary save for backprojection
171:
172: * imach.c: Summary: Version 0.99r13 (improvements and bugs fixed)
173:
1.42 brouard 174: 2017-04-26 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 175:
176: * imach.c: Summary: imach 0.99r13 Some bugs fixed
177:
178: * imach.c: Summary: Labels in graphs
179:
1.42 brouard 180: 2017-04-24 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 181:
182: * imach.c: Summary: to save
183:
1.42 brouard 184: 2017-04-18 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 185:
186: * imach.c: *** empty log message ***
187:
1.42 brouard 188: 2017-04-05 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 189:
190: * imach.c: Summary: Bug in E_ as well as in T_ fixed nres-1 vs k1-1
191:
1.42 brouard 192: 2017-04-04 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 193:
194: * imach.c: Summary: Gnuplot indexations fixed (humm)
195:
196: * imach.c:
197: Summary: Some errors to warnings only if date of death is unknown but status is death we could set to pi3
198:
1.42 brouard 199: 2017-04-03 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 200:
201: * imach.c: Summary: Version 0.99r12
202: Some cleanings, conformed with updated documentation.
203:
1.42 brouard 204: 2017-03-30 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 205:
206: * version.h: *** empty log message ***
207:
208: * version.h: Summary:0.99r11
209:
1.42 brouard 210: 2017-03-29 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 211:
212: * imach.c: Summary: Temp
213:
1.42 brouard 214: 2017-03-27 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 215:
216: * imach.c: Summary: Temporary
217:
1.42 brouard 218: 2017-03-08 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 219:
220: * imach.c: Summary: IMaCh version 0.99r10 bugs in gnuplot fixed
221:
222: * imach.c: Summary: Fixing data parameter line
223:
1.42 brouard 224: 2016-12-15 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 225:
226: * imach.c: Summary: 0.99 in progress
227:
1.42 brouard 228: 2016-09-15 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 229:
230: * imach.c: *** empty log message ***
231:
232: * imach.c: Summary: not working
233:
1.42 brouard 234: 2016-09-08 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 235:
236: * imach.c: Summary: continue
237:
1.42 brouard 238: 2016-09-07 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 239:
240: * imach.c: Summary: Starting values from frequencies
241:
242: * imach.c: *** empty log message ***
243:
1.42 brouard 244: 2016-09-02 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 245:
246: * imach.c: *** empty log message ***
247:
1.42 brouard 248: 2016-08-30 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 249:
250: * imach.c: Summary: Fixing a lots
251:
1.42 brouard 252: 2016-08-29 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 253:
254: * imach.c: Summary: gnuplot problem in Back projection to fix
255:
256: * imach.c: Summary: Better
257:
1.42 brouard 258: 2016-08-26 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 259:
260: * imach.c:
261: Summary: Improvement in Powell output in order to copy and paste
262:
263: * imach.c: Summary: Starting tests of 0.99
264:
265: * imach.c: Summary: to valgrind
266:
1.42 brouard 267: 2016-08-25 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 268:
269: * imach.c: *** empty log message ***
270:
1.42 brouard 271: 2016-08-23 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 272:
273: * imach.c: *** empty log message ***
274:
275: * imach.c: Summary: not working
276:
1.42 brouard 277: 2016-08-22 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 278:
279: * imach.c: Summary: not working
280:
281: * imach.c: Summary: Not working
282:
1.42 brouard 283: 2016-07-23 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 284:
285: * imach.c: Summary: Completing for func too
286:
1.42 brouard 287: 2016-07-22 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 288:
289: * imach.c: Summary: Fixing some arrays, still debugging
290:
1.42 brouard 291: 2016-07-21 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 292:
293: * imach.c:
294: Summary: 0.99 working (more or less) for Asian Workshop on multitate methods
295:
1.42 brouard 296: 2016-07-12 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 297:
298: * imach.c: Summary: temp
299:
300: * imach.c: Summary: saving but not running
301:
1.42 brouard 302: 2016-07-01 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 303:
304: * imach.c: Summary: Fixes
305:
1.42 brouard 306: 2016-02-19 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 307:
308: * imach-0.98r.c: Summary: Kind of 0.98r? series, starting with r7
309:
310: * setup.iss, Makefile, version.h: *** empty log message ***
311:
312: * imach.c: Summary: temporary
313:
1.42 brouard 314: 2016-02-17 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 315:
316: * imach.c: Summary: Probably last 0.98 stable version 0.98r6
317:
1.42 brouard 318: 2016-02-16 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 319:
320: * imach.c: Summary: minor bug
321:
322: * imach.c: Summary: 0.99r2
323:
1.42 brouard 324: 2016-02-15 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 325:
326: * imach.c: *** empty log message ***
327:
1.42 brouard 328: 2016-02-12 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 329:
330: * imach.c: Summary: 0.99 Back projections
331:
1.42 brouard 332: 2015-12-23 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 333:
334: * imach.c: Summary: Experimental backcast
335:
1.42 brouard 336: 2015-12-18 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 337:
338: * imach.c: Summary: 0.98r4 Warning and status=-2
339:
340: Version 0.98r4 is now:
341: - displaying an error when status is -1, date of interview unknown and date of death known;
342: - permitting a status -2 when the vital status is unknown at a known date of right truncation.
343: Older changes concerning s=-2, dating from 2005 have been supersed.
344:
345: * Makefile: *** empty log message ***
346:
1.42 brouard 347: 2015-12-16 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 348:
349: * Makefile: *** empty log message ***
350:
351: * imach.c: Summary: 0.98r4 working
352:
353: * Makefile: Summary: linuxrpm added
354:
355: * Makefile: *** empty log message ***
356:
357: * imach.c: Summary: temporary not working
358:
1.42 brouard 359: 2015-12-11 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 360:
361: * imach.c: Summary: 0.98r4
362:
1.42 brouard 363: 2015-12-08 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 364:
365: * Makefile: *** empty log message ***
366:
1.42 brouard 367: 2015-11-21 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 368:
369: * Makefile:
370: Summary: VBoxManage change from execute --image to run --exe and --wait-exit doesn't exist any more
371:
372: * imach.c: Summary: minor typo
373:
374: * imach.c: Summary: 0.98r3 with some graph of projected cross-sectional
375:
376: Author: Nicolas Brouard
377:
1.42 brouard 378: 2015-11-18 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 379:
380: * imach.c: Summary: Start working on projected prevalences
381:
1.42 brouard 382: 2015-11-17 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 383:
384: * imach.c: Summary: Adding ftolpl parameter
385: Author: N Brouard
386:
387: We had difficulties to get smoothed confidence intervals. It was due
388: to the period prevalence which wasn't computed accurately. The inner
389: parameter ftolpl is now an outer parameter of the .imach parameter
390: file after estepm. If ftolpl is small 1.e-4 and estepm too,
391: computation are long.
392:
393: * version.h: *** empty log message ***
394:
395: * imach.c: Summary: temporary
396:
1.42 brouard 397: 2015-10-27 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 398:
399: * Makefile: *** empty log message ***
400:
401: * setup.iss.in: Summary: some new subdirs
402:
403: * imach.c: *** empty log message ***
404:
405: * setup.iss.in:
406: Summary: Adding gnuplot 5.1 with bin and etc for pango fonts
407:
1.42 brouard 408: 2015-10-24 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 409:
410: * imach.c: *** empty log message ***
411:
1.42 brouard 412: 2015-10-23 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 413:
414: * imach.c:
415: Summary: 0.98r3 some clarification for graphs on likelihood contributions
416:
1.42 brouard 417: 2015-10-01 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 418:
419: * imach.c: Summary: Some new graphs of contribution to likelihood
420:
1.42 brouard 421: 2015-09-30 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 422:
423: * Makefile:
424: Summary: Version read from version.h, itself read with cmake
425:
426: * imach.c: Summary: looking at better estimation of the hessian
427:
428: Also a better criteria for convergence to the period prevalence And
429: therefore adding the number of years needed to converge. (The
430: prevalence in any alive state shold sum to one
431:
432: * Makefile: *** empty log message ***
433:
1.42 brouard 434: 2015-09-22 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 435:
436: * imach.c:
437: Summary: Adding some overall graph on contribution to likelihood. Might change
438:
1.42 brouard 439: 2015-09-15 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 440:
441: * Makefile: *** empty log message ***
442:
443: * imach.c: Summary: 0.98r0
444:
445: - Some new graphs like suvival functions
446: - Some bugs fixed like model=1+age+V2.
447:
448: * ChangeLog, Makefile: Summary: 0.98r0
449:
450: * CMakeLists.txt: Summary: Some tests for setup.iss
451:
1.37 brouard 452: 2015-09-15 Nicolas J Brouard <nbrouard@tugault.ined.fr>
453:
454: * (Module): 0.98r0 Some new graphs, some bugs fixed: model=1+age+V2. etc
455:
1.36 brouard 456: 2015-08-18 Nicolas J Brouard <nbrouard@tugault.local>
457:
458: * (Module): Adding error when the covariance matrix doesn't contain the exact number of lines required by the model line.
459:
1.35 brouard 460: 2015-08-03 Nicolas J Brouard <nbrouard@tugault.ined.fr>
461:
462: * (Module): Changing Variance of one-step probabilities into Standard deviation (thanks to Yao-Chi Shih)
463:
464: 2014-12-16 Nicolas J Brouard <nbrouard@tugault.local>
465:
466: * imach.c (Module): Merging 1.61 to 1.162
467:
468: 2014-09-02 Nicolas J Brouard <nbrouard@njbrouard.ined.fr>
469:
470: * prevlim.h (Module):
471:
1.34 brouard 472: 2014-01-26 Nicolas J Brouard <nbrouard@ledermann-2.local>
473:
474: * imach.c (Module): Trying to merge old staffs together while being at Tokyo. Not tested...
475: (Module): Version 0.98nR Running ok, but output format still only works for three covariates.
476:
1.33 brouard 477: 2010-04-29 brouard <brouard@ined.fr>
478:
479: * imach.c (Module): Checking covariates for more complex models
480: than V1+V2. A lot of change to be done. Unstable.
481:
482: 2010-04-26 brouard <brouard@ined.fr>
483:
484: * imach.c (Module): merging some libgsl code. Fixing computation
485: of likelione (using inter/intrapolation if mle = 0) in order to
486: get same likelihood as if mle=1.
487: Some cleaning of code and comments added.
488:
1.32 brouard 489: 2009-10-29 brouard <brouard@ined.fr>
490:
491: * imach.c (Module): Now imach stops if date of birth, at least year of birth, is not given. Some cleaning of the code.
492:
1.31 brouard 493: 2006-06-30 Brouard Nicolas <brouard@localhost>
494:
495: * imach.c (Module): Clarifications on computing e.j
496:
1.30 brouard 497: 2006-04-28 Brouard Nicolas <brouard@localhost>
498:
499: * imach.c (Module): Yes the sum of survivors was wrong since
500: imach-114 because nhstepm was no more computed in the age
501: loop. Now we define nhstepma in the age loop.
1.31 brouard 502: (Module): In order to speed up (in case of numerous covariates) we
503: compute health expectancies (without variances) in a first step
504: and then all the health expectancies with variances or standard
505: deviation (needs data from the Hessian matrices) which slows the
506: computation.
507: In the future we should be able to stop the program is only health
508: expectancies and graph are needed without standard deviations.
1.30 brouard 509:
1.29 lievre 510: 2006-04-04 LIEVRE Agnes <lievre@PC_00697.ined.fr>
511:
512: * imach.iss (Module):
513:
514: * imach.c (Module): bugs in evsi + population file added in htm output file
515:
516: 2006-03-22 LIEVRE Agnes <lievre@PC_00697.ined.fr>
517:
518: * imach.c (Module):
519:
1.27 brouard 520: 2006-03-20 Brouard Nicolas <brouard@localhost>
521:
1.28 brouard 522: * imach.c (Module): <title> changed, corresponds to .htm file
523: name. <head> headers where missing.
524:
1.27 brouard 525: * Makefile (Module): 0.98g
526:
527: * imach.c (Module): Weights can have a decimal point as for
528: English (a comma might work with a correct LC_NUMERIC environment,
529: otherwise the weight is truncated).
530: Modification of warning when the covariates values are not 0 or
531: 1.
532: Version 0.98g
533:
1.24 lievre 534: 2006-03-16 LIEVRE Agnes <lievre@PC_00697.ined.fr>
535:
1.26 lievre 536: * imach.c (Module): Comments concerning covariates added
537:
1.25 lievre 538: * noreg-setup.iss (Module): Version 0.98f
539:
1.24 lievre 540: * Makefile (Module): Version 0.98f make _windows=1 imachcyg-setup
541:
542: * imach.c (Module): refinements in the computation of lli if
543: status=-2 in order to have more reliable computation if stepm is
544: not 1 month. Version 0.98f
545:
1.22 brouard 546: 2006-03-15 Brouard Nicolas <brouard@localhost>
547:
548: * imach.c (Module): Bug if status = -2, the loglikelihood was
549: computed as likelihood omitting the logarithm. Version O.98e
550:
1.21 brouard 551: 2006-03-14 Brouard Nicolas <brouard@localhost>
552:
553: * imach.c (Module): varevsij Comments added explaining the second
554: table of variances if popbased=1 .
555: (Module): Covariances of eij, ekl added, graphs fixed, new html link.
556: (Module): Function pstamp added
557: (Module): Version 0.98d
558:
1.20 brouard 559: 2006-03-06 Brouard Nicolas <brouard@localhost>
560:
561: * imach.c (Module): Variance-covariance wrong links and
562: varian-covariance of ej. is needed (Saito).
563:
1.19 brouard 564: 2006-02-27 Brouard Nicolas <brouard@localhost>
565:
566: * imach.c (Module): One freematrix added in mlikeli!
567:
568: 2006-02-26 Brouard Nicolas <brouard@localhost>
569:
570: * imach.c (Module): Some improvements in processing parameter
571: filename with strsep.
572:
573: 2006-02-24 Brouard Nicolas <brouard@localhost>
574:
575: * imach.c (Module): Memory leaks checks with valgrind and:
576: datafile was not closed, some imatrix were not freed and on matrix
577: allocation too.
578:
1.16 lievre 579: 2006-02-09 LIEVRE Agnes <lievre@PC_00697.ined.fr>
580:
1.18 lievre 581: * strsep.c (Module): Inclusion because not in mingw32!!!
582:
1.17 lievre 583: * setup.iss.in (Module): IMACHSETUPVERSION added
584:
585: * noreg-setup.iss (Module): added to cvs tree
586:
1.16 lievre 587: * Makefile (Module): IMACHSETUPVERSION added
588:
1.15 brouard 589: 2006-01-30 BROUARD Nicolas <brouard@localhost>
590:
1.23 brouard 591: * Makefile (Module, Module): Latest Makefile
592:
1.15 brouard 593: * imach.c (Module): Back to gnuplot.exe instead of wgnuplot.exe
594:
595: 2006-01-27 BROUARD Nicolas <brouard@localhost>
596:
597: * noreg-setup.iss (Module): ADDED
598:
599: 2006-01-24 BROUARD Nicolas <brouard@localhost>
600:
601: * imach.c (Module): Comments (lines starting with a #) are allowed in data.
602:
1.14 brouard 603: 2005-10-25 Nicolas Brouard <brouard@dhcp171.recherche.ined.fr>
604:
605: * Makefile (Module): Added Imach98.pmsp and howto crete a dmg
606:
607: * createdmg.sh (Module): Creates a dmg disk for MaC OS/X
608:
1.12 lievre 609: 2005-09-30 <lievre@PC_00595>
610:
611: * imach.c (Module): sump fixed, loop imx fixed, and simplifications.
1.13 lievre 612: (Module): If the status is missing at the last wave but we know
613: that the person is alive, then we can code his/her status as -2
614: (instead of missing=-1 in earlier versions) and his/her
615: contributions to the likelihood is 1 - Prob of dying from last
616: health status (= 1-p13= p11+p12 in the easiest case of somebody in
617: the healthy state at last known wave). Version is 0.98
1.12 lievre 618:
1.11 brouard 619: 2004-05-20 Brouard Nicolas <brouard@localhost>
620:
621: * imach.c (Repository):
622: Agnes added a direct estimation of mortality (without the need of
623: computing period prevalence and differential mortality). Thus here
624: is version 0.97a which has been distributed to some people at
625: REVES 16 in Brugge using an Inno setup.exe for PCs. Estimates of
626: mortality using covariates is not done today. Estimating direct
627: mortality is a very different process because it doesn't need
628: interpolation because it is easy to get the lx from the force of
629: the mortality mux in the simplest case as for a Gompertz (log mux
630: = a + b*x . But we have been able to incorporate the new code
631: within former imach program (0.96d) without deteriorating too much
632: the understanding of the program.
633:
1.10 brouard 634: 2003-06-25 <brouard@BROUARD>
635:
636: * imach.c (Module): On windows (cygwin) function asctime_r doesn't
637: exist so I changed back to asctime which exists.
638: (Module): Version 0.96b
639:
640: 2003-06-24 <brouard@BROUARD>
641:
642: * imach.c (Module): Some bugs corrected for windows. Also, when
643: mle=-1 a template is output in file "or"mypar.txt with the design
644: of the covariance matrix to be input.
645:
1.9 brouard 646: 2003-06-25 Brouard Nicolas <brouard@homebrou>
647:
648: * imach.c (Repository): Duplicated warning errors corrected.
649: (Repository): Elapsed time after each iteration is now output. It
650: helps to forecast when convergence will be reached. Elapsed time
651: is stamped in powell. We created a new html file for the graphs
652: concerning matrix of covariance. It has extension -cov.htm.
653:
1.8 brouard 654: 2003-06-23 Brouard Nicolas <brouard@homebrou>
655:
656: * imach.c (Repository): Create a sub-directory where all the secondary files are. Only imach, htm, gp and r(imach) are on the main directory. Correct time and other things.
657:
658: 2003-06-18 Brouard Nicolas <brouard@homebrou>
659:
660: * imach.c (Repository): Suppress abusive calls to append to file html (solution was to put fichtm as a global variable. Version 0.96
661:
1.7 brouard 662: 2003-06-17 Brouard Nicolas <brouard@homebrou>
663:
664:
665: * imach.c (Repository): Check when date of death was earlier that
666: current date of interview. It may happen when the death was just
667: prior to the death. In this case, dh was negative and likelihood
668: was wrong (infinity). We still send an "Error" but patch by
669: assuming that the date of death was just one stepm after the
670: interview.
671: (Repository): Because some people have very long ID (first column)
672: we changed int to long in num[] and we added a new lvector for
673: memory allocation. But we also truncated to 8 characters (left
674: truncation)
675:
676: (Repository): No more line truncation errors.
677:
678: 2003-06-14 Brouard Nicolas <brouard@homebrou>
679:
680: * imach.c (Repository): Add of a routine likelione (likelihood
681: only once) which prints on a text file
682: (ilk) the contributions to the likelihood for each
683: individual/wave.
684:
685: 2003-06-13 Brouard Nicolas <brouard@homebrou>
686: * imach.c (Repository): Replace "freqsummary" at a correct
687: place. It differs from routine "prevalence" which may be called
688: many times. Probs is memory consuming and must be used with
689: parcimony.
690:
691: 2003-06-17 <brouard@BROUARD>
692:
693: * timeval.h (Module): Added included file to make use of
694: gettimeofday working on win32 with cygwin.
695:
696: 2003-05-16 Brouard Nicolas <brouard@brouard>
697: * imach.c (Module): Insert of a warning if the delay between two
698: waves is negative.
699:
700: * imach.c (Module):
701:
702: 2003-05-03 <brouard@BROUARD>
703:
704: * imach.c: Some cleaning
705:
706: 2003-03-28 <brouard@BROUARD>
707: * imach.c (Module): In version up to 0.92 likelihood was computed
708: as if date of death was unknown. Death was treated as any other
709: health state: the date of the interview describes the actual state
710: and not the date of a change in health state. The former idea was
711: to consider that at each interview the state was recorded
712: (healthy, disable or death) and IMaCh was corrected; but when we
713: introduced the exact date of death then we should have modified
714: the contribution of an exact death to the likelihood. This new
715: contribution is smaller and very dependent of the step unit
716: stepm. It is no more the probability to die between last interview
717: and month of death but the probability to survive from last
718: interview up to one month before death multiplied by the
719: probability to die within a month. Thanks to Chris
720: Jackson for correcting this bug. Former versions increased
721: mortality artificially. The bad side is that we add another loop
722:
723:
724: which slows down the processing. The difference can be up to 10%
725:
726:
727: lower mortality.
728:
729:
730:
731:
732:
733: 2002-05-30 <brouard@BROUARD>
734:
735:
736:
737:
738:
739: *
740:
741:
742:
743:
744:
745: * imach.c (Module): Add correlation matrix of one-step
746:
747:
748: probabilities and covariance matrix
749:
750:
751:
752:
753:
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