Annotation of imach/src/ChangeLog, revision 1.50
1.50 ! brouard 1: 2022-04-13 Brouard Nicolas <brouard@brouard.name>
! 2:
! 3: * imach.c (Module): Adding link to text data files
! 4:
1.49 brouard 5: 2022-04-11 Nicolas Brouard <brouard@ined.fr>
6:
7: * imach.c (Module): Error in rewriting the 'r' file with yearsfproj or yearsbproj fixed
8:
1.48 brouard 9: 2022-04-05 Brouard Nicolas <brouard@ined.fr>
10:
11: * imach.c (Module): Fixed covariates (dummy or quantitative)
12: with missing values have never been allowed but are ERRORS and
13: program quits. Standard deviations of fixed covariates were
14: wrongly computed. Mean and standard deviations of time varying
15: covariates are still not computed.
16:
17: 2022-03-17 Brouard Nicolas <brouard@ined.fr>
1.47 brouard 18:
19: * 99r25 Improvements in fixing discrepancies between covariates
20: missing in result line but in model.
21:
1.46 brouard 22: *Wed Mar 31 2021 Nicolas Brouard <brouard@ined.fr>
1.45 brouard 23: * imach.c (Module): Still bugs in the result loop. Thank to Holly Benett
24:
1.46 brouard 25: *2021-03-08 Nicolas Brouard <brouard@ined.fr>
1.45 brouard 26:
27: * ./ (Module): Fixed bug on result:
28:
1.46 brouard 29: *2021-02-20 Nicolas Brouard <brouard@ined.fr>
1.43 brouard 30:
31: * imach.c (Module): Fix bug on quitting after result lines!
1.44 brouard 32: (Module): Version 0.99r21
1.43 brouard 33:
1.42 brouard 34: 2021-02-12 Nicolas Brouard <brouard@ined.fr>
35:
36: * imach.c (Module): The use of a Windows BOM (huge) file is now an error
37:
38:
39: 2021-02-11 Nicolas Brouard <brouard@ined.fr>
1.41 brouard 40:
41: * (Module): imach.c Someone entered 'results:' instead of 'result:'. Now it is an error which is printed.
42:
1.42 brouard 43: 2020-02-22 Brouard Nicolas <brouard@ined.fr>
1.40 brouard 44:
45: * (Module): imach.c Update mle=-3 (for computing Life expectancy
46: and life table from the data without any state)
47:
1.42 brouard 48: 2019-05-20 Brouard Nicolas <brouard@ined.fr>
1.39 brouard 49:
50: * version.h: Summary: version 0.99.r19
51:
52: * imach.c: Summary: Projection syntax simplified
53: We can now start projections, forward or backward, from the mean date
54: of inteviews up to or down to a number of years of projection:
55: prevforecast=1 yearsfproj=15.3 mobil_average=0
56: or
57: prevforecast=1 starting-proj-date=1/1/2007 final-proj-date=12/31/2017 mobil_average=0
58: or
59: prevbackcast=1 yearsbproj=12.3 mobil_average=1
60: or
61: prevbackcast=1 starting-back-date=1/10/1999 final-back-date=1/1/1985 mobil_average=1
62:
1.42 brouard 63: 2019-05-18 Brouard Nicolas <brouard@ined.fr>
1.39 brouard 64:
65: * imach.c: Summary: doxygen tex bug
66:
1.42 brouard 67: 2019-05-16 Brouard Nicolas <brouard@ined.fr>
1.39 brouard 68:
69: * imach.c: Summary: There was some wrong lines added
70:
1.42 brouard 71: 2019-05-09 Brouard Nicolas <brouard@ined.fr>
1.39 brouard 72:
73: * Makefile, imach.c: *** empty log message ***
74:
75: * ChangeLog: Summary: C=
76:
77: * imach.c: Summary: Some updates
78:
79: * imach.c: Summary: Before ncovmax
80:
81: * version.h: *** empty log message ***
82:
83: * imach.c: Summary: 0.99r18 unlimited number of individuals
84: The number n which was limited to 20,000 cases is now unlimited, from firstobs to lastobs. If the number is too for the virtual memory, probably an error will occur.
85:
1.42 brouard 86: 2018-12-13 Brouard Nicolas <brouard@ined.fr>
1.39 brouard 87:
88: * imach.c: Summary: Bug for young ages (<-30) will be in r17
89:
1.42 brouard 90: 2018-12-05 Brouard Nicolas <brouard@ined.fr>
1.39 brouard 91:
92: * Makefile: Summary: 0.99r16
93:
1.42 brouard 94: 2018-05-02 Brouard Nicolas <brouard@ined.fr>
1.39 brouard 95:
96: * imach.c: Summary: Some bugs fixed
97:
1.42 brouard 98: 2018-05-02 Brouard Nicolas <brouard@ined.fr>
1.39 brouard 99:
100: * imach.c: Summary: Bug for young ages (<-30) will be in r17
101:
1.42 brouard 102: 2018-05-02 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 103:
104: * imach.c: Summary: Some bugs fixed
105:
1.42 brouard 106: 2018-05-01 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 107:
108: * imach.c:
109: Summary: Bug fixed by providing frequencies only for non missing covariates
110:
1.42 brouard 111: 2018-04-27 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 112:
113: * imach.c: Summary: some minor bugs
114:
1.42 brouard 115: 2018-04-21 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 116:
117: * README.txt: *** empty log message ***
118:
119: * imach.c: Summary: Some bugs fixed, valgrind tested
120:
1.42 brouard 121: 2018-04-20 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 122:
123: * Makefile, README.txt, setup.iss: Summary: imach 0.99r16
124:
125: * imach.c:
126: Summary: Computing mean and stdeviation of fixed quantitative variables
127:
1.42 brouard 128: 2018-04-19 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 129:
130: * imach.c: Summary: Some minor bugs fixed
131:
132: * version.h: *** empty log message ***
133:
1.42 brouard 134: 2018-02-27 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 135:
136: * imach.c: *** empty log message ***
137:
138: * imach.c: Summary: Adding second argument for quitting
139:
1.42 brouard 140: 2018-02-21 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 141:
142: * Makefile, README.txt, imach.c: Summary: 0.99r15
143: New Makefile with recent VirtualBox 5.26. Bug in sqrt negatve in imach.c
144:
1.42 brouard 145: 2017-07-20 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 146:
147: * imach.c: Summary: temporary working
148:
1.42 brouard 149: 2017-07-19 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 150:
151: * imach.c: Summary: Bug for mobil_average=0 and prevforecast fixed(?)
152:
1.42 brouard 153: 2017-07-17 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 154:
155: * imach.c: Summary: BOM files can be read now
156:
1.42 brouard 157: 2017-06-30 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 158:
159: * imach.c: Summary: Graphs improvements
160:
161: * imach.c: Summary: Saito's color
162:
1.42 brouard 163: 2017-06-29 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 164:
165: * imach.c: Summary: Version 0.99r14
166:
1.42 brouard 167: 2017-06-27 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 168:
169: * imach.c: Summary: More documentation on projections
170:
171: * imach.c: Summary: Color of backprojection changed from 6 to 5(yellow)
172:
173: * imach.c: Summary: Some bug with rint
174:
1.42 brouard 175: 2017-05-24 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 176:
177: * imach.c: *** empty log message ***
178:
1.42 brouard 179: 2017-05-23 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 180:
181: * imach.c: Summary: Code into subroutine, cleanings
182:
1.42 brouard 183: 2017-05-18 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 184:
185: * imach.c:
186: Summary: backprojection and confidence intervals of backprevalence
187:
1.42 brouard 188: 2017-05-13 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 189:
190: * imach.c: Summary: temporary save for backprojection
191:
192: * imach.c: Summary: Version 0.99r13 (improvements and bugs fixed)
193:
1.42 brouard 194: 2017-04-26 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 195:
196: * imach.c: Summary: imach 0.99r13 Some bugs fixed
197:
198: * imach.c: Summary: Labels in graphs
199:
1.42 brouard 200: 2017-04-24 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 201:
202: * imach.c: Summary: to save
203:
1.42 brouard 204: 2017-04-18 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 205:
206: * imach.c: *** empty log message ***
207:
1.42 brouard 208: 2017-04-05 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 209:
210: * imach.c: Summary: Bug in E_ as well as in T_ fixed nres-1 vs k1-1
211:
1.42 brouard 212: 2017-04-04 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 213:
214: * imach.c: Summary: Gnuplot indexations fixed (humm)
215:
216: * imach.c:
217: Summary: Some errors to warnings only if date of death is unknown but status is death we could set to pi3
218:
1.42 brouard 219: 2017-04-03 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 220:
221: * imach.c: Summary: Version 0.99r12
222: Some cleanings, conformed with updated documentation.
223:
1.42 brouard 224: 2017-03-30 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 225:
226: * version.h: *** empty log message ***
227:
228: * version.h: Summary:0.99r11
229:
1.42 brouard 230: 2017-03-29 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 231:
232: * imach.c: Summary: Temp
233:
1.42 brouard 234: 2017-03-27 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 235:
236: * imach.c: Summary: Temporary
237:
1.42 brouard 238: 2017-03-08 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 239:
240: * imach.c: Summary: IMaCh version 0.99r10 bugs in gnuplot fixed
241:
242: * imach.c: Summary: Fixing data parameter line
243:
1.42 brouard 244: 2016-12-15 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 245:
246: * imach.c: Summary: 0.99 in progress
247:
1.42 brouard 248: 2016-09-15 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 249:
250: * imach.c: *** empty log message ***
251:
252: * imach.c: Summary: not working
253:
1.42 brouard 254: 2016-09-08 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 255:
256: * imach.c: Summary: continue
257:
1.42 brouard 258: 2016-09-07 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 259:
260: * imach.c: Summary: Starting values from frequencies
261:
262: * imach.c: *** empty log message ***
263:
1.42 brouard 264: 2016-09-02 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 265:
266: * imach.c: *** empty log message ***
267:
1.42 brouard 268: 2016-08-30 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 269:
270: * imach.c: Summary: Fixing a lots
271:
1.42 brouard 272: 2016-08-29 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 273:
274: * imach.c: Summary: gnuplot problem in Back projection to fix
275:
276: * imach.c: Summary: Better
277:
1.42 brouard 278: 2016-08-26 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 279:
280: * imach.c:
281: Summary: Improvement in Powell output in order to copy and paste
282:
283: * imach.c: Summary: Starting tests of 0.99
284:
285: * imach.c: Summary: to valgrind
286:
1.42 brouard 287: 2016-08-25 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 288:
289: * imach.c: *** empty log message ***
290:
1.42 brouard 291: 2016-08-23 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 292:
293: * imach.c: *** empty log message ***
294:
295: * imach.c: Summary: not working
296:
1.42 brouard 297: 2016-08-22 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 298:
299: * imach.c: Summary: not working
300:
301: * imach.c: Summary: Not working
302:
1.42 brouard 303: 2016-07-23 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 304:
305: * imach.c: Summary: Completing for func too
306:
1.42 brouard 307: 2016-07-22 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 308:
309: * imach.c: Summary: Fixing some arrays, still debugging
310:
1.42 brouard 311: 2016-07-21 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 312:
313: * imach.c:
314: Summary: 0.99 working (more or less) for Asian Workshop on multitate methods
315:
1.42 brouard 316: 2016-07-12 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 317:
318: * imach.c: Summary: temp
319:
320: * imach.c: Summary: saving but not running
321:
1.42 brouard 322: 2016-07-01 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 323:
324: * imach.c: Summary: Fixes
325:
1.42 brouard 326: 2016-02-19 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 327:
328: * imach-0.98r.c: Summary: Kind of 0.98r? series, starting with r7
329:
330: * setup.iss, Makefile, version.h: *** empty log message ***
331:
332: * imach.c: Summary: temporary
333:
1.42 brouard 334: 2016-02-17 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 335:
336: * imach.c: Summary: Probably last 0.98 stable version 0.98r6
337:
1.42 brouard 338: 2016-02-16 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 339:
340: * imach.c: Summary: minor bug
341:
342: * imach.c: Summary: 0.99r2
343:
1.42 brouard 344: 2016-02-15 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 345:
346: * imach.c: *** empty log message ***
347:
1.42 brouard 348: 2016-02-12 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 349:
350: * imach.c: Summary: 0.99 Back projections
351:
1.42 brouard 352: 2015-12-23 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 353:
354: * imach.c: Summary: Experimental backcast
355:
1.42 brouard 356: 2015-12-18 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 357:
358: * imach.c: Summary: 0.98r4 Warning and status=-2
359:
360: Version 0.98r4 is now:
361: - displaying an error when status is -1, date of interview unknown and date of death known;
362: - permitting a status -2 when the vital status is unknown at a known date of right truncation.
363: Older changes concerning s=-2, dating from 2005 have been supersed.
364:
365: * Makefile: *** empty log message ***
366:
1.42 brouard 367: 2015-12-16 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 368:
369: * Makefile: *** empty log message ***
370:
371: * imach.c: Summary: 0.98r4 working
372:
373: * Makefile: Summary: linuxrpm added
374:
375: * Makefile: *** empty log message ***
376:
377: * imach.c: Summary: temporary not working
378:
1.42 brouard 379: 2015-12-11 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 380:
381: * imach.c: Summary: 0.98r4
382:
1.42 brouard 383: 2015-12-08 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 384:
385: * Makefile: *** empty log message ***
386:
1.42 brouard 387: 2015-11-21 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 388:
389: * Makefile:
390: Summary: VBoxManage change from execute --image to run --exe and --wait-exit doesn't exist any more
391:
392: * imach.c: Summary: minor typo
393:
394: * imach.c: Summary: 0.98r3 with some graph of projected cross-sectional
395:
396: Author: Nicolas Brouard
397:
1.42 brouard 398: 2015-11-18 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 399:
400: * imach.c: Summary: Start working on projected prevalences
401:
1.42 brouard 402: 2015-11-17 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 403:
404: * imach.c: Summary: Adding ftolpl parameter
405: Author: N Brouard
406:
407: We had difficulties to get smoothed confidence intervals. It was due
408: to the period prevalence which wasn't computed accurately. The inner
409: parameter ftolpl is now an outer parameter of the .imach parameter
410: file after estepm. If ftolpl is small 1.e-4 and estepm too,
411: computation are long.
412:
413: * version.h: *** empty log message ***
414:
415: * imach.c: Summary: temporary
416:
1.42 brouard 417: 2015-10-27 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 418:
419: * Makefile: *** empty log message ***
420:
421: * setup.iss.in: Summary: some new subdirs
422:
423: * imach.c: *** empty log message ***
424:
425: * setup.iss.in:
426: Summary: Adding gnuplot 5.1 with bin and etc for pango fonts
427:
1.42 brouard 428: 2015-10-24 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 429:
430: * imach.c: *** empty log message ***
431:
1.42 brouard 432: 2015-10-23 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 433:
434: * imach.c:
435: Summary: 0.98r3 some clarification for graphs on likelihood contributions
436:
1.42 brouard 437: 2015-10-01 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 438:
439: * imach.c: Summary: Some new graphs of contribution to likelihood
440:
1.42 brouard 441: 2015-09-30 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 442:
443: * Makefile:
444: Summary: Version read from version.h, itself read with cmake
445:
446: * imach.c: Summary: looking at better estimation of the hessian
447:
448: Also a better criteria for convergence to the period prevalence And
449: therefore adding the number of years needed to converge. (The
450: prevalence in any alive state shold sum to one
451:
452: * Makefile: *** empty log message ***
453:
1.42 brouard 454: 2015-09-22 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 455:
456: * imach.c:
457: Summary: Adding some overall graph on contribution to likelihood. Might change
458:
1.42 brouard 459: 2015-09-15 Brouard Nicolas <brouard@ined.fr>
1.38 brouard 460:
461: * Makefile: *** empty log message ***
462:
463: * imach.c: Summary: 0.98r0
464:
1.46 brouard 465: - Some new graphs like survival functions
1.38 brouard 466: - Some bugs fixed like model=1+age+V2.
467:
468: * ChangeLog, Makefile: Summary: 0.98r0
469:
470: * CMakeLists.txt: Summary: Some tests for setup.iss
471:
1.37 brouard 472: 2015-09-15 Nicolas J Brouard <nbrouard@tugault.ined.fr>
473:
474: * (Module): 0.98r0 Some new graphs, some bugs fixed: model=1+age+V2. etc
475:
1.36 brouard 476: 2015-08-18 Nicolas J Brouard <nbrouard@tugault.local>
477:
478: * (Module): Adding error when the covariance matrix doesn't contain the exact number of lines required by the model line.
479:
1.35 brouard 480: 2015-08-03 Nicolas J Brouard <nbrouard@tugault.ined.fr>
481:
482: * (Module): Changing Variance of one-step probabilities into Standard deviation (thanks to Yao-Chi Shih)
483:
484: 2014-12-16 Nicolas J Brouard <nbrouard@tugault.local>
485:
486: * imach.c (Module): Merging 1.61 to 1.162
487:
488: 2014-09-02 Nicolas J Brouard <nbrouard@njbrouard.ined.fr>
489:
490: * prevlim.h (Module):
491:
1.34 brouard 492: 2014-01-26 Nicolas J Brouard <nbrouard@ledermann-2.local>
493:
494: * imach.c (Module): Trying to merge old staffs together while being at Tokyo. Not tested...
495: (Module): Version 0.98nR Running ok, but output format still only works for three covariates.
496:
1.33 brouard 497: 2010-04-29 brouard <brouard@ined.fr>
498:
499: * imach.c (Module): Checking covariates for more complex models
500: than V1+V2. A lot of change to be done. Unstable.
501:
502: 2010-04-26 brouard <brouard@ined.fr>
503:
504: * imach.c (Module): merging some libgsl code. Fixing computation
505: of likelione (using inter/intrapolation if mle = 0) in order to
506: get same likelihood as if mle=1.
507: Some cleaning of code and comments added.
508:
1.32 brouard 509: 2009-10-29 brouard <brouard@ined.fr>
510:
511: * imach.c (Module): Now imach stops if date of birth, at least year of birth, is not given. Some cleaning of the code.
512:
1.31 brouard 513: 2006-06-30 Brouard Nicolas <brouard@localhost>
514:
515: * imach.c (Module): Clarifications on computing e.j
516:
1.30 brouard 517: 2006-04-28 Brouard Nicolas <brouard@localhost>
518:
519: * imach.c (Module): Yes the sum of survivors was wrong since
520: imach-114 because nhstepm was no more computed in the age
521: loop. Now we define nhstepma in the age loop.
1.31 brouard 522: (Module): In order to speed up (in case of numerous covariates) we
523: compute health expectancies (without variances) in a first step
524: and then all the health expectancies with variances or standard
525: deviation (needs data from the Hessian matrices) which slows the
526: computation.
527: In the future we should be able to stop the program is only health
528: expectancies and graph are needed without standard deviations.
1.30 brouard 529:
1.29 lievre 530: 2006-04-04 LIEVRE Agnes <lievre@PC_00697.ined.fr>
531:
532: * imach.iss (Module):
533:
534: * imach.c (Module): bugs in evsi + population file added in htm output file
535:
536: 2006-03-22 LIEVRE Agnes <lievre@PC_00697.ined.fr>
537:
538: * imach.c (Module):
539:
1.27 brouard 540: 2006-03-20 Brouard Nicolas <brouard@localhost>
541:
1.28 brouard 542: * imach.c (Module): <title> changed, corresponds to .htm file
543: name. <head> headers where missing.
544:
1.27 brouard 545: * Makefile (Module): 0.98g
546:
547: * imach.c (Module): Weights can have a decimal point as for
548: English (a comma might work with a correct LC_NUMERIC environment,
549: otherwise the weight is truncated).
550: Modification of warning when the covariates values are not 0 or
551: 1.
552: Version 0.98g
553:
1.24 lievre 554: 2006-03-16 LIEVRE Agnes <lievre@PC_00697.ined.fr>
555:
1.26 lievre 556: * imach.c (Module): Comments concerning covariates added
557:
1.25 lievre 558: * noreg-setup.iss (Module): Version 0.98f
559:
1.24 lievre 560: * Makefile (Module): Version 0.98f make _windows=1 imachcyg-setup
561:
562: * imach.c (Module): refinements in the computation of lli if
563: status=-2 in order to have more reliable computation if stepm is
564: not 1 month. Version 0.98f
565:
1.22 brouard 566: 2006-03-15 Brouard Nicolas <brouard@localhost>
567:
568: * imach.c (Module): Bug if status = -2, the loglikelihood was
569: computed as likelihood omitting the logarithm. Version O.98e
570:
1.21 brouard 571: 2006-03-14 Brouard Nicolas <brouard@localhost>
572:
573: * imach.c (Module): varevsij Comments added explaining the second
574: table of variances if popbased=1 .
575: (Module): Covariances of eij, ekl added, graphs fixed, new html link.
576: (Module): Function pstamp added
577: (Module): Version 0.98d
578:
1.20 brouard 579: 2006-03-06 Brouard Nicolas <brouard@localhost>
580:
581: * imach.c (Module): Variance-covariance wrong links and
582: varian-covariance of ej. is needed (Saito).
583:
1.19 brouard 584: 2006-02-27 Brouard Nicolas <brouard@localhost>
585:
586: * imach.c (Module): One freematrix added in mlikeli!
587:
588: 2006-02-26 Brouard Nicolas <brouard@localhost>
589:
590: * imach.c (Module): Some improvements in processing parameter
591: filename with strsep.
592:
593: 2006-02-24 Brouard Nicolas <brouard@localhost>
594:
595: * imach.c (Module): Memory leaks checks with valgrind and:
596: datafile was not closed, some imatrix were not freed and on matrix
597: allocation too.
598:
1.16 lievre 599: 2006-02-09 LIEVRE Agnes <lievre@PC_00697.ined.fr>
600:
1.18 lievre 601: * strsep.c (Module): Inclusion because not in mingw32!!!
602:
1.17 lievre 603: * setup.iss.in (Module): IMACHSETUPVERSION added
604:
605: * noreg-setup.iss (Module): added to cvs tree
606:
1.16 lievre 607: * Makefile (Module): IMACHSETUPVERSION added
608:
1.15 brouard 609: 2006-01-30 BROUARD Nicolas <brouard@localhost>
610:
1.23 brouard 611: * Makefile (Module, Module): Latest Makefile
612:
1.15 brouard 613: * imach.c (Module): Back to gnuplot.exe instead of wgnuplot.exe
614:
615: 2006-01-27 BROUARD Nicolas <brouard@localhost>
616:
617: * noreg-setup.iss (Module): ADDED
618:
619: 2006-01-24 BROUARD Nicolas <brouard@localhost>
620:
621: * imach.c (Module): Comments (lines starting with a #) are allowed in data.
622:
1.14 brouard 623: 2005-10-25 Nicolas Brouard <brouard@dhcp171.recherche.ined.fr>
624:
625: * Makefile (Module): Added Imach98.pmsp and howto crete a dmg
626:
627: * createdmg.sh (Module): Creates a dmg disk for MaC OS/X
628:
1.12 lievre 629: 2005-09-30 <lievre@PC_00595>
630:
631: * imach.c (Module): sump fixed, loop imx fixed, and simplifications.
1.13 lievre 632: (Module): If the status is missing at the last wave but we know
633: that the person is alive, then we can code his/her status as -2
634: (instead of missing=-1 in earlier versions) and his/her
635: contributions to the likelihood is 1 - Prob of dying from last
636: health status (= 1-p13= p11+p12 in the easiest case of somebody in
637: the healthy state at last known wave). Version is 0.98
1.12 lievre 638:
1.11 brouard 639: 2004-05-20 Brouard Nicolas <brouard@localhost>
640:
641: * imach.c (Repository):
642: Agnes added a direct estimation of mortality (without the need of
643: computing period prevalence and differential mortality). Thus here
644: is version 0.97a which has been distributed to some people at
645: REVES 16 in Brugge using an Inno setup.exe for PCs. Estimates of
646: mortality using covariates is not done today. Estimating direct
647: mortality is a very different process because it doesn't need
648: interpolation because it is easy to get the lx from the force of
649: the mortality mux in the simplest case as for a Gompertz (log mux
650: = a + b*x . But we have been able to incorporate the new code
651: within former imach program (0.96d) without deteriorating too much
652: the understanding of the program.
653:
1.10 brouard 654: 2003-06-25 <brouard@BROUARD>
655:
656: * imach.c (Module): On windows (cygwin) function asctime_r doesn't
657: exist so I changed back to asctime which exists.
658: (Module): Version 0.96b
659:
660: 2003-06-24 <brouard@BROUARD>
661:
662: * imach.c (Module): Some bugs corrected for windows. Also, when
663: mle=-1 a template is output in file "or"mypar.txt with the design
664: of the covariance matrix to be input.
665:
1.9 brouard 666: 2003-06-25 Brouard Nicolas <brouard@homebrou>
667:
668: * imach.c (Repository): Duplicated warning errors corrected.
669: (Repository): Elapsed time after each iteration is now output. It
670: helps to forecast when convergence will be reached. Elapsed time
671: is stamped in powell. We created a new html file for the graphs
672: concerning matrix of covariance. It has extension -cov.htm.
673:
1.8 brouard 674: 2003-06-23 Brouard Nicolas <brouard@homebrou>
675:
676: * imach.c (Repository): Create a sub-directory where all the secondary files are. Only imach, htm, gp and r(imach) are on the main directory. Correct time and other things.
677:
678: 2003-06-18 Brouard Nicolas <brouard@homebrou>
679:
680: * imach.c (Repository): Suppress abusive calls to append to file html (solution was to put fichtm as a global variable. Version 0.96
681:
1.7 brouard 682: 2003-06-17 Brouard Nicolas <brouard@homebrou>
683:
684:
685: * imach.c (Repository): Check when date of death was earlier that
686: current date of interview. It may happen when the death was just
687: prior to the death. In this case, dh was negative and likelihood
688: was wrong (infinity). We still send an "Error" but patch by
689: assuming that the date of death was just one stepm after the
690: interview.
691: (Repository): Because some people have very long ID (first column)
692: we changed int to long in num[] and we added a new lvector for
693: memory allocation. But we also truncated to 8 characters (left
694: truncation)
695:
696: (Repository): No more line truncation errors.
697:
698: 2003-06-14 Brouard Nicolas <brouard@homebrou>
699:
700: * imach.c (Repository): Add of a routine likelione (likelihood
701: only once) which prints on a text file
702: (ilk) the contributions to the likelihood for each
703: individual/wave.
704:
705: 2003-06-13 Brouard Nicolas <brouard@homebrou>
706: * imach.c (Repository): Replace "freqsummary" at a correct
707: place. It differs from routine "prevalence" which may be called
708: many times. Probs is memory consuming and must be used with
709: parcimony.
710:
711: 2003-06-17 <brouard@BROUARD>
712:
713: * timeval.h (Module): Added included file to make use of
714: gettimeofday working on win32 with cygwin.
715:
716: 2003-05-16 Brouard Nicolas <brouard@brouard>
717: * imach.c (Module): Insert of a warning if the delay between two
718: waves is negative.
719:
720: * imach.c (Module):
721:
722: 2003-05-03 <brouard@BROUARD>
723:
724: * imach.c: Some cleaning
725:
726: 2003-03-28 <brouard@BROUARD>
727: * imach.c (Module): In version up to 0.92 likelihood was computed
728: as if date of death was unknown. Death was treated as any other
729: health state: the date of the interview describes the actual state
730: and not the date of a change in health state. The former idea was
731: to consider that at each interview the state was recorded
732: (healthy, disable or death) and IMaCh was corrected; but when we
733: introduced the exact date of death then we should have modified
734: the contribution of an exact death to the likelihood. This new
735: contribution is smaller and very dependent of the step unit
736: stepm. It is no more the probability to die between last interview
737: and month of death but the probability to survive from last
738: interview up to one month before death multiplied by the
739: probability to die within a month. Thanks to Chris
740: Jackson for correcting this bug. Former versions increased
741: mortality artificially. The bad side is that we add another loop
742: which slows down the processing. The difference can be up to 10%
743: lower mortality.
744:
745: 2002-05-30 <brouard@BROUARD>
746: *
747: * imach.c (Module): Add correlation matrix of one-step
748: probabilities and covariance matrix
749:
750:
751:
752:
753:
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