version 1.236, 2016/08/25 10:50:18
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version 1.237, 2016/08/26 09:20:19
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/* $Id$ |
/* $Id$ |
$State$ |
$State$ |
$Log$ |
$Log$ |
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Revision 1.237 2016/08/26 09:20:19 brouard |
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Summary: to valgrind |
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Revision 1.236 2016/08/25 10:50:18 brouard |
Revision 1.236 2016/08/25 10:50:18 brouard |
*** empty log message *** |
*** empty log message *** |
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Line 1114 int *TvarsQind;
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Line 1117 int *TvarsQind;
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#define MAXRESULTLINES 10 |
#define MAXRESULTLINES 10 |
int nresult=0; |
int nresult=0; |
int TKresult[MAXRESULTLINES]; |
int TKresult[MAXRESULTLINES]; |
double Tresult[MAXRESULTLINES][NCOVMAX];/* For dummy variable , value (output) */ |
int Tresult[MAXRESULTLINES][NCOVMAX];/* For dummy variable , value (output) */ |
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int Tinvresult[MAXRESULTLINES][NCOVMAX];/* For dummy variable , value (output) */ |
int Tvresult[MAXRESULTLINES][NCOVMAX]; /* For dummy variable , variable # (output) */ |
int Tvresult[MAXRESULTLINES][NCOVMAX]; /* For dummy variable , variable # (output) */ |
double Tqresult[MAXRESULTLINES][NCOVMAX]; /* For quantitative variable , value (output) */ |
double Tqresult[MAXRESULTLINES][NCOVMAX]; /* For quantitative variable , value (output) */ |
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double Tqinvresult[MAXRESULTLINES][NCOVMAX]; /* For quantitative variable , value (output) */ |
int Tvqresult[MAXRESULTLINES][NCOVMAX]; /* For quantitative variable , variable # (output) */ |
int Tvqresult[MAXRESULTLINES][NCOVMAX]; /* For quantitative variable , variable # (output) */ |
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/* int *TDvar; /\**< TDvar[1]=4, TDvarF[2]=3, TDvar[3]=6 in V5+V4+V3+V4*V3+V5*age+V2+V1*V2+V1*age+V1 *\/ */ |
/* int *TDvar; /\**< TDvar[1]=4, TDvarF[2]=3, TDvar[3]=6 in V5+V4+V3+V4*V3+V5*age+V2+V1*V2+V1*age+V1 *\/ */ |
Line 2410 void powell(double p[], double **xi, int
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Line 2415 void powell(double p[], double **xi, int
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cov[2+nagesqr+TvarsQind[k]]=Tqresult[nres][k]; |
cov[2+nagesqr+TvarsQind[k]]=Tqresult[nres][k]; |
/* printf("prevalim Quantitative k=%d TvarsQind[%d]=%d, TvarsQ[%d]=V%d,Tqresult[%d][%d]=%f\n",k,k,TvarsQind[k],k,TvarsQ[k],nres,k,Tqresult[nres][k]); */ |
/* printf("prevalim Quantitative k=%d TvarsQind[%d]=%d, TvarsQ[%d]=V%d,Tqresult[%d][%d]=%f\n",k,k,TvarsQind[k],k,TvarsQ[k],nres,k,Tqresult[nres][k]); */ |
} |
} |
for (k=1; k<=cptcovage;k++){ |
for (k=1; k<=cptcovage;k++){ /* For product with age */ |
if(Dummy[Tvar[Tage[k]]]){ |
if(Dummy[Tvar[Tage[k]]]){ |
cov[2+nagesqr+Tage[k]]=nbcode[Tvar[Tage[k]]][codtabm(ij,k)]*cov[2]; |
cov[2+nagesqr+Tage[k]]=nbcode[Tvar[Tage[k]]][codtabm(ij,k)]*cov[2]; |
} else{ |
} else{ |
Line 2418 void powell(double p[], double **xi, int
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Line 2423 void powell(double p[], double **xi, int
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} |
} |
/* printf("prevalim Age combi=%d k=%d Tage[%d]=V%d Tqresult[%d][%d]=%f\n",ij,k,k,Tage[k],nres,k,Tqresult[nres][k]); */ |
/* printf("prevalim Age combi=%d k=%d Tage[%d]=V%d Tqresult[%d][%d]=%f\n",ij,k,k,Tage[k],nres,k,Tqresult[nres][k]); */ |
} |
} |
for (k=1; k<=cptcovprod;k++){ /* */ |
for (k=1; k<=cptcovprod;k++){ /* For product without age */ |
/* printf("prevalim Prod ij=%d k=%d Tprod[%d]=%d Tvard[%d][1]=V%d, Tvard[%d][2]=V%d\n",ij,k,k,Tprod[k], k,Tvard[k][1], k,Tvard[k][2]); */ |
/* printf("prevalim Prod ij=%d k=%d Tprod[%d]=%d Tvard[%d][1]=V%d, Tvard[%d][2]=V%d\n",ij,k,k,Tprod[k], k,Tvard[k][1], k,Tvard[k][2]); */ |
cov[2+nagesqr+Tprod[k]]=nbcode[Tvard[k][1]][codtabm(ij,k)] * nbcode[Tvard[k][2]][codtabm(ij,k)]; |
if(Dummy[Tvard[k][1]==0]){ |
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if(Dummy[Tvard[k][2]==0]){ |
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cov[2+nagesqr+Tprod[k]]=nbcode[Tvard[k][1]][codtabm(ij,k)] * nbcode[Tvard[k][2]][codtabm(ij,k)]; |
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}else{ |
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cov[2+nagesqr+Tprod[k]]=nbcode[Tvard[k][1]][codtabm(ij,k)] * Tqresult[nres][k]; |
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} |
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}else{ |
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if(Dummy[Tvard[k][2]==0]){ |
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cov[2+nagesqr+Tprod[k]]=nbcode[Tvard[k][2]][codtabm(ij,k)] * Tqinvresult[nres][Tvard[k][1]]; |
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}else{ |
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cov[2+nagesqr+Tprod[k]]=Tqinvresult[nres][Tvard[k][1]]* Tqinvresult[nres][Tvard[k][2]]; |
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} |
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} |
} |
} |
/*printf("ij=%d cptcovprod=%d tvar=%d ", ij, cptcovprod, Tvar[1]);*/ |
/*printf("ij=%d cptcovprod=%d tvar=%d ", ij, cptcovprod, Tvar[1]);*/ |
/*printf("ij=%d cov[3]=%lf cov[4]=%lf \n",ij, cov[3],cov[4]);*/ |
/*printf("ij=%d cov[3]=%lf cov[4]=%lf \n",ij, cov[3],cov[4]);*/ |
Line 4087 void freqsummary(char fileres[], int ia
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Line 4104 void freqsummary(char fileres[], int ia
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Title=%s <br>Datafile=%s Firstpass=%d Lastpass=%d Stepm=%d Weight=%d Model=1+age+%s<br>\n",\ |
Title=%s <br>Datafile=%s Firstpass=%d Lastpass=%d Stepm=%d Weight=%d Model=1+age+%s<br>\n",\ |
fileresphtm,version,fullversion,title,datafile,firstpass,lastpass,stepm, weightopt, model); |
fileresphtm,version,fullversion,title,datafile,firstpass,lastpass,stepm, weightopt, model); |
} |
} |
fprintf(ficresphtm,"Current page is file <a href=\"%s\">%s</a><br>\n\n<h4>Frequencies and prevalence by age at begin of transition</h4>\n",fileresphtm, fileresphtm); |
fprintf(ficresphtm,"Current page is file <a href=\"%s\">%s</a><br>\n\n<h4>Frequencies and prevalence by age at begin of transition and dummy covariate value at beginning of transition</h4>\n",fileresphtm, fileresphtm); |
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strcpy(fileresphtmfr,subdirfext(optionfilefiname,"PHTMFR_",".htm")); |
strcpy(fileresphtmfr,subdirfext(optionfilefiname,"PHTMFR_",".htm")); |
if((ficresphtmfr=fopen(fileresphtmfr,"w"))==NULL) { |
if((ficresphtmfr=fopen(fileresphtmfr,"w"))==NULL) { |
Line 5986 void printinghtml(char fileresu[], char
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Line 6003 void printinghtml(char fileresu[], char
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int popforecast, int prevfcast, int backcast, int estepm , \ |
int popforecast, int prevfcast, int backcast, int estepm , \ |
double jprev1, double mprev1,double anprev1, double dateprev1, \ |
double jprev1, double mprev1,double anprev1, double dateprev1, \ |
double jprev2, double mprev2,double anprev2, double dateprev2){ |
double jprev2, double mprev2,double anprev2, double dateprev2){ |
int jj1, k1, i1, cpt; |
int jj1, k1, i1, cpt, k4, nres; |
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fprintf(fichtm,"<ul><li><a href='#firstorder'>Result files (first order: no variance)</a>\n \ |
fprintf(fichtm,"<ul><li><a href='#firstorder'>Result files (first order: no variance)</a>\n \ |
<li><a href='#secondorder'>Result files (second order (variance)</a>\n \ |
<li><a href='#secondorder'>Result files (second order (variance)</a>\n \ |
</ul>"); |
</ul>"); |
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fprintf(fichtm,"<ul><li> model=1+age+%s\n \ |
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</ul>", model); |
fprintf(fichtm,"<ul><li><h4><a name='firstorder'>Result files (first order: no variance)</a></h4>\n"); |
fprintf(fichtm,"<ul><li><h4><a name='firstorder'>Result files (first order: no variance)</a></h4>\n"); |
fprintf(fichtm,"<li>- Observed frequency between two states (during the period defined between %.lf/%.lf/%.lf and %.lf/%.lf/%.lf): <a href=\"%s\">%s</a> (html file)<br/>\n", |
fprintf(fichtm,"<li>- Observed frequency between two states (during the period defined between %.lf/%.lf/%.lf and %.lf/%.lf/%.lf): <a href=\"%s\">%s</a> (html file)<br/>\n", |
jprev1, mprev1,anprev1,jprev2, mprev2,anprev2,subdirfext3(optionfilefiname,"PHTMFR_",".htm"),subdirfext3(optionfilefiname,"PHTMFR_",".htm")); |
jprev1, mprev1,anprev1,jprev2, mprev2,anprev2,subdirfext3(optionfilefiname,"PHTMFR_",".htm"),subdirfext3(optionfilefiname,"PHTMFR_",".htm")); |
Line 6025 void printinghtml(char fileresu[], char
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Line 6044 void printinghtml(char fileresu[], char
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if (cptcovn < 1) {m=1;ncodemax[1]=1;} |
if (cptcovn < 1) {m=1;ncodemax[1]=1;} |
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jj1=0; |
jj1=0; |
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for(nres=1; nres <= nresult; nres++) /* For each resultline */ |
for(k1=1; k1<=m;k1++){ |
for(k1=1; k1<=m;k1++){ |
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if(TKresult[nres]!= k1) |
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continue; |
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/* for(i1=1; i1<=ncodemax[k1];i1++){ */ |
/* for(i1=1; i1<=ncodemax[k1];i1++){ */ |
jj1++; |
jj1++; |
if (cptcovn > 0) { |
if (cptcovn > 0) { |
fprintf(fichtm,"<hr size=\"2\" color=\"#EC5E5E\">************ Results for covariates"); |
fprintf(fichtm,"<hr size=\"2\" color=\"#EC5E5E\">************ Results for covariates"); |
for (cpt=1; cpt<=cptcoveff;cpt++){ |
for (cpt=1; cpt<=cptcoveff;cpt++){ |
fprintf(fichtm," V%d=%d ",Tvaraff[cpt],nbcode[Tvaraff[cpt]][codtabm(jj1,cpt)]); |
fprintf(fichtm," V%d=%d ",Tvresult[nres][cpt],(int)Tresult[nres][cpt]); |
printf(" V%d=%d ",Tvaraff[cpt],nbcode[Tvaraff[cpt]][codtabm(jj1,cpt)]);fflush(stdout); |
printf(" V%d=%d ",Tvresult[nres][cpt],Tresult[nres][cpt]);fflush(stdout); |
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/* fprintf(fichtm," V%d=%d ",Tvaraff[cpt],nbcode[Tvaraff[cpt]][codtabm(jj1,cpt)]); */ |
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/* printf(" V%d=%d ",Tvaraff[cpt],nbcode[Tvaraff[cpt]][codtabm(jj1,cpt)]);fflush(stdout); */ |
} |
} |
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for (k4=1; k4<= nsq; k4++){ /* For each selected (single) quantitative value */ |
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fprintf(fichtm," V%d=%f ",Tvqresult[nres][k4],Tqresult[nres][k4]); |
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printf(" V%d=%f ",Tvqresult[nres][k4],Tqresult[nres][k4]);fflush(stdout); |
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} |
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/* if(nqfveff+nqtveff 0) */ /* Test to be done */ |
/* if(nqfveff+nqtveff 0) */ /* Test to be done */ |
fprintf(fichtm," ************\n<hr size=\"2\" color=\"#EC5E5E\">"); |
fprintf(fichtm," ************\n<hr size=\"2\" color=\"#EC5E5E\">"); |
if(invalidvarcomb[k1]){ |
if(invalidvarcomb[k1]){ |
Line 6146 See page 'Matrix of variance-covariance
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Line 6176 See page 'Matrix of variance-covariance
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if (cptcovn < 1) {m=1;ncodemax[1]=1;} |
if (cptcovn < 1) {m=1;ncodemax[1]=1;} |
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jj1=0; |
jj1=0; |
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for(nres=1; nres <= nresult; nres++) /* For each resultline */ |
for(k1=1; k1<=m;k1++){ |
for(k1=1; k1<=m;k1++){ |
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if(TKresult[nres]!= k1) |
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continue; |
/* for(i1=1; i1<=ncodemax[k1];i1++){ */ |
/* for(i1=1; i1<=ncodemax[k1];i1++){ */ |
jj1++; |
jj1++; |
if (cptcovn > 0) { |
if (cptcovn > 0) { |
fprintf(fichtm,"<hr size=\"2\" color=\"#EC5E5E\">************ Results for covariates"); |
fprintf(fichtm,"<hr size=\"2\" color=\"#EC5E5E\">************ Results for covariates"); |
for (cpt=1; cpt<=cptcoveff;cpt++) /**< cptcoveff number of variables */ |
for (cpt=1; cpt<=cptcoveff;cpt++) /**< cptcoveff number of variables */ |
fprintf(fichtm," V%d=%d ",Tvaraff[cpt],nbcode[Tvaraff[cpt]][codtabm(jj1,cpt)]); |
fprintf(fichtm," V%d=%d ",Tvresult[nres][cpt],Tresult[nres][cpt]); |
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/* fprintf(fichtm," V%d=%d ",Tvaraff[cpt],nbcode[Tvaraff[cpt]][codtabm(jj1,cpt)]); */ |
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for (k4=1; k4<= nsq; k4++){ /* For each selected (single) quantitative value */ |
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fprintf(fichtm," V%d=%f ",Tvqresult[nres][k4],Tqresult[nres][k4]); |
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} |
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fprintf(fichtm," ************\n<hr size=\"2\" color=\"#EC5E5E\">"); |
fprintf(fichtm," ************\n<hr size=\"2\" color=\"#EC5E5E\">"); |
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if(invalidvarcomb[k1]){ |
if(invalidvarcomb[k1]){ |
Line 6182 void printinggnuplot(char fileresu[], ch
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Line 6221 void printinggnuplot(char fileresu[], ch
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char dirfileres[132],optfileres[132]; |
char dirfileres[132],optfileres[132]; |
char gplotcondition[132]; |
char gplotcondition[132]; |
int cpt=0,k1=0,i=0,k=0,j=0,jk=0,k2=0,k3=0,k4=0,ij=0,l=0; |
int cpt=0,k1=0,i=0,k=0,j=0,jk=0,k2=0,k3=0,k4=0,ij=0, ijp=0, l=0; |
int lv=0, vlv=0, kl=0; |
int lv=0, vlv=0, kl=0; |
int ng=0; |
int ng=0; |
int vpopbased; |
int vpopbased; |
Line 6382 plot [%.f:%.f] \"%s\" every :::%d::%d u
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Line 6421 plot [%.f:%.f] \"%s\" every :::%d::%d u
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for (cpt=1; cpt<= nlstate ; cpt ++) { |
for (cpt=1; cpt<= nlstate ; cpt ++) { |
fprintf(ficgp,"\n# 3d: Life expectancy with EXP_ files: combination=%d state=%d",k1, cpt); |
fprintf(ficgp,"\n# 3d: Life expectancy with EXP_ files: combination=%d state=%d",k1, cpt); |
for (k=1; k<=cptcoveff; k++){ /* For each covariate and each value */ |
for (k=1; k<=cptcoveff; k++){ /* For each covariate dummy combination and each value */ |
lv= decodtabm(k1,k,cptcoveff); /* Should be the covariate number corresponding to k1 combination */ |
lv= decodtabm(k1,k,cptcoveff); /* Should be the covariate number corresponding to k1 combination */ |
/* decodtabm(1,1,4) = 1 because h=1 k= (1) 1 1 1 */ |
/* decodtabm(1,1,4) = 1 because h=1 k= (1) 1 1 1 */ |
/* decodtabm(1,2,4) = 1 because h=1 k= 1 (1) 1 1 */ |
/* decodtabm(1,2,4) = 1 because h=1 k= 1 (1) 1 1 */ |
Line 6390 plot [%.f:%.f] \"%s\" every :::%d::%d u
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Line 6429 plot [%.f:%.f] \"%s\" every :::%d::%d u
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vlv= nbcode[Tvaraff[k]][lv]; |
vlv= nbcode[Tvaraff[k]][lv]; |
fprintf(ficgp," V%d=%d ",Tvaraff[k],vlv); |
fprintf(ficgp," V%d=%d ",Tvaraff[k],vlv); |
} |
} |
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/* for(k=1; k <= ncovds; k++){ */ |
for (k4=1; k4<= nsq; k4++){ /* For each selected (single) quantitative value */ |
for (k4=1; k4<= nsq; k4++){ /* For each selected (single) quantitative value */ |
fprintf(ficgp," V%d=%f ",Tvqresult[nres][k4],Tqresult[nres][k4]); |
fprintf(ficgp," V%d=%f ",Tvqresult[nres][k4],Tqresult[nres][k4]); |
} |
} |
Line 6423 plot [%.f:%.f] \"%s\" every :::%d::%d u
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Line 6463 plot [%.f:%.f] \"%s\" every :::%d::%d u
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/* 4eme */ |
/* 4eme */ |
/* Survival functions (period) from state i in state j by initial state i */ |
/* Survival functions (period) from state i in state j by initial state i */ |
for (k=1; k<=cptcoveff; k++){ /* For each covariate and each value */ |
for (k1=1; k1<= m ; k1 ++) /* For each covariate combination if any */ |
for(nres=1; nres <= nresult; nres++) /* For each resultline */ |
for(nres=1; nres <= nresult; nres++){ /* For each resultline */ |
if(TKresult[nres]!= k) |
if(TKresult[nres]!= k1) |
continue; |
continue; |
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for (cpt=1; cpt<=nlstate ; cpt ++) { /* For each life state */ |
for (cpt=1; cpt<=nlstate ; cpt ++) { /* For each life state */ |
fprintf(ficgp,"\n#\n#\n# Survival functions in state j : 'LIJ_' files, cov=%d state=%d",k1, cpt); |
fprintf(ficgp,"\n#\n#\n# Survival functions in state j : 'LIJ_' files, cov=%d state=%d",k1, cpt); |
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for (k=1; k<=cptcoveff; k++){ /* For each covariate and each value */ |
lv= decodtabm(k1,k,cptcoveff); /* Should be the covariate number corresponding to k1 combination */ |
lv= decodtabm(k1,k,cptcoveff); /* Should be the covariate number corresponding to k1 combination */ |
/* decodtabm(1,1,4) = 1 because h=1 k= (1) 1 1 1 */ |
/* decodtabm(1,1,4) = 1 because h=1 k= (1) 1 1 1 */ |
/* decodtabm(1,2,4) = 1 because h=1 k= 1 (1) 1 1 */ |
/* decodtabm(1,2,4) = 1 because h=1 k= 1 (1) 1 1 */ |
Line 6526 plot [%.f:%.f] ", ageminpar, agemaxpar)
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Line 6567 plot [%.f:%.f] ", ageminpar, agemaxpar)
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/* 6eme */ |
/* 6eme */ |
/* CV preval stable (period) for each covariate */ |
/* CV preval stable (period) for each covariate */ |
for (k1=1; k1<= m ; k1 ++) { /* For each covariate combination (1 to m=2**k), if any covariate is present */ |
for (k1=1; k1<= m ; k1 ++) /* For each covariate combination if any */ |
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for(nres=1; nres <= nresult; nres++){ /* For each resultline */ |
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if(TKresult[nres]!= k1) |
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continue; |
for (cpt=1; cpt<=nlstate ; cpt ++) { /* For each life state */ |
for (cpt=1; cpt<=nlstate ; cpt ++) { /* For each life state */ |
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fprintf(ficgp,"\n#\n#\n#CV preval stable (period): 'pij' files, covariatecombination#=%d state=%d",k1, cpt); |
fprintf(ficgp,"\n#\n#\n#CV preval stable (period): 'pij' files, covariatecombination#=%d state=%d",k1, cpt); |
Line 6538 plot [%.f:%.f] ", ageminpar, agemaxpar)
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Line 6582 plot [%.f:%.f] ", ageminpar, agemaxpar)
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vlv= nbcode[Tvaraff[k]][lv]; |
vlv= nbcode[Tvaraff[k]][lv]; |
fprintf(ficgp," V%d=%d ",Tvaraff[k],vlv); |
fprintf(ficgp," V%d=%d ",Tvaraff[k],vlv); |
} |
} |
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for (k4=1; k4<= nsq; k4++){ /* For each selected (single) quantitative value */ |
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fprintf(ficgp," V%d=%f ",Tvqresult[nres][k4],Tqresult[nres][k4]); |
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} |
fprintf(ficgp,"\n#\n"); |
fprintf(ficgp,"\n#\n"); |
if(invalidvarcomb[k1]){ |
if(invalidvarcomb[k1]){ |
fprintf(ficgp,"#Combination (%d) ignored because no cases \n",k1); |
fprintf(ficgp,"#Combination (%d) ignored because no cases \n",k1); |
Line 6569 plot [%.f:%.f] ", ageminpar, agemaxpar)
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Line 6616 plot [%.f:%.f] ", ageminpar, agemaxpar)
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/* 7eme */ |
/* 7eme */ |
if(backcast == 1){ |
if(backcast == 1){ |
/* CV back preval stable (period) for each covariate */ |
/* CV back preval stable (period) for each covariate */ |
for (k1=1; k1<= m ; k1 ++) { /* For each covariate combination (1 to m=2**k), if any covariate is present */ |
for (k1=1; k1<= m ; k1 ++) /* For each covariate combination if any */ |
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for(nres=1; nres <= nresult; nres++){ /* For each resultline */ |
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if(TKresult[nres]!= k1) |
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continue; |
for (cpt=1; cpt<=nlstate ; cpt ++) { /* For each life state */ |
for (cpt=1; cpt<=nlstate ; cpt ++) { /* For each life state */ |
fprintf(ficgp,"\n#\n#\n#CV Back preval stable (period): 'pij' files, covariatecombination#=%d state=%d",k1, cpt); |
fprintf(ficgp,"\n#\n#\n#CV Back preval stable (period): 'pij' files, covariatecombination#=%d state=%d",k1, cpt); |
for (k=1; k<=cptcoveff; k++){ /* For each covariate and each value */ |
for (k=1; k<=cptcoveff; k++){ /* For each covariate and each value */ |
Line 6580 plot [%.f:%.f] ", ageminpar, agemaxpar)
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Line 6630 plot [%.f:%.f] ", ageminpar, agemaxpar)
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vlv= nbcode[Tvaraff[k]][lv]; |
vlv= nbcode[Tvaraff[k]][lv]; |
fprintf(ficgp," V%d=%d ",Tvaraff[k],vlv); |
fprintf(ficgp," V%d=%d ",Tvaraff[k],vlv); |
} |
} |
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for (k4=1; k4<= nsq; k4++){ /* For each selected (single) quantitative value */ |
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fprintf(ficgp," V%d=%f ",Tvqresult[nres][k4],Tqresult[nres][k4]); |
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} |
fprintf(ficgp,"\n#\n"); |
fprintf(ficgp,"\n#\n"); |
if(invalidvarcomb[k1]){ |
if(invalidvarcomb[k1]){ |
fprintf(ficgp,"#Combination (%d) ignored because no cases \n",k1); |
fprintf(ficgp,"#Combination (%d) ignored because no cases \n",k1); |
Line 6616 plot [%.f:%.f] ", ageminpar, agemaxpar)
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Line 6669 plot [%.f:%.f] ", ageminpar, agemaxpar)
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if(prevfcast==1){ |
if(prevfcast==1){ |
/* Projection from cross-sectional to stable (period) for each covariate */ |
/* Projection from cross-sectional to stable (period) for each covariate */ |
|
|
for (k1=1; k1<= m ; k1 ++) { /* For each covariate combination (1 to m=2**k), if any covariate is present */ |
for (k1=1; k1<= m ; k1 ++) /* For each covariate combination if any */ |
|
for(nres=1; nres <= nresult; nres++){ /* For each resultline */ |
|
if(TKresult[nres]!= k1) |
|
continue; |
for (cpt=1; cpt<=nlstate ; cpt ++) { /* For each life state */ |
for (cpt=1; cpt<=nlstate ; cpt ++) { /* For each life state */ |
fprintf(ficgp,"\n#\n#\n#Projection of prevalence to stable (period): 'PROJ_' files, covariatecombination#=%d state=%d",k1, cpt); |
fprintf(ficgp,"\n#\n#\n#Projection of prevalence to stable (period): 'PROJ_' files, covariatecombination#=%d state=%d",k1, cpt); |
for (k=1; k<=cptcoveff; k++){ /* For each correspondig covariate value */ |
for (k=1; k<=cptcoveff; k++){ /* For each correspondig covariate value */ |
Line 6627 plot [%.f:%.f] ", ageminpar, agemaxpar)
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Line 6683 plot [%.f:%.f] ", ageminpar, agemaxpar)
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vlv= nbcode[Tvaraff[k]][lv]; |
vlv= nbcode[Tvaraff[k]][lv]; |
fprintf(ficgp," V%d=%d ",Tvaraff[k],vlv); |
fprintf(ficgp," V%d=%d ",Tvaraff[k],vlv); |
} |
} |
|
for (k4=1; k4<= nsq; k4++){ /* For each selected (single) quantitative value */ |
|
fprintf(ficgp," V%d=%f ",Tvqresult[nres][k4],Tqresult[nres][k4]); |
|
} |
fprintf(ficgp,"\n#\n"); |
fprintf(ficgp,"\n#\n"); |
if(invalidvarcomb[k1]){ |
if(invalidvarcomb[k1]){ |
fprintf(ficgp,"#Combination (%d) ignored because no cases \n",k1); |
fprintf(ficgp,"#Combination (%d) ignored because no cases \n",k1); |
Line 6738 plot [%.f:%.f] ", ageminpar, agemaxpar)
|
Line 6797 plot [%.f:%.f] ", ageminpar, agemaxpar)
|
fprintf(ficgp,"# +exp(a14+b14*age+c14age*age+d14*V1+e14*V1*age)+...)\n"); |
fprintf(ficgp,"# +exp(a14+b14*age+c14age*age+d14*V1+e14*V1*age)+...)\n"); |
fprintf(ficgp,"#\n"); |
fprintf(ficgp,"#\n"); |
for(ng=1; ng<=3;ng++){ /* Number of graphics: first is logit, 2nd is probabilities, third is incidences per year*/ |
for(ng=1; ng<=3;ng++){ /* Number of graphics: first is logit, 2nd is probabilities, third is incidences per year*/ |
|
fprintf(ficgp,"#Number of graphics: first is logit, 2nd is probabilities, third is incidences per year \n"); |
|
fprintf(ficgp,"#model=%s \n",model); |
fprintf(ficgp,"# ng=%d\n",ng); |
fprintf(ficgp,"# ng=%d\n",ng); |
fprintf(ficgp,"# jk=1 to 2^%d=%d\n",cptcoveff,m); |
fprintf(ficgp,"# jk=1 to 2^%d=%d\n",cptcoveff,m);/* to be checked */ |
for(jk=1; jk <=m; jk++) { |
for(jk=1; jk <=m; jk++) /* For each combination of covariate */ |
fprintf(ficgp,"# jk=%d\n",jk); |
for(nres=1; nres <= nresult; nres++){ /* For each resultline */ |
|
if(TKresult[nres]!= jk) |
|
continue; |
|
fprintf(ficgp,"# Combination of dummy jk=%d and ",jk); |
|
for (k4=1; k4<= nsq; k4++){ /* For each selected (single) quantitative value */ |
|
fprintf(ficgp," V%d=%f ",Tvqresult[nres][k4],Tqresult[nres][k4]); |
|
} |
|
fprintf(ficgp,"\n#\n"); |
fprintf(ficgp,"\nset out \"%s_%d-%d.svg\" ",subdirf2(optionfilefiname,"PE_"),jk,ng); |
fprintf(ficgp,"\nset out \"%s_%d-%d.svg\" ",subdirf2(optionfilefiname,"PE_"),jk,ng); |
fprintf(ficgp,"\nset ter svg size 640, 480 "); |
fprintf(ficgp,"\nset ter svg size 640, 480 "); |
if (ng==1){ |
if (ng==1){ |
Line 6782 plot [%.f:%.f] ", ageminpar, agemaxpar)
|
Line 6850 plot [%.f:%.f] ", ageminpar, agemaxpar)
|
break; |
break; |
} |
} |
ij=1;/* To be checked else nbcode[0][0] wrong */ |
ij=1;/* To be checked else nbcode[0][0] wrong */ |
for(j=3; j <=ncovmodel-nagesqr; j++) { |
ijp=1; /* product no age */ |
|
/* for(j=3; j <=ncovmodel-nagesqr; j++) { */ |
|
for(j=1; j <=cptcovt; j++) { /* For each covariate of the simplified model */ |
/* printf("Tage[%d]=%d, j=%d\n", ij, Tage[ij], j); */ |
/* printf("Tage[%d]=%d, j=%d\n", ij, Tage[ij], j); */ |
if(ij <=cptcovage) { /* Bug valgrind */ |
if(j==Tage[ij]) { /* Product by age */ |
if((j-2)==Tage[ij]) { /* Bug valgrind */ |
if(ij <=cptcovage) { /* V5+V4+V3+V4*V3+V5*age+V2+V1*V2+V1*age+V1, 2 V5 and V1 */ |
fprintf(ficgp,"+p%d*%d*x",i+j+nagesqr-1,nbcode[Tvar[j-2]][codtabm(jk,j-2)]); |
if(Dummy[j]==0){ |
/* fprintf(ficgp,"+p%d*%d*x",i+j+nagesqr-1,nbcode[Tvar[j-2]][codtabm(jk,Tvar[j-2])]); */ |
fprintf(ficgp,"+p%d*%d*x",i+j+2+nagesqr-1,Tinvresult[nres][Tvar[j]]);; |
|
}else{ /* quantitative */ |
|
fprintf(ficgp,"+p%d*%f*x",i+j+2+nagesqr-1,Tqinvresult[nres][Tvar[j]]); /* Tqinvresult in decoderesult */ |
|
/* fprintf(ficgp,"+p%d*%d*x",i+j+nagesqr-1,nbcode[Tvar[j-2]][codtabm(jk,Tvar[j-2])]); */ |
|
} |
ij++; |
ij++; |
} |
} |
} |
}else if(j==Tprod[ijp]) { /* */ |
else |
/* printf("Tprod[%d]=%d, j=%d\n", ij, Tprod[ijp], j); */ |
fprintf(ficgp,"+p%d*%d",i+j+nagesqr-1,nbcode[Tvar[j-2]][codtabm(jk,j-2)]); /* Valgrind bug nbcode */ |
if(ijp <=cptcovprod) { /* Product */ |
} |
if(Dummy[Tvard[ijp][1]]==0){/* Vn is dummy */ |
|
if(Dummy[Tvard[ijp][2]]==0){/* Vn and Vm are dummy */ |
|
/* fprintf(ficgp,"+p%d*%d*%d",i+j+2+nagesqr-1,nbcode[Tvard[ijp][1]][codtabm(jk,j)],nbcode[Tvard[ijp][2]][codtabm(jk,j)]); */ |
|
fprintf(ficgp,"+p%d*%d*%d",i+j+2+nagesqr-1,Tinvresult[nres][Tvard[ijp][1]],Tinvresult[nres][Tvard[ijp][2]]); |
|
}else{ /* Vn is dummy and Vm is quanti */ |
|
/* fprintf(ficgp,"+p%d*%d*%f",i+j+2+nagesqr-1,nbcode[Tvard[ijp][1]][codtabm(jk,j)],Tqinvresult[nres][Tvard[ijp][2]]); */ |
|
fprintf(ficgp,"+p%d*%d*%f",i+j+2+nagesqr-1,Tinvresult[nres][Tvard[ijp][1]],Tqinvresult[nres][Tvard[ijp][2]]); |
|
} |
|
}else{ /* Vn*Vm Vn is quanti */ |
|
if(Dummy[Tvard[ijp][2]]==0){ |
|
fprintf(ficgp,"+p%d*%d*%f",i+j+2+nagesqr-1,Tinvresult[nres][Tvard[ijp][2]],Tqinvresult[nres][Tvard[ijp][1]]); |
|
}else{ /* Both quanti */ |
|
fprintf(ficgp,"+p%d*%f*%f",i+j+2+nagesqr-1,Tqinvresult[nres][Tvard[ijp][1]],Tqinvresult[nres][Tvard[ijp][2]]); |
|
} |
|
} |
|
} |
|
} else{ /* simple covariate */ |
|
/* fprintf(ficgp,"+p%d*%d",i+j+2+nagesqr-1,nbcode[Tvar[j]][codtabm(jk,j)]); /\* Valgrind bug nbcode *\/ */ |
|
if(Dummy[j]==0){ |
|
fprintf(ficgp,"+p%d*%d",i+j+2+nagesqr-1,Tinvresult[nres][Tvar[j]]); /* */ |
|
}else{ /* quantitative */ |
|
fprintf(ficgp,"+p%d*%f",i+j+2+nagesqr-1,Tqinvresult[nres][Tvar[j]]); /* */ |
|
/* fprintf(ficgp,"+p%d*%d*x",i+j+nagesqr-1,nbcode[Tvar[j-2]][codtabm(jk,Tvar[j-2])]); */ |
|
} |
|
} /* end simple */ |
|
} /* end j */ |
}else{ |
}else{ |
i=i-ncovmodel; |
i=i-ncovmodel; |
if(ng !=1 ) /* For logit formula of log p11 is more difficult to get */ |
if(ng !=1 ) /* For logit formula of log p11 is more difficult to get */ |
Line 6811 plot [%.f:%.f] ", ageminpar, agemaxpar)
|
Line 6910 plot [%.f:%.f] ", ageminpar, agemaxpar)
|
|
|
ij=1; |
ij=1; |
for(j=3; j <=ncovmodel-nagesqr; j++){ |
for(j=3; j <=ncovmodel-nagesqr; j++){ |
if(ij <=cptcovage) { /* Bug valgrind */ |
if((j-2)==Tage[ij]) { /* Bug valgrind */ |
if((j-2)==Tage[ij]) { /* Bug valgrind */ |
if(ij <=cptcovage) { /* Bug valgrind */ |
fprintf(ficgp,"+p%d*%d*x",k3+(k1-1)*ncovmodel+1+j-2+nagesqr,nbcode[Tvar[j-2]][codtabm(jk,j-2)]); |
fprintf(ficgp,"+p%d*%d*x",k3+(k1-1)*ncovmodel+1+j-2+nagesqr,nbcode[Tvar[j-2]][codtabm(jk,j-2)]); |
/* fprintf(ficgp,"+p%d*%d*x",k3+(k1-1)*ncovmodel+1+j-2+nagesqr,nbcode[Tvar[j-2]][codtabm(jk,Tvar[j-2])]); */ |
/* fprintf(ficgp,"+p%d*%d*x",k3+(k1-1)*ncovmodel+1+j-2+nagesqr,nbcode[Tvar[j-2]][codtabm(jk,Tvar[j-2])]); */ |
ij++; |
ij++; |
Line 8020 int decoderesult ( char resultline[], in
|
Line 8119 int decoderesult ( char resultline[], in
|
if(Typevar[k1]==0){ /* Single covariate in model */ |
if(Typevar[k1]==0){ /* Single covariate in model */ |
match=0; |
match=0; |
for(k2=1; k2 <=j;k2++){/* result line V4=1 V5=24.1 V3=1 V2=8 V1=0 */ |
for(k2=1; k2 <=j;k2++){/* result line V4=1 V5=24.1 V3=1 V2=8 V1=0 */ |
if(Tvar[k1]==Tvarsel[k2]) {/* Tvar[2]=5 == Tvarsel[1]=4 */ |
if(Tvar[k1]==Tvarsel[k2]) {/* Tvar[1]=5 == Tvarsel[2]=5 */ |
modelresult[k2]=k1;/* modelresult[2]=1 modelresult[1]=2 modelresult[3]=3 modelresult[6]=4 modelresult[9]=5 */ |
modelresult[k2]=k1;/* modelresult[2]=1 modelresult[1]=2 modelresult[3]=3 modelresult[6]=4 modelresult[9]=5 */ |
match=1; |
match=1; |
break; |
break; |
Line 8036 int decoderesult ( char resultline[], in
|
Line 8135 int decoderesult ( char resultline[], in
|
match=0; |
match=0; |
for(k1=1; k1<= cptcovt ;k1++){ /* model line V5+V4+V3+V4*V3+V5*age+V2+V1*V2+V1*age+V1 */ |
for(k1=1; k1<= cptcovt ;k1++){ /* model line V5+V4+V3+V4*V3+V5*age+V2+V1*V2+V1*age+V1 */ |
if(Typevar[k1]==0){ /* Single */ |
if(Typevar[k1]==0){ /* Single */ |
if(Tvar[k1]==Tvarsel[k2]) { /* Tvar[2]=5 == Tvarsel[1]=4 */ |
if(Tvar[k1]==Tvarsel[k2]) { /* Tvar[2]=4 == Tvarsel[1]=4 */ |
resultmodel[k1]=k2; /* resultmodel[2]=1 resultmodel[1]=2 resultmodel[3]=3 resultmodel[6]=4 resultmodel[9]=5 */ |
resultmodel[k1]=k2; /* resultmodel[2]=1 resultmodel[1]=2 resultmodel[3]=3 resultmodel[6]=4 resultmodel[9]=5 */ |
++match; |
++match; |
} |
} |
Line 8063 int decoderesult ( char resultline[], in
|
Line 8162 int decoderesult ( char resultline[], in
|
/* 6 1 0 1 */ /* V4=1, V3=0, V1=1 */ |
/* 6 1 0 1 */ /* V4=1, V3=0, V1=1 */ |
/* 7 0 1 1 */ |
/* 7 0 1 1 */ |
/* 8 1 1 1 */ |
/* 8 1 1 1 */ |
|
/* V(Tvresult)=Tresult V4=1 V3=0 V1=1 Tresult[nres=1][2]=0 */ |
|
/* V(Tvqresult)=Tqresult V5=25.1 V2=8 Tqresult[nres=1][1]=25.1 */ |
|
/* V5*age V5 known which value for nres? */ |
|
/* Tqinvresult[2]=8 Tqinvresult[1]=25.1 */ |
for(k1=1, k=0, k4=0, k4q=0; k1 <=cptcovt;k1++){ /* model line */ |
for(k1=1, k=0, k4=0, k4q=0; k1 <=cptcovt;k1++){ /* model line */ |
if( Dummy[k1]==0 && Typevar[k1]==0 ){ /* Single dummy */ |
if( Dummy[k1]==0 && Typevar[k1]==0 ){ /* Single dummy */ |
k3= resultmodel[k1]; /* resultmodel[2] = 1=k3 */ |
k3= resultmodel[k1]; /* resultmodel[2(V4)] = 1=k3 */ |
k2=(int)Tvarsel[k3]; /* Tvarsel[resultmodel[2]]= Tvarsel[1] = 4=k2 */ |
k2=(int)Tvarsel[k3]; /* Tvarsel[resultmodel[2]]= Tvarsel[1] = 4=k2 */ |
k+=Tvalsel[k3]*pow(2,k4); /* Tvalsel[1]=1 */ |
k+=Tvalsel[k3]*pow(2,k4); /* Tvalsel[1]=1 */ |
Tresult[nres][k4+1]=Tvalsel[k3]; |
Tresult[nres][k4+1]=Tvalsel[k3];/* Tresult[nres][1]=1(V4=1) Tresult[nres][2]=0(V3=0) */ |
Tvresult[nres][k4+1]=(int)Tvarsel[k3]; |
Tvresult[nres][k4+1]=(int)Tvarsel[k3];/* Tvresult[nres][1]=4 Tvresult[nres][3]=1 */ |
|
Tinvresult[nres][(int)Tvarsel[k3]]=Tvalsel[k3]; /* Tinvresult[nres][4]=1 */ |
printf("Decoderesult Dummy k=%d, V(k2=V%d)= Tvalsel[%d]=%d, 2**(%d)\n",k, k2, k3, (int)Tvalsel[k3], k4); |
printf("Decoderesult Dummy k=%d, V(k2=V%d)= Tvalsel[%d]=%d, 2**(%d)\n",k, k2, k3, (int)Tvalsel[k3], k4); |
k4++;; |
k4++;; |
} else if( Dummy[k1]==1 && Typevar[k1]==0 ){ /* Single quantitative */ |
} else if( Dummy[k1]==1 && Typevar[k1]==0 ){ /* Single quantitative */ |
k3q= resultmodel[k1]; /* resultmodel[2] = 1=k3 */ |
k3q= resultmodel[k1]; /* resultmodel[2] = 1=k3 */ |
k2q=(int)Tvarsel[k3q]; /* Tvarsel[resultmodel[2]]= Tvarsel[1] = 4=k2 */ |
k2q=(int)Tvarsel[k3q]; /* Tvarsel[resultmodel[2]]= Tvarsel[1] = 4=k2 */ |
Tqresult[nres][k4q+1]=Tvalsel[k3q]; |
Tqresult[nres][k4q+1]=Tvalsel[k3q]; /* Tqresult[nres][1]=25.1 */ |
Tvqresult[nres][k4q+1]=(int)Tvarsel[k3q]; |
Tvqresult[nres][k4q+1]=(int)Tvarsel[k3q]; /* Tvqresult[nres][1]=5 */ |
|
Tqinvresult[nres][(int)Tvarsel[k3q]]=Tvalsel[k3q]; /* Tqinvresult[nres][5]=25.1 */ |
printf("Decoderesult Quantitative nres=%d, V(k2q=V%d)= Tvalsel[%d]=%d, Tvarsel[%d]=%f\n",nres, k2q, k3q, Tvarsel[k3q], k3q, Tvalsel[k3q]); |
printf("Decoderesult Quantitative nres=%d, V(k2q=V%d)= Tvalsel[%d]=%d, Tvarsel[%d]=%f\n",nres, k2q, k3q, Tvarsel[k3q], k3q, Tvalsel[k3q]); |
k4q++;; |
k4q++;; |
} |
} |