Annotation of imach/src/ChangeLog, revision 1.61
1.61 ! brouard 1: 2022-09-18 Nicolas Brouard <brouard@ined.fr>
! 2:
! 3: * imach.c (Module): Fixing when a state in the data is 0 or higher
! 4: than lstate+ndeath. Fixing the plot of contribution to Likelihood.
! 5:
! 6: 2022-09-14 Nicolas Brouard <brouard@ined.fr>
! 7:
! 8: * imach.c (Module): Version 0.99r39 with colored dummy covariates
! 9: (fixed or time varying), using new last columns of
! 10: ILK_parameter.txt file.
! 11:
1.60 brouard 12: 2022-09-11 Nicolas Brouard <brouard@ined.fr>
13:
14: * imach.c (Module): Adding timevarying products of any kinds,
15: should work before shifting cotvar from ncovcol+nqv columns in
16: order to have a correspondance between the column of cotvar and
17: the id of column.
1.61 ! brouard 18: (Module): Some cleaning and adding covariates in ILK.txt
1.60 brouard 19:
20: 2022-09-09 Nicolas Brouard <brouard@ined.fr>
21:
22: * imach.c (Module): Many improvements for fixing products of fixed
23: timevarying as well as fixed * fixed, and test with quantitative
24: covariate.
25:
1.59 brouard 26: 2022-09-04 Nicolas Brouard <brouard@ined.fr>
27:
28: * imach.c (Module): Now the easy runs i.e. without result or
29: model=1+age only did not work. The defautl combination should be 1
30: and not 0 because everything hasn't been tranformed yet.
31:
32: 2022-09-02 Nicolas Brouard <brouard@ined.fr>
33:
34: * imach.c: Version 0.99r35 because it outputs same results with
35: 1+age+V1+V1*age for females and 1+age for females only
36: (education=1 noweight)
37:
1.58 brouard 38: 2022-08-31 Nicolas Brouard <brouard@ined.fr>
39:
40: * imach.c (Module): Some improvments in fichtm and many verifications 0.99r34
41:
1.56 brouard 42: 2022-08-21 Nicolas Brouard <brouard@ined.fr>
43:
44: * imach.c (Module): Version 0.99r33 A lot of changes in
45: reassigning covariates: my first idea was that people will always
46: use the first covariate V1 into the model but in fact they are
47: producing data with many covariates and can use an equation model
48: with some of the covariate; it means that in a model V2+V3 instead
49: of codtabm(k,Tvaraff[j]) which calculates for combination k, for
50: three covariates (V1, V2, V3) the value of Tvaraff[j], but in fact
51: the equation model is restricted to two variables only (V2, V3)
52: and the combination for V2 should be codtabm(k,1) instead of
53: (codtabm(k,2), and the code should be
54: codtabm(k,TnsdVar[Tvaraff[j]]. Many many changes have been
55: made. All of these should be simplified once a day like we did in
56: hpxij() for example by using precov[nres] which is computed in
57: decoderesult for each nres of each resultline. Loop should be done
58: on the equation model globally by distinguishing only product with
59: age (which are changing with age) and no more on type of
60: covariates, single dummies, single covariates.
61:
62: 2022-08-06 Nicolas Brouard <brouard@ined.fr>
63:
64: * imach.c (Module): Version of imach using partly decoderesult to rebuild xpxij function
65:
66: 2022-08-03 Nicolas Brouard <brouard@ined.fr>
67:
68: * imach.c (Module): Many errors in graphs fixed with Vn*age covariates.
69:
1.55 brouard 70: 2022-07-25 Brouard Nicolas <brouard@brouard.name>
71:
72: * imach.c (Module): Error cptcovn instead of nsd in bmij (was
73: coredumped, revealed by Feiuno, thank you.
1.57 brouard 74:
75: 2022-07-23 Nicolas Brouard <brouard@ined.fr>
76:
77: * r29 W and not sqrt(Wald)
78:
79: 2022-07-22 Nicolas Brouard <brouard@ined.fr>
80:
81: * imach.c (Module): Output of Wald test in the htm file and not only in the log.
82:
1.55 brouard 83: 2022-06-02 Brouard Nicolas <brouard@brouard.name>
84:
85: * imach.c (Module): Adding the Wald tests from the log to the main
86: htm for better display of the maximum likelihood estimators.
87:
88: 2022-05-30 Brouard Nicolas <brouard@brouard.name>
89:
90: * imach.c: With products of covariates (age or dummies or
91: quantitatives), estimates of parameters were good but when
92: estimating variances the positions of newly created covariates
93: were wrongly assigned and results were wrong. Thank to Feinua_Sun!
94:
95: 2022-05-24 Nicolas Brouard <brouard@ined.fr>
96:
97: * imach.c (Module): Some attempts to find a bug of wrong estimates
98: of confidencce intervals with product in the equation modelC
99:
100: 2022-05-15 Nicolas Brouard <brouard@ined.fr>
101:
102: * imach.c (Module): Some minor improvements
103:
104: 2022-04-13 Brouard Nicolas <brouard@brouard.name>
105:
106: * imach.c (Module): Adding link to text data files
107:
108: 2022-04-11 Nicolas Brouard <brouard@ined.fr>
109:
110: * imach.c (Module): Error in rewriting the 'r' file with yearsfproj or yearsbproj fixed
111:
112: 2022-04-05 Brouard Nicolas <brouard@ined.fr>
113:
114: * imach.c (Module): Fixed covariates (dummy or quantitative)
115: with missing values have never been allowed but are ERRORS and
116: program quits. Standard deviations of fixed covariates were
117: wrongly computed. Mean and standard deviations of time varying
118: covariates are still not computed.
119:
120: 2022-03-17 Brouard Nicolas <brouard@ined.fr>
121:
122: * 99r25 Improvements in fixing discrepancies between covariates
123: missing in result line but in model.
124:
125: *Wed Mar 31 2021 Nicolas Brouard <brouard@ined.fr>
126: * imach.c (Module): Still bugs in the result loop. Thank to Holly Benett
127:
128: *2021-03-08 Nicolas Brouard <brouard@ined.fr>
129:
130: * ./ (Module): Fixed bug on result:
131:
132: *2021-02-20 Nicolas Brouard <brouard@ined.fr>
133:
134: * imach.c (Module): Fix bug on quitting after result lines!
135: (Module): Version 0.99r21
136:
137: 2021-02-12 Nicolas Brouard <brouard@ined.fr>
138:
139: * imach.c (Module): The use of a Windows BOM (huge) file is now an error
140:
141:
142: 2021-02-11 Nicolas Brouard <brouard@ined.fr>
143:
144: * (Module): imach.c Someone entered 'results:' instead of 'result:'. Now it is an error which is printed.
145:
146: 2020-02-22 Brouard Nicolas <brouard@ined.fr>
147:
148: * (Module): imach.c Update mle=-3 (for computing Life expectancy
149: and life table from the data without any state)
150:
151: 2019-05-20 Brouard Nicolas <brouard@ined.fr>
152:
153: * version.h: Summary: version 0.99.r19
154:
155: * imach.c: Summary: Projection syntax simplified
156: We can now start projections, forward or backward, from the mean date
157: of inteviews up to or down to a number of years of projection:
158: prevforecast=1 yearsfproj=15.3 mobil_average=0
159: or
160: prevforecast=1 starting-proj-date=1/1/2007 final-proj-date=12/31/2017 mobil_average=0
161: or
162: prevbackcast=1 yearsbproj=12.3 mobil_average=1
163: or
164: prevbackcast=1 starting-back-date=1/10/1999 final-back-date=1/1/1985 mobil_average=1
165:
166: 2019-05-18 Brouard Nicolas <brouard@ined.fr>
167:
168: * imach.c: Summary: doxygen tex bug
169:
170: 2019-05-16 Brouard Nicolas <brouard@ined.fr>
171:
172: * imach.c: Summary: There was some wrong lines added
173:
174: 2019-05-09 Brouard Nicolas <brouard@ined.fr>
175:
176: * Makefile, imach.c: *** empty log message ***
177:
178: * ChangeLog: Summary: C=
179:
180: * imach.c: Summary: Some updates
181:
182: * imach.c: Summary: Before ncovmax
183:
184: * version.h: *** empty log message ***
185:
186: * imach.c: Summary: 0.99r18 unlimited number of individuals
187: The number n which was limited to 20,000 cases is now unlimited, from firstobs to lastobs. If the number is too for the virtual memory, probably an error will occur.
188:
189: 2018-12-13 Brouard Nicolas <brouard@ined.fr>
190:
191: * imach.c: Summary: Bug for young ages (<-30) will be in r17
192:
193: 2018-12-05 Brouard Nicolas <brouard@ined.fr>
194:
195: * Makefile: Summary: 0.99r16
196:
197: 2018-05-02 Brouard Nicolas <brouard@ined.fr>
198:
199: * imach.c: Summary: Some bugs fixed
200:
201: 2018-05-02 Brouard Nicolas <brouard@ined.fr>
202:
203: * imach.c: Summary: Bug for young ages (<-30) will be in r17
204:
205: 2018-05-02 Brouard Nicolas <brouard@ined.fr>
206:
207: * imach.c: Summary: Some bugs fixed
208:
209: 2018-05-01 Brouard Nicolas <brouard@ined.fr>
210:
211: * imach.c:
212: Summary: Bug fixed by providing frequencies only for non missing covariates
213:
214: 2018-04-27 Brouard Nicolas <brouard@ined.fr>
215:
216: * imach.c: Summary: some minor bugs
217:
218: 2018-04-21 Brouard Nicolas <brouard@ined.fr>
219:
220: * README.txt: *** empty log message ***
221:
222: * imach.c: Summary: Some bugs fixed, valgrind tested
223:
224: 2018-04-20 Brouard Nicolas <brouard@ined.fr>
225:
226: * Makefile, README.txt, setup.iss: Summary: imach 0.99r16
227:
228: * imach.c:
229: Summary: Computing mean and stdeviation of fixed quantitative variables
230:
231: 2018-04-19 Brouard Nicolas <brouard@ined.fr>
232:
233: * imach.c: Summary: Some minor bugs fixed
234:
235: * version.h: *** empty log message ***
236:
237: 2018-02-27 Brouard Nicolas <brouard@ined.fr>
238:
239: * imach.c: *** empty log message ***
240:
241: * imach.c: Summary: Adding second argument for quitting
242:
243: 2018-02-21 Brouard Nicolas <brouard@ined.fr>
244:
245: * Makefile, README.txt, imach.c: Summary: 0.99r15
246: New Makefile with recent VirtualBox 5.26. Bug in sqrt negatve in imach.c
247:
248: 2017-07-20 Brouard Nicolas <brouard@ined.fr>
249:
250: * imach.c: Summary: temporary working
251:
252: 2017-07-19 Brouard Nicolas <brouard@ined.fr>
253:
254: * imach.c: Summary: Bug for mobil_average=0 and prevforecast fixed(?)
255:
256: 2017-07-17 Brouard Nicolas <brouard@ined.fr>
257:
258: * imach.c: Summary: BOM files can be read now
259:
260: 2017-06-30 Brouard Nicolas <brouard@ined.fr>
261:
262: * imach.c: Summary: Graphs improvements
263:
264: * imach.c: Summary: Saito's color
265:
266: 2017-06-29 Brouard Nicolas <brouard@ined.fr>
267:
268: * imach.c: Summary: Version 0.99r14
269:
270: 2017-06-27 Brouard Nicolas <brouard@ined.fr>
271:
272: * imach.c: Summary: More documentation on projections
273:
274: * imach.c: Summary: Color of backprojection changed from 6 to 5(yellow)
275:
276: * imach.c: Summary: Some bug with rint
277:
278: 2017-05-24 Brouard Nicolas <brouard@ined.fr>
279:
280: * imach.c: *** empty log message ***
281:
282: 2017-05-23 Brouard Nicolas <brouard@ined.fr>
283:
284: * imach.c: Summary: Code into subroutine, cleanings
285:
286: 2017-05-18 Brouard Nicolas <brouard@ined.fr>
287:
288: * imach.c:
289: Summary: backprojection and confidence intervals of backprevalence
290:
291: 2017-05-13 Brouard Nicolas <brouard@ined.fr>
292:
293: * imach.c: Summary: temporary save for backprojection
294:
295: * imach.c: Summary: Version 0.99r13 (improvements and bugs fixed)
296:
297: 2017-04-26 Brouard Nicolas <brouard@ined.fr>
298:
299: * imach.c: Summary: imach 0.99r13 Some bugs fixed
300:
301: * imach.c: Summary: Labels in graphs
302:
303: 2017-04-24 Brouard Nicolas <brouard@ined.fr>
304:
305: * imach.c: Summary: to save
306:
307: 2017-04-18 Brouard Nicolas <brouard@ined.fr>
308:
309: * imach.c: *** empty log message ***
310:
311: 2017-04-05 Brouard Nicolas <brouard@ined.fr>
312:
313: * imach.c: Summary: Bug in E_ as well as in T_ fixed nres-1 vs k1-1
314:
315: 2017-04-04 Brouard Nicolas <brouard@ined.fr>
316:
317: * imach.c: Summary: Gnuplot indexations fixed (humm)
318:
319: * imach.c:
320: Summary: Some errors to warnings only if date of death is unknown but status is death we could set to pi3
321:
322: 2017-04-03 Brouard Nicolas <brouard@ined.fr>
323:
324: * imach.c: Summary: Version 0.99r12
325: Some cleanings, conformed with updated documentation.
326:
327: 2017-03-30 Brouard Nicolas <brouard@ined.fr>
328:
329: * version.h: *** empty log message ***
330:
331: * version.h: Summary:0.99r11
332:
333: 2017-03-29 Brouard Nicolas <brouard@ined.fr>
334:
335: * imach.c: Summary: Temp
336:
337: 2017-03-27 Brouard Nicolas <brouard@ined.fr>
338:
339: * imach.c: Summary: Temporary
340:
341: 2017-03-08 Brouard Nicolas <brouard@ined.fr>
342:
343: * imach.c: Summary: IMaCh version 0.99r10 bugs in gnuplot fixed
344:
345: * imach.c: Summary: Fixing data parameter line
346:
347: 2016-12-15 Brouard Nicolas <brouard@ined.fr>
348:
349: * imach.c: Summary: 0.99 in progress
350:
351: 2016-09-15 Brouard Nicolas <brouard@ined.fr>
352:
353: * imach.c: *** empty log message ***
354:
355: * imach.c: Summary: not working
356:
357: 2016-09-08 Brouard Nicolas <brouard@ined.fr>
358:
359: * imach.c: Summary: continue
360:
361: 2016-09-07 Brouard Nicolas <brouard@ined.fr>
362:
363: * imach.c: Summary: Starting values from frequencies
364:
365: * imach.c: *** empty log message ***
366:
367: 2016-09-02 Brouard Nicolas <brouard@ined.fr>
368:
369: * imach.c: *** empty log message ***
370:
371: 2016-08-30 Brouard Nicolas <brouard@ined.fr>
372:
373: * imach.c: Summary: Fixing a lots
374:
375: 2016-08-29 Brouard Nicolas <brouard@ined.fr>
376:
377: * imach.c: Summary: gnuplot problem in Back projection to fix
378:
379: * imach.c: Summary: Better
380:
381: 2016-08-26 Brouard Nicolas <brouard@ined.fr>
382:
383: * imach.c:
384: Summary: Improvement in Powell output in order to copy and paste
385:
386: * imach.c: Summary: Starting tests of 0.99
387:
388: * imach.c: Summary: to valgrind
389:
390: 2016-08-25 Brouard Nicolas <brouard@ined.fr>
391:
392: * imach.c: *** empty log message ***
393:
394: 2016-08-23 Brouard Nicolas <brouard@ined.fr>
395:
396: * imach.c: *** empty log message ***
397:
398: * imach.c: Summary: not working
399:
400: 2016-08-22 Brouard Nicolas <brouard@ined.fr>
401:
402: * imach.c: Summary: not working
403:
404: * imach.c: Summary: Not working
405:
406: 2016-07-23 Brouard Nicolas <brouard@ined.fr>
407:
408: * imach.c: Summary: Completing for func too
409:
410: 2016-07-22 Brouard Nicolas <brouard@ined.fr>
411:
412: * imach.c: Summary: Fixing some arrays, still debugging
413:
414: 2016-07-21 Brouard Nicolas <brouard@ined.fr>
415:
416: * imach.c:
417: Summary: 0.99 working (more or less) for Asian Workshop on multitate methods
418:
419: 2016-07-12 Brouard Nicolas <brouard@ined.fr>
420:
421: * imach.c: Summary: temp
422:
423: * imach.c: Summary: saving but not running
424:
425: 2016-07-01 Brouard Nicolas <brouard@ined.fr>
426:
427: * imach.c: Summary: Fixes
428:
429: 2016-02-19 Brouard Nicolas <brouard@ined.fr>
430:
431: * imach-0.98r.c: Summary: Kind of 0.98r? series, starting with r7
432:
433: * setup.iss, Makefile, version.h: *** empty log message ***
434:
435: * imach.c: Summary: temporary
436:
437: 2016-02-17 Brouard Nicolas <brouard@ined.fr>
438:
439: * imach.c: Summary: Probably last 0.98 stable version 0.98r6
440:
441: 2016-02-16 Brouard Nicolas <brouard@ined.fr>
442:
443: * imach.c: Summary: minor bug
444:
445: * imach.c: Summary: 0.99r2
446:
447: 2016-02-15 Brouard Nicolas <brouard@ined.fr>
448:
449: * imach.c: *** empty log message ***
450:
451: 2016-02-12 Brouard Nicolas <brouard@ined.fr>
452:
453: * imach.c: Summary: 0.99 Back projections
454:
455: 2015-12-23 Brouard Nicolas <brouard@ined.fr>
456:
457: * imach.c: Summary: Experimental backcast
458:
459: 2015-12-18 Brouard Nicolas <brouard@ined.fr>
460:
461: * imach.c: Summary: 0.98r4 Warning and status=-2
462:
463: Version 0.98r4 is now:
464: - displaying an error when status is -1, date of interview unknown and date of death known;
465: - permitting a status -2 when the vital status is unknown at a known date of right truncation.
466: Older changes concerning s=-2, dating from 2005 have been supersed.
467:
468: * Makefile: *** empty log message ***
469:
470: 2015-12-16 Brouard Nicolas <brouard@ined.fr>
471:
472: * Makefile: *** empty log message ***
473:
474: * imach.c: Summary: 0.98r4 working
475:
476: * Makefile: Summary: linuxrpm added
477:
478: * Makefile: *** empty log message ***
479:
480: * imach.c: Summary: temporary not working
481:
482: 2015-12-11 Brouard Nicolas <brouard@ined.fr>
483:
484: * imach.c: Summary: 0.98r4
485:
486: 2015-12-08 Brouard Nicolas <brouard@ined.fr>
487:
488: * Makefile: *** empty log message ***
489:
490: 2015-11-21 Brouard Nicolas <brouard@ined.fr>
491:
492: * Makefile:
493: Summary: VBoxManage change from execute --image to run --exe and --wait-exit doesn't exist any more
494:
495: * imach.c: Summary: minor typo
496:
497: * imach.c: Summary: 0.98r3 with some graph of projected cross-sectional
498:
499: Author: Nicolas Brouard
500:
501: 2015-11-18 Brouard Nicolas <brouard@ined.fr>
502:
503: * imach.c: Summary: Start working on projected prevalences
504:
505: 2015-11-17 Brouard Nicolas <brouard@ined.fr>
506:
507: * imach.c: Summary: Adding ftolpl parameter
508: Author: N Brouard
509:
510: We had difficulties to get smoothed confidence intervals. It was due
511: to the period prevalence which wasn't computed accurately. The inner
512: parameter ftolpl is now an outer parameter of the .imach parameter
513: file after estepm. If ftolpl is small 1.e-4 and estepm too,
514: computation are long.
515:
516: * version.h: *** empty log message ***
517:
518: * imach.c: Summary: temporary
519:
520: 2015-10-27 Brouard Nicolas <brouard@ined.fr>
521:
522: * Makefile: *** empty log message ***
523:
524: * setup.iss.in: Summary: some new subdirs
525:
526: * imach.c: *** empty log message ***
527:
528: * setup.iss.in:
529: Summary: Adding gnuplot 5.1 with bin and etc for pango fonts
530:
531: 2015-10-24 Brouard Nicolas <brouard@ined.fr>
532:
533: * imach.c: *** empty log message ***
534:
535: 2015-10-23 Brouard Nicolas <brouard@ined.fr>
536:
537: * imach.c:
538: Summary: 0.98r3 some clarification for graphs on likelihood contributions
539:
540: 2015-10-01 Brouard Nicolas <brouard@ined.fr>
541:
542: * imach.c: Summary: Some new graphs of contribution to likelihood
543:
544: 2015-09-30 Brouard Nicolas <brouard@ined.fr>
545:
546: * Makefile:
547: Summary: Version read from version.h, itself read with cmake
548:
549: * imach.c: Summary: looking at better estimation of the hessian
550:
551: Also a better criteria for convergence to the period prevalence And
552: therefore adding the number of years needed to converge. (The
553: prevalence in any alive state shold sum to one
554:
555: * Makefile: *** empty log message ***
556:
557: 2015-09-22 Brouard Nicolas <brouard@ined.fr>
558:
559: * imach.c:
560: Summary: Adding some overall graph on contribution to likelihood. Might change
561:
562: 2015-09-15 Brouard Nicolas <brouard@ined.fr>
563:
564: * Makefile: *** empty log message ***
565:
566: * imach.c: Summary: 0.98r0
567:
568: - Some new graphs like survival functions
569: - Some bugs fixed like model=1+age+V2.
570:
571: * ChangeLog, Makefile: Summary: 0.98r0
572:
573: * CMakeLists.txt: Summary: Some tests for setup.iss
574:
575: 2015-09-15 Nicolas J Brouard <nbrouard@tugault.ined.fr>
576:
577: * (Module): 0.98r0 Some new graphs, some bugs fixed: model=1+age+V2. etc
578:
579: 2015-08-18 Nicolas J Brouard <nbrouard@tugault.local>
580:
581: * (Module): Adding error when the covariance matrix doesn't contain the exact number of lines required by the model line.
582:
583: 2015-08-03 Nicolas J Brouard <nbrouard@tugault.ined.fr>
584:
585: * (Module): Changing Variance of one-step probabilities into Standard deviation (thanks to Yao-Chi Shih)
586:
587: 2014-12-16 Nicolas J Brouard <nbrouard@tugault.local>
588:
589: * imach.c (Module): Merging 1.61 to 1.162
590:
591: 2014-09-02 Nicolas J Brouard <nbrouard@njbrouard.ined.fr>
592:
593: * prevlim.h (Module):
594:
595: 2014-01-26 Nicolas J Brouard <nbrouard@ledermann-2.local>
596:
597: * imach.c (Module): Trying to merge old staffs together while being at Tokyo. Not tested...
598: (Module): Version 0.98nR Running ok, but output format still only works for three covariates.
599:
600: 2010-04-29 brouard <brouard@ined.fr>
601:
602: * imach.c (Module): Checking covariates for more complex models
603: than V1+V2. A lot of change to be done. Unstable.
604:
605: 2010-04-26 brouard <brouard@ined.fr>
606:
607: * imach.c (Module): merging some libgsl code. Fixing computation
608: of likelione (using inter/intrapolation if mle = 0) in order to
609: get same likelihood as if mle=1.
610: Some cleaning of code and comments added.
611:
612: 2009-10-29 brouard <brouard@ined.fr>
613:
614: * imach.c (Module): Now imach stops if date of birth, at least year of birth, is not given. Some cleaning of the code.
615:
616: 2006-06-30 Brouard Nicolas <brouard@localhost>
617:
618: * imach.c (Module): Clarifications on computing e.j
619:
620: 2006-04-28 Brouard Nicolas <brouard@localhost>
621:
622: * imach.c (Module): Yes the sum of survivors was wrong since
623: imach-114 because nhstepm was no more computed in the age
624: loop. Now we define nhstepma in the age loop.
625: (Module): In order to speed up (in case of numerous covariates) we
626: compute health expectancies (without variances) in a first step
627: and then all the health expectancies with variances or standard
628: deviation (needs data from the Hessian matrices) which slows the
629: computation.
630: In the future we should be able to stop the program is only health
631: expectancies and graph are needed without standard deviations.
632:
633: 2006-04-04 LIEVRE Agnes <lievre@PC_00697.ined.fr>
634:
635: * imach.iss (Module):
636:
637: * imach.c (Module): bugs in evsi + population file added in htm output file
638:
639: 2006-03-22 LIEVRE Agnes <lievre@PC_00697.ined.fr>
640:
641: * imach.c (Module):
642:
643: 2006-03-20 Brouard Nicolas <brouard@localhost>
644:
645: * imach.c (Module): <title> changed, corresponds to .htm file
646: name. <head> headers where missing.
647:
648: * Makefile (Module): 0.98g
649:
650: * imach.c (Module): Weights can have a decimal point as for
651: English (a comma might work with a correct LC_NUMERIC environment,
652: otherwise the weight is truncated).
653: Modification of warning when the covariates values are not 0 or
654: 1.
655: Version 0.98g
656:
657: 2006-03-16 LIEVRE Agnes <lievre@PC_00697.ined.fr>
658:
659: * imach.c (Module): Comments concerning covariates added
660:
661: * noreg-setup.iss (Module): Version 0.98f
662:
663: * Makefile (Module): Version 0.98f make _windows=1 imachcyg-setup
664:
665: * imach.c (Module): refinements in the computation of lli if
666: status=-2 in order to have more reliable computation if stepm is
667: not 1 month. Version 0.98f
668:
669: 2006-03-15 Brouard Nicolas <brouard@localhost>
670:
671: * imach.c (Module): Bug if status = -2, the loglikelihood was
672: computed as likelihood omitting the logarithm. Version O.98e
673:
674: 2006-03-14 Brouard Nicolas <brouard@localhost>
675:
676: * imach.c (Module): varevsij Comments added explaining the second
677: table of variances if popbased=1 .
678: (Module): Covariances of eij, ekl added, graphs fixed, new html link.
679: (Module): Function pstamp added
680: (Module): Version 0.98d
681:
682: 2006-03-06 Brouard Nicolas <brouard@localhost>
683:
684: * imach.c (Module): Variance-covariance wrong links and
685: varian-covariance of ej. is needed (Saito).
686:
687: 2006-02-27 Brouard Nicolas <brouard@localhost>
688:
689: * imach.c (Module): One freematrix added in mlikeli!
690:
691: 2006-02-26 Brouard Nicolas <brouard@localhost>
692:
693: * imach.c (Module): Some improvements in processing parameter
694: filename with strsep.
695:
696: 2006-02-24 Brouard Nicolas <brouard@localhost>
697:
698: * imach.c (Module): Memory leaks checks with valgrind and:
699: datafile was not closed, some imatrix were not freed and on matrix
700: allocation too.
701:
702: 2006-02-09 LIEVRE Agnes <lievre@PC_00697.ined.fr>
703:
704: * strsep.c (Module): Inclusion because not in mingw32!!!
705:
706: * setup.iss.in (Module): IMACHSETUPVERSION added
707:
708: * noreg-setup.iss (Module): added to cvs tree
709:
710: * Makefile (Module): IMACHSETUPVERSION added
711:
712: 2006-01-30 BROUARD Nicolas <brouard@localhost>
713:
714: * Makefile (Module, Module): Latest Makefile
715:
716: * imach.c (Module): Back to gnuplot.exe instead of wgnuplot.exe
717:
718: 2006-01-27 BROUARD Nicolas <brouard@localhost>
719:
720: * noreg-setup.iss (Module): ADDED
721:
722: 2006-01-24 BROUARD Nicolas <brouard@localhost>
723:
724: * imach.c (Module): Comments (lines starting with a #) are allowed in data.
725:
726: 2005-10-25 Nicolas Brouard <brouard@dhcp171.recherche.ined.fr>
727:
728: * Makefile (Module): Added Imach98.pmsp and howto crete a dmg
729:
730: * createdmg.sh (Module): Creates a dmg disk for MaC OS/X
731:
732: 2005-09-30 <lievre@PC_00595>
733:
734: * imach.c (Module): sump fixed, loop imx fixed, and simplifications.
735: (Module): If the status is missing at the last wave but we know
736: that the person is alive, then we can code his/her status as -2
737: (instead of missing=-1 in earlier versions) and his/her
738: contributions to the likelihood is 1 - Prob of dying from last
739: health status (= 1-p13= p11+p12 in the easiest case of somebody in
740: the healthy state at last known wave). Version is 0.98
741:
742: 2004-05-20 Brouard Nicolas <brouard@localhost>
743:
744: * imach.c (Repository):
745: Agnes added a direct estimation of mortality (without the need of
746: computing period prevalence and differential mortality). Thus here
747: is version 0.97a which has been distributed to some people at
748: REVES 16 in Brugge using an Inno setup.exe for PCs. Estimates of
749: mortality using covariates is not done today. Estimating direct
750: mortality is a very different process because it doesn't need
751: interpolation because it is easy to get the lx from the force of
752: the mortality mux in the simplest case as for a Gompertz (log mux
753: = a + b*x . But we have been able to incorporate the new code
754: within former imach program (0.96d) without deteriorating too much
755: the understanding of the program.
756:
757: 2003-06-25 <brouard@BROUARD>
758:
759: * imach.c (Module): On windows (cygwin) function asctime_r doesn't
760: exist so I changed back to asctime which exists.
761: (Module): Version 0.96b
762:
763: 2003-06-24 <brouard@BROUARD>
764:
765: * imach.c (Module): Some bugs corrected for windows. Also, when
766: mle=-1 a template is output in file "or"mypar.txt with the design
767: of the covariance matrix to be input.
768:
769: 2003-06-25 Brouard Nicolas <brouard@homebrou>
770:
771: * imach.c (Repository): Duplicated warning errors corrected.
772: (Repository): Elapsed time after each iteration is now output. It
773: helps to forecast when convergence will be reached. Elapsed time
774: is stamped in powell. We created a new html file for the graphs
775: concerning matrix of covariance. It has extension -cov.htm.
776:
777: 2003-06-23 Brouard Nicolas <brouard@homebrou>
778:
779: * imach.c (Repository): Create a sub-directory where all the secondary files are. Only imach, htm, gp and r(imach) are on the main directory. Correct time and other things.
780:
781: 2003-06-18 Brouard Nicolas <brouard@homebrou>
782:
783: * imach.c (Repository): Suppress abusive calls to append to file html (solution was to put fichtm as a global variable. Version 0.96
784:
785: 2003-06-17 Brouard Nicolas <brouard@homebrou>
786:
787:
788: * imach.c (Repository): Check when date of death was earlier that
789: current date of interview. It may happen when the death was just
790: prior to the death. In this case, dh was negative and likelihood
791: was wrong (infinity). We still send an "Error" but patch by
792: assuming that the date of death was just one stepm after the
793: interview.
794: (Repository): Because some people have very long ID (first column)
795: we changed int to long in num[] and we added a new lvector for
796: memory allocation. But we also truncated to 8 characters (left
797: truncation)
798:
799: (Repository): No more line truncation errors.
800:
801: 2003-06-14 Brouard Nicolas <brouard@homebrou>
802:
803: * imach.c (Repository): Add of a routine likelione (likelihood
804: only once) which prints on a text file
805: (ilk) the contributions to the likelihood for each
806: individual/wave.
807:
808: 2003-06-13 Brouard Nicolas <brouard@homebrou>
809: * imach.c (Repository): Replace "freqsummary" at a correct
810: place. It differs from routine "prevalence" which may be called
811: many times. Probs is memory consuming and must be used with
812: parcimony.
813:
814: 2003-06-17 <brouard@BROUARD>
815:
816: * timeval.h (Module): Added included file to make use of
817: gettimeofday working on win32 with cygwin.
818:
819: 2003-05-16 Brouard Nicolas <brouard@brouard>
820: * imach.c (Module): Insert of a warning if the delay between two
821: waves is negative.
822:
823: * imach.c (Module):
824:
825: 2003-05-03 <brouard@BROUARD>
826:
827: * imach.c: Some cleaning
828:
829: 2003-03-28 <brouard@BROUARD>
830: * imach.c (Module): In version up to 0.92 likelihood was computed
831: as if date of death was unknown. Death was treated as any other
832: health state: the date of the interview describes the actual state
833: and not the date of a change in health state. The former idea was
834: to consider that at each interview the state was recorded
835: (healthy, disable or death) and IMaCh was corrected; but when we
836: introduced the exact date of death then we should have modified
837: the contribution of an exact death to the likelihood. This new
838: contribution is smaller and very dependent of the step unit
839: stepm. It is no more the probability to die between last interview
840: and month of death but the probability to survive from last
841: interview up to one month before death multiplied by the
842: probability to die within a month. Thanks to Chris
843: Jackson for correcting this bug. Former versions increased
844: mortality artificially. The bad side is that we add another loop
845: which slows down the processing. The difference can be up to 10%
846: lower mortality.
847:
848: 2002-05-30 <brouard@BROUARD>
1.57 brouard 849:
1.55 brouard 850: * imach.c (Module): Add correlation matrix of one-step
851: probabilities and covariance matrix
1.54 brouard 852:
FreeBSD-CVSweb <freebsd-cvsweb@FreeBSD.org>
![[BACK]](/icons/small/back.gif){kind=icon}
Return to ChangeLog CVS log ![[TXT]](/icons/small/text.gif){kind=icon}
![[DIR]](/icons/small/dir.gif){kind=icon}
Up to [Local Repository] / imach / src