version 1.263, 2017/04/24 15:23:15
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version 1.264, 2017/04/26 06:01:29
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/* $Id$ |
/* $Id$ |
$State$ |
$State$ |
$Log$ |
$Log$ |
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Revision 1.264 2017/04/26 06:01:29 brouard |
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Summary: Labels in graphs |
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Revision 1.263 2017/04/24 15:23:15 brouard |
Revision 1.263 2017/04/24 15:23:15 brouard |
Summary: to save |
Summary: to save |
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Line 2615 Earliest age to start was %d-%d=%d, ncvl
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Line 2618 Earliest age to start was %d-%d=%d, ncvl
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/* double **bprevalim(double **bprlim, double ***prevacurrent, int nlstate, double x[], double age, double **oldm, double **savm, double **dnewm, double **doldm, double **dsavm, double ftolpl, int *ncvyear, int ij) */ |
/* double **bprevalim(double **bprlim, double ***prevacurrent, int nlstate, double x[], double age, double **oldm, double **savm, double **dnewm, double **doldm, double **dsavm, double ftolpl, int *ncvyear, int ij) */ |
double **bprevalim(double **bprlim, double ***prevacurrent, int nlstate, double x[], double age, double ftolpl, int *ncvyear, int ij, int nres) |
double **bprevalim(double **bprlim, double ***prevacurrent, int nlstate, double x[], double age, double ftolpl, int *ncvyear, int ij, int nres) |
{ |
{ |
/* Computes the prevalence limit in each live state at age x and covariate ij by left multiplying the unit |
/* Computes the prevalence limit in each live state at age x and for covariate combination ij (<=2**cptcoveff) by left multiplying the unit |
matrix by transitions matrix until convergence is reached with precision ftolpl */ |
matrix by transitions matrix until convergence is reached with precision ftolpl */ |
/* Wx= Wx-1 Px-1= Wx-2 Px-2 Px-1 = Wx-n Px-n ... Px-2 Px-1 I */ |
/* Wx= Wx-1 Px-1= Wx-2 Px-2 Px-1 = Wx-n Px-n ... Px-2 Px-1 I */ |
/* Wx is row vector: population in state 1, population in state 2, population dead */ |
/* Wx is row vector: population in state 1, population in state 2, population dead */ |
Line 2676 Earliest age to start was %d-%d=%d, ncvl
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Line 2679 Earliest age to start was %d-%d=%d, ncvl
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for (k=1; k<=nsd;k++) { /* For single dummy covariates only */ |
for (k=1; k<=nsd;k++) { /* For single dummy covariates only */ |
/* Here comes the value of the covariate 'ij' after renumbering k with single dummy covariates */ |
/* Here comes the value of the covariate 'ij' after renumbering k with single dummy covariates */ |
cov[2+nagesqr+TvarsDind[k]]=nbcode[TvarsD[k]][codtabm(ij,k)]; |
cov[2+nagesqr+TvarsDind[k]]=nbcode[TvarsD[k]][codtabm(ij,k)]; |
/* printf("bprevalim Dummy combi=%d k=%d TvarsD[%d]=V%d TvarsDind[%d]=%d nbcode=%d cov=%lf codtabm(%d,Tvar[%d])=%d \n",ij,k, k, TvarsD[k],k,TvarsDind[k],nbcode[TvarsD[k]][codtabm(ij,k)],cov[2+nagesqr+TvarsDind[k]], ij, k, codtabm(ij,k)); */ |
/* printf("bprevalim Dummy agefin=%.0f combi=%d k=%d TvarsD[%d]=V%d TvarsDind[%d]=%d nbcode=%d cov[%d]=%lf codtabm(%d,Tvar[%d])=%d \n",agefin,ij,k, k, TvarsD[k],k,TvarsDind[k],nbcode[TvarsD[k]][codtabm(ij,k)],2+nagesqr+TvarsDind[k],cov[2+nagesqr+TvarsDind[k]], ij, k, codtabm(ij,k)); */ |
} |
} |
/* for (k=1; k<=cptcovn;k++) { */ |
/* for (k=1; k<=cptcovn;k++) { */ |
/* /\* cov[2+nagesqr+k]=nbcode[Tvar[k]][codtabm(ij,Tvar[k])]; *\/ */ |
/* /\* cov[2+nagesqr+k]=nbcode[Tvar[k]][codtabm(ij,Tvar[k])]; *\/ */ |
Line 4619 Title=%s <br>Datafile=%s Firstpass=%d La
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Line 4622 Title=%s <br>Datafile=%s Firstpass=%d La
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if( iage <= iagemax){ |
if( iage <= iagemax){ |
if(pos>=1.e-5){ |
if(pos>=1.e-5){ |
fprintf(ficresp," %d %.5f %.0f %.0f",iage,prop[jk][iage]/pospropta, prop[jk][iage],pospropta); |
fprintf(ficresp," %d %.5f %.0f %.0f",iage,prop[jk][iage]/pospropta, prop[jk][iage],pospropta); |
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/* fprintf(ficresp, "%d %d %d %.5f %.0f %.0f",Tvaraff[z1],nbcode[Tvaraff[z1]][codtabm(j1,z1)],iage,prop[jk][iage]/pospropta, prop[jk][iage],pospropta); */ |
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fprintf(ficresphtm,"<th>%d</th><td>%.5f</td><td>%.0f</td><td>%.0f</td>",iage,prop[jk][iage]/pospropta, prop[jk][iage],pospropta); |
fprintf(ficresphtm,"<th>%d</th><td>%.5f</td><td>%.0f</td><td>%.0f</td>",iage,prop[jk][iage]/pospropta, prop[jk][iage],pospropta); |
/*probs[iage][jk][j1]= pp[jk]/pos;*/ |
/*probs[iage][jk][j1]= pp[jk]/pos;*/ |
/*printf("\niage=%d jk=%d j1=%d %.5f %.0f %.0f %f",iage,jk,j1,pp[jk]/pos, pp[jk],pos,probs[iage][jk][j1]);*/ |
/*printf("\niage=%d jk=%d j1=%d %.5f %.0f %.0f %f",iage,jk,j1,pp[jk]/pos, pp[jk],pos,probs[iage][jk][j1]);*/ |
Line 6435 void printinghtml(char fileresu[], char
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Line 6440 void printinghtml(char fileresu[], char
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<a href=\"%s\">%s</a> <br>\n</li>", subdirf2(fileresu,"F_"),subdirf2(fileresu,"F_")); |
<a href=\"%s\">%s</a> <br>\n</li>", subdirf2(fileresu,"F_"),subdirf2(fileresu,"F_")); |
} |
} |
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fprintf(fichtm," \n<ul><li><b>Graphs</b></li><p>"); |
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m=pow(2,cptcoveff); |
m=pow(2,cptcoveff); |
if (cptcovn < 1) {m=1;ncodemax[1]=1;} |
if (cptcovn < 1) {m=1;ncodemax[1]=1;} |
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fprintf(fichtm," \n<ul><li><b>Graphs</b></li><p>"); |
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jj1=0; |
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fprintf(fichtm," \n<ul>"); |
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for(nres=1; nres <= nresult; nres++) /* For each resultline */ |
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for(k1=1; k1<=m;k1++){ /* For each combination of covariate */ |
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if(m != 1 && TKresult[nres]!= k1) |
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continue; |
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jj1++; |
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if (cptcovn > 0) { |
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fprintf(fichtm,"\n<li><a size=\"1\" color=\"#EC5E5E\" href=\"#rescov"); |
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for (cpt=1; cpt<=cptcoveff;cpt++){ |
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fprintf(fichtm,"_V%d=%d_",Tvresult[nres][cpt],(int)Tresult[nres][cpt]); |
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} |
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for (k4=1; k4<= nsq; k4++){ /* For each selected (single) quantitative value */ |
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fprintf(fichtm,"_V%d=%f_",Tvqresult[nres][k4],Tqresult[nres][k4]); |
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} |
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fprintf(fichtm,"\">"); |
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/* if(nqfveff+nqtveff 0) */ /* Test to be done */ |
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fprintf(fichtm,"************ Results for covariates"); |
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for (cpt=1; cpt<=cptcoveff;cpt++){ |
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fprintf(fichtm," V%d=%d ",Tvresult[nres][cpt],(int)Tresult[nres][cpt]); |
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} |
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for (k4=1; k4<= nsq; k4++){ /* For each selected (single) quantitative value */ |
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fprintf(fichtm," V%d=%f ",Tvqresult[nres][k4],Tqresult[nres][k4]); |
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} |
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if(invalidvarcomb[k1]){ |
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fprintf(fichtm," Warning Combination (%d) ignored because no cases ",k1); |
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continue; |
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} |
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fprintf(fichtm,"</a></li>"); |
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} /* cptcovn >0 */ |
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} |
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fprintf(fichtm," \n</ul>"); |
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jj1=0; |
jj1=0; |
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for(nres=1; nres <= nresult; nres++) /* For each resultline */ |
for(nres=1; nres <= nresult; nres++) /* For each resultline */ |
Line 6450 void printinghtml(char fileresu[], char
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Line 6491 void printinghtml(char fileresu[], char
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/* for(i1=1; i1<=ncodemax[k1];i1++){ */ |
/* for(i1=1; i1<=ncodemax[k1];i1++){ */ |
jj1++; |
jj1++; |
if (cptcovn > 0) { |
if (cptcovn > 0) { |
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fprintf(fichtm,"\n<p><a name=\"rescov"); |
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for (cpt=1; cpt<=cptcoveff;cpt++){ |
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fprintf(fichtm,"_V%d=%d_",Tvresult[nres][cpt],(int)Tresult[nres][cpt]); |
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} |
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for (k4=1; k4<= nsq; k4++){ /* For each selected (single) quantitative value */ |
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fprintf(fichtm,"_V%d=%f_",Tvqresult[nres][k4],Tqresult[nres][k4]); |
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} |
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fprintf(fichtm,"\"</a>"); |
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fprintf(fichtm,"<hr size=\"2\" color=\"#EC5E5E\">************ Results for covariates"); |
fprintf(fichtm,"<hr size=\"2\" color=\"#EC5E5E\">************ Results for covariates"); |
for (cpt=1; cpt<=cptcoveff;cpt++){ |
for (cpt=1; cpt<=cptcoveff;cpt++){ |
fprintf(fichtm," V%d=%d ",Tvresult[nres][cpt],(int)Tresult[nres][cpt]); |
fprintf(fichtm," V%d=%d ",Tvresult[nres][cpt],(int)Tresult[nres][cpt]); |
Line 6495 divided by h: <sub>h</sub>P<sub>ij</sub>
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Line 6545 divided by h: <sub>h</sub>P<sub>ij</sub>
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} |
} |
/* Period (stable) prevalence in each health state */ |
/* Period (stable) prevalence in each health state */ |
for(cpt=1; cpt<=nlstate;cpt++){ |
for(cpt=1; cpt<=nlstate;cpt++){ |
fprintf(fichtm,"<br>\n- Convergence to period (stable) prevalence in state %d. Or probability to be in state %d some years earlier, knowing that we will be in state (1 to %d) at different ages. <a href=\"%s_%d-%d-%d.svg\">%s_%d-%d-%d.svg</a><br> \ |
fprintf(fichtm,"<br>\n- Convergence to period (stable) prevalence in state %d. Or probability for a person being in state (1 to %d) at different ages, to be in state %d some years after. <a href=\"%s_%d-%d-%d.svg\">%s_%d-%d-%d.svg</a><br> \ |
<img src=\"%s_%d-%d-%d.svg\">", cpt, cpt, nlstate, subdirf2(optionfilefiname,"P_"),cpt,k1,nres,subdirf2(optionfilefiname,"P_"),cpt,k1,nres,subdirf2(optionfilefiname,"P_"),cpt,k1,nres); |
<img src=\"%s_%d-%d-%d.svg\">", cpt, nlstate, cpt, subdirf2(optionfilefiname,"P_"),cpt,k1,nres,subdirf2(optionfilefiname,"P_"),cpt,k1,nres,subdirf2(optionfilefiname,"P_"),cpt,k1,nres); |
} |
} |
if(backcast==1){ |
if(backcast==1){ |
/* Period (stable) back prevalence in each health state */ |
/* Period (stable) back prevalence in each health state */ |
for(cpt=1; cpt<=nlstate;cpt++){ |
for(cpt=1; cpt<=nlstate;cpt++){ |
fprintf(fichtm,"<br>\n- Convergence to mixed (stable) back prevalence in state %d. Or probability to be in state %d at a younger age, knowing that we will be in state (1 to %d) at different older ages. <a href=\"%s_%d-%d-%d.svg\">%s_%d-%d-%d.svg</a><br> \ |
fprintf(fichtm,"<br>\n- Convergence to mixed (stable) back prevalence in state %d. Or probability for a person to be in state %d at a younger age, knowing that she/he was in state (1 to %d) at different older ages. <a href=\"%s_%d-%d-%d.svg\">%s_%d-%d-%d.svg</a><br> \ |
<img src=\"%s_%d-%d-%d.svg\">", cpt, cpt, nlstate, subdirf2(optionfilefiname,"PB_"),cpt,k1,nres,subdirf2(optionfilefiname,"PB_"),cpt,k1,nres,subdirf2(optionfilefiname,"PB_"),cpt,k1,nres); |
<img src=\"%s_%d-%d-%d.svg\">", cpt, cpt, nlstate, subdirf2(optionfilefiname,"PB_"),cpt,k1,nres,subdirf2(optionfilefiname,"PB_"),cpt,k1,nres,subdirf2(optionfilefiname,"PB_"),cpt,k1,nres); |
} |
} |
} |
} |
Line 6618 true period expectancies (those weighted
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Line 6668 true period expectancies (those weighted
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void printinggnuplot(char fileresu[], char optionfilefiname[], double ageminpar, double agemaxpar, double fage , int prevfcast, int backcast, char pathc[], double p[]){ |
void printinggnuplot(char fileresu[], char optionfilefiname[], double ageminpar, double agemaxpar, double fage , int prevfcast, int backcast, char pathc[], double p[]){ |
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char dirfileres[132],optfileres[132]; |
char dirfileres[132],optfileres[132]; |
char gplotcondition[132]; |
char gplotcondition[132], gplotlabel[132]; |
int cpt=0,k1=0,i=0,k=0,j=0,jk=0,k2=0,k3=0,k4=0,ij=0, ijp=0, l=0; |
int cpt=0,k1=0,i=0,k=0,j=0,jk=0,k2=0,k3=0,k4=0,ij=0, ijp=0, l=0; |
int lv=0, vlv=0, kl=0; |
int lv=0, vlv=0, kl=0; |
int ng=0; |
int ng=0; |
Line 6677 void printinggnuplot(char fileresu[], ch
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Line 6727 void printinggnuplot(char fileresu[], ch
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/* We are interested in selected combination by the resultline */ |
/* We are interested in selected combination by the resultline */ |
/* printf("\n# 1st: Period (stable) prevalence with CI: 'VPL_' files and live state =%d ", cpt); */ |
/* printf("\n# 1st: Period (stable) prevalence with CI: 'VPL_' files and live state =%d ", cpt); */ |
fprintf(ficgp,"\n# 1st: Period (stable) prevalence with CI: 'VPL_' files and live state =%d ", cpt); |
fprintf(ficgp,"\n# 1st: Period (stable) prevalence with CI: 'VPL_' files and live state =%d ", cpt); |
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strcpy(gplotlabel,"("); |
for (k=1; k<=cptcoveff; k++){ /* For each covariate k get corresponding value lv for combination k1 */ |
for (k=1; k<=cptcoveff; k++){ /* For each covariate k get corresponding value lv for combination k1 */ |
lv= decodtabm(k1,k,cptcoveff); /* Should be the value of the covariate corresponding to k1 combination */ |
lv= decodtabm(k1,k,cptcoveff); /* Should be the value of the covariate corresponding to k1 combination */ |
/* decodtabm(1,1,4) = 1 because h=1 k= (1) 1 1 1 */ |
/* decodtabm(1,1,4) = 1 because h=1 k= (1) 1 1 1 */ |
Line 6686 void printinggnuplot(char fileresu[], ch
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Line 6737 void printinggnuplot(char fileresu[], ch
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/* For each combination of covariate k1 (V1=1, V3=0), we printed the current covariate k and its value vlv */ |
/* For each combination of covariate k1 (V1=1, V3=0), we printed the current covariate k and its value vlv */ |
/* printf(" V%d=%d ",Tvaraff[k],vlv); */ |
/* printf(" V%d=%d ",Tvaraff[k],vlv); */ |
fprintf(ficgp," V%d=%d ",Tvaraff[k],vlv); |
fprintf(ficgp," V%d=%d ",Tvaraff[k],vlv); |
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sprintf(gplotlabel+strlen(gplotlabel)," V%d=%d ",Tvaraff[k],vlv); |
} |
} |
for (k4=1; k4<= nsq; k4++){ /* For each selected (single) quantitative value */ |
for (k4=1; k4<= nsq; k4++){ /* For each selected (single) quantitative value */ |
/* printf(" V%d=%f ",Tvqresult[nres][k4],Tqresult[nres][k4]); */ |
/* printf(" V%d=%f ",Tvqresult[nres][k4],Tqresult[nres][k4]); */ |
fprintf(ficgp," V%d=%f ",Tvqresult[nres][k4],Tqresult[nres][k4]); |
fprintf(ficgp," V%d=%f ",Tvqresult[nres][k4],Tqresult[nres][k4]); |
} |
sprintf(gplotlabel+strlen(gplotlabel)," V%d=%f ",Tvqresult[nres][k4],Tqresult[nres][k4]); |
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} |
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strcpy(gplotlabel+strlen(gplotlabel),")"); |
/* printf("\n#\n"); */ |
/* printf("\n#\n"); */ |
fprintf(ficgp,"\n#\n"); |
fprintf(ficgp,"\n#\n"); |
if(invalidvarcomb[k1]){ |
if(invalidvarcomb[k1]){ |
Line 6701 void printinggnuplot(char fileresu[], ch
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Line 6755 void printinggnuplot(char fileresu[], ch
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fprintf(ficgp,"\nset out \"%s_%d-%d-%d.svg\" \n",subdirf2(optionfilefiname,"V_"),cpt,k1,nres); |
fprintf(ficgp,"\nset out \"%s_%d-%d-%d.svg\" \n",subdirf2(optionfilefiname,"V_"),cpt,k1,nres); |
fprintf(ficgp,"\n#set out \"V_%s_%d-%d-%d.svg\" \n",optionfilefiname,cpt,k1,nres); |
fprintf(ficgp,"\n#set out \"V_%s_%d-%d-%d.svg\" \n",optionfilefiname,cpt,k1,nres); |
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fprintf(ficgp,"set label \"Alive state %d %s\" at graph 0.98,0.5 center rotate font \"Helvetica,12\"\n",cpt,gplotlabel); |
fprintf(ficgp,"set xlabel \"Age\" \nset ylabel \"Probability\" \nset ter svg size 640, 480\nplot [%.f:%.f] \"%s\" every :::%d::%d u 1:($2==%d ? $3:1/0) \"%%lf %%lf",ageminpar,fage,subdirf2(fileresu,"VPL_"),nres-1,nres-1,nres); |
fprintf(ficgp,"set xlabel \"Age\" \nset ylabel \"Probability\" \nset ter svg size 640, 480\nplot [%.f:%.f] \"%s\" every :::%d::%d u 1:($2==%d ? $3:1/0) \"%%lf %%lf",ageminpar,fage,subdirf2(fileresu,"VPL_"),nres-1,nres-1,nres); |
/* fprintf(ficgp,"set xlabel \"Age\" \nset ylabel \"Probability\" \nset ter svg size 640, 480\nplot [%.f:%.f] \"%s\" every :::%d::%d u 1:($2==%d ? $3:1/0) \"%%lf %%lf",ageminpar,fage,subdirf2(fileresu,"VPL_"),k1-1,k1-1,nres); */ |
/* fprintf(ficgp,"set xlabel \"Age\" \nset ylabel \"Probability\" \nset ter svg size 640, 480\nplot [%.f:%.f] \"%s\" every :::%d::%d u 1:($2==%d ? $3:1/0) \"%%lf %%lf",ageminpar,fage,subdirf2(fileresu,"VPL_"),k1-1,k1-1,nres); */ |
/* k1-1 error should be nres-1*/ |
/* k1-1 error should be nres-1*/ |
Line 6747 void printinggnuplot(char fileresu[], ch
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Line 6802 void printinggnuplot(char fileresu[], ch
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} /* end covariate */ |
} /* end covariate */ |
} /* end if no covariate */ |
} /* end if no covariate */ |
} /* end if backcast */ |
} /* end if backcast */ |
fprintf(ficgp,"\nset out \n"); |
fprintf(ficgp,"\nset out ;unset label;\n"); |
} /* nres */ |
} /* nres */ |
} /* k1 */ |
} /* k1 */ |
} /* cpt */ |
} /* cpt */ |
Line 6759 void printinggnuplot(char fileresu[], ch
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Line 6814 void printinggnuplot(char fileresu[], ch
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if(m != 1 && TKresult[nres]!= k1) |
if(m != 1 && TKresult[nres]!= k1) |
continue; |
continue; |
fprintf(ficgp,"\n# 2nd: Total life expectancy with CI: 't' files "); |
fprintf(ficgp,"\n# 2nd: Total life expectancy with CI: 't' files "); |
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strcpy(gplotlabel,"("); |
for (k=1; k<=cptcoveff; k++){ /* For each covariate and each value */ |
for (k=1; k<=cptcoveff; k++){ /* For each covariate and each value */ |
lv= decodtabm(k1,k,cptcoveff); /* Should be the covariate number corresponding to k1 combination */ |
lv= decodtabm(k1,k,cptcoveff); /* Should be the covariate number corresponding to k1 combination */ |
/* decodtabm(1,1,4) = 1 because h=1 k= (1) 1 1 1 */ |
/* decodtabm(1,1,4) = 1 because h=1 k= (1) 1 1 1 */ |
Line 6766 void printinggnuplot(char fileresu[], ch
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Line 6822 void printinggnuplot(char fileresu[], ch
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/* decodtabm(13,3,4)= 2 because h=13 k= 1 1 (2) 2 */ |
/* decodtabm(13,3,4)= 2 because h=13 k= 1 1 (2) 2 */ |
vlv= nbcode[Tvaraff[k]][lv]; |
vlv= nbcode[Tvaraff[k]][lv]; |
fprintf(ficgp," V%d=%d ",Tvaraff[k],vlv); |
fprintf(ficgp," V%d=%d ",Tvaraff[k],vlv); |
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sprintf(gplotlabel+strlen(gplotlabel)," V%d=%d ",Tvaraff[k],vlv); |
} |
} |
/* for(k=1; k <= ncovds; k++){ */ |
/* for(k=1; k <= ncovds; k++){ */ |
for (k4=1; k4<= nsq; k4++){ /* For each selected (single) quantitative value */ |
for (k4=1; k4<= nsq; k4++){ /* For each selected (single) quantitative value */ |
printf(" V%d=%f ",Tvqresult[nres][k4],Tqresult[nres][k4]); |
printf(" V%d=%f ",Tvqresult[nres][k4],Tqresult[nres][k4]); |
fprintf(ficgp," V%d=%f ",Tvqresult[nres][k4],Tqresult[nres][k4]); |
fprintf(ficgp," V%d=%f ",Tvqresult[nres][k4],Tqresult[nres][k4]); |
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sprintf(gplotlabel+strlen(gplotlabel)," V%d=%f ",Tvqresult[nres][k4],Tqresult[nres][k4]); |
} |
} |
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strcpy(gplotlabel+strlen(gplotlabel),")"); |
fprintf(ficgp,"\n#\n"); |
fprintf(ficgp,"\n#\n"); |
if(invalidvarcomb[k1]){ |
if(invalidvarcomb[k1]){ |
fprintf(ficgp,"#Combination (%d) ignored because no cases \n",k1); |
fprintf(ficgp,"#Combination (%d) ignored because no cases \n",k1); |
Line 6780 void printinggnuplot(char fileresu[], ch
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Line 6839 void printinggnuplot(char fileresu[], ch
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fprintf(ficgp,"\nset out \"%s_%d-%d.svg\" \n",subdirf2(optionfilefiname,"E_"),k1,nres); |
fprintf(ficgp,"\nset out \"%s_%d-%d.svg\" \n",subdirf2(optionfilefiname,"E_"),k1,nres); |
for(vpopbased=0; vpopbased <= popbased; vpopbased++){ /* Done for vpopbased=0 and vpopbased=1 if popbased==1*/ |
for(vpopbased=0; vpopbased <= popbased; vpopbased++){ /* Done for vpopbased=0 and vpopbased=1 if popbased==1*/ |
if(vpopbased==0) |
fprintf(ficgp,"\nset label \"popbased %d %s\" at graph 0.98,0.5 center rotate font \"Helvetica,12\"\n",vpopbased,gplotlabel); |
|
if(vpopbased==0){ |
fprintf(ficgp,"set ylabel \"Years\" \nset ter svg size 640, 480\nplot [%.f:%.f] ",ageminpar,fage); |
fprintf(ficgp,"set ylabel \"Years\" \nset ter svg size 640, 480\nplot [%.f:%.f] ",ageminpar,fage); |
else |
}else |
fprintf(ficgp,"\nreplot "); |
fprintf(ficgp,"\nreplot "); |
for (i=1; i<= nlstate+1 ; i ++) { |
for (i=1; i<= nlstate+1 ; i ++) { |
k=2*i; |
k=2*i; |
Line 6808 void printinggnuplot(char fileresu[], ch
|
Line 6868 void printinggnuplot(char fileresu[], ch
|
else fprintf(ficgp,"\" t\"\" w l lt 0,\\\n"); |
else fprintf(ficgp,"\" t\"\" w l lt 0,\\\n"); |
} /* state */ |
} /* state */ |
} /* vpopbased */ |
} /* vpopbased */ |
fprintf(ficgp,"\nset out;set out \"%s_%d-%d.svg\"; replot; set out; \n",subdirf2(optionfilefiname,"E_"),k1,nres); /* Buggy gnuplot */ |
fprintf(ficgp,"\nset out;set out \"%s_%d-%d.svg\"; replot; set out; unset label;\n",subdirf2(optionfilefiname,"E_"),k1,nres); /* Buggy gnuplot */ |
} /* end nres */ |
} /* end nres */ |
} /* k1 end 2 eme*/ |
} /* k1 end 2 eme*/ |
|
|
Line 6821 void printinggnuplot(char fileresu[], ch
|
Line 6881 void printinggnuplot(char fileresu[], ch
|
|
|
for (cpt=1; cpt<= nlstate ; cpt ++) { |
for (cpt=1; cpt<= nlstate ; cpt ++) { |
fprintf(ficgp,"\n\n# 3d: Life expectancy with EXP_ files: combination=%d state=%d",k1, cpt); |
fprintf(ficgp,"\n\n# 3d: Life expectancy with EXP_ files: combination=%d state=%d",k1, cpt); |
|
strcpy(gplotlabel,"("); |
for (k=1; k<=cptcoveff; k++){ /* For each covariate and each value */ |
for (k=1; k<=cptcoveff; k++){ /* For each covariate and each value */ |
lv= decodtabm(k1,k,cptcoveff); /* Should be the covariate number corresponding to k1 combination */ |
lv= decodtabm(k1,k,cptcoveff); /* Should be the covariate number corresponding to k1 combination */ |
/* decodtabm(1,1,4) = 1 because h=1 k= (1) 1 1 1 */ |
/* decodtabm(1,1,4) = 1 because h=1 k= (1) 1 1 1 */ |
Line 6828 void printinggnuplot(char fileresu[], ch
|
Line 6889 void printinggnuplot(char fileresu[], ch
|
/* decodtabm(13,3,4)= 2 because h=13 k= 1 1 (2) 2 */ |
/* decodtabm(13,3,4)= 2 because h=13 k= 1 1 (2) 2 */ |
vlv= nbcode[Tvaraff[k]][lv]; |
vlv= nbcode[Tvaraff[k]][lv]; |
fprintf(ficgp," V%d=%d ",Tvaraff[k],vlv); |
fprintf(ficgp," V%d=%d ",Tvaraff[k],vlv); |
|
sprintf(gplotlabel+strlen(gplotlabel)," V%d=%d ",Tvaraff[k],vlv); |
} |
} |
for (k4=1; k4<= nsq; k4++){ /* For each selected (single) quantitative value */ |
for (k4=1; k4<= nsq; k4++){ /* For each selected (single) quantitative value */ |
fprintf(ficgp," V%d=%f ",Tvqresult[nres][k4],Tqresult[nres][k4]); |
fprintf(ficgp," V%d=%f ",Tvqresult[nres][k4],Tqresult[nres][k4]); |
|
sprintf(gplotlabel+strlen(gplotlabel)," V%d=%f ",Tvqresult[nres][k4],Tqresult[nres][k4]); |
} |
} |
|
strcpy(gplotlabel+strlen(gplotlabel),")"); |
fprintf(ficgp,"\n#\n"); |
fprintf(ficgp,"\n#\n"); |
if(invalidvarcomb[k1]){ |
if(invalidvarcomb[k1]){ |
fprintf(ficgp,"#Combination (%d) ignored because no cases \n",k1); |
fprintf(ficgp,"#Combination (%d) ignored because no cases \n",k1); |
Line 6841 void printinggnuplot(char fileresu[], ch
|
Line 6905 void printinggnuplot(char fileresu[], ch
|
/* k=2+nlstate*(2*cpt-2); */ |
/* k=2+nlstate*(2*cpt-2); */ |
k=2+(nlstate+1)*(cpt-1); |
k=2+(nlstate+1)*(cpt-1); |
fprintf(ficgp,"\nset out \"%s_%d-%d-%d.svg\" \n",subdirf2(optionfilefiname,"EXP_"),cpt,k1,nres); |
fprintf(ficgp,"\nset out \"%s_%d-%d-%d.svg\" \n",subdirf2(optionfilefiname,"EXP_"),cpt,k1,nres); |
|
fprintf(ficgp,"set label \"%s\" at graph 0.98,0.5 center rotate font \"Helvetica,12\"\n",gplotlabel); |
fprintf(ficgp,"set ter svg size 640, 480\n\ |
fprintf(ficgp,"set ter svg size 640, 480\n\ |
plot [%.f:%.f] \"%s\" every :::%d::%d u 1:%d t \"e%d1\" w l",ageminpar,fage,subdirf2(fileresu,"E_"),nres-1,nres-1,k,cpt); |
plot [%.f:%.f] \"%s\" every :::%d::%d u 1:%d t \"e%d1\" w l",ageminpar,fage,subdirf2(fileresu,"E_"),nres-1,nres-1,k,cpt); |
/*fprintf(ficgp,",\"e%s\" every :::%d::%d u 1:($%d-2*$%d) \"\%%lf ",fileres,k1-1,k1-1,k,k+1); |
/*fprintf(ficgp,",\"e%s\" every :::%d::%d u 1:($%d-2*$%d) \"\%%lf ",fileres,k1-1,k1-1,k,k+1); |
Line 6858 plot [%.f:%.f] \"%s\" every :::%d::%d u
|
Line 6923 plot [%.f:%.f] \"%s\" every :::%d::%d u
|
} |
} |
fprintf(ficgp," ,\"%s\" every :::%d::%d u 1:%d t \"e%d.\" w l",subdirf2(fileresu,"E_"),nres-1,nres-1,k+nlstate,cpt); |
fprintf(ficgp," ,\"%s\" every :::%d::%d u 1:%d t \"e%d.\" w l",subdirf2(fileresu,"E_"),nres-1,nres-1,k+nlstate,cpt); |
} |
} |
|
fprintf(ficgp,"\nunset label;\n"); |
} /* end nres */ |
} /* end nres */ |
} /* end kl 3eme */ |
} /* end kl 3eme */ |
|
|
Line 6868 plot [%.f:%.f] \"%s\" every :::%d::%d u
|
Line 6934 plot [%.f:%.f] \"%s\" every :::%d::%d u
|
if(m != 1 && TKresult[nres]!= k1) |
if(m != 1 && TKresult[nres]!= k1) |
continue; |
continue; |
for (cpt=1; cpt<=nlstate ; cpt ++) { /* For each life state cpt*/ |
for (cpt=1; cpt<=nlstate ; cpt ++) { /* For each life state cpt*/ |
|
strcpy(gplotlabel,"("); |
fprintf(ficgp,"\n#\n#\n# Survival functions in state j : 'LIJ_' files, cov=%d state=%d",k1, cpt); |
fprintf(ficgp,"\n#\n#\n# Survival functions in state j : 'LIJ_' files, cov=%d state=%d",k1, cpt); |
for (k=1; k<=cptcoveff; k++){ /* For each covariate and each value */ |
for (k=1; k<=cptcoveff; k++){ /* For each covariate and each value */ |
lv= decodtabm(k1,k,cptcoveff); /* Should be the covariate number corresponding to k1 combination */ |
lv= decodtabm(k1,k,cptcoveff); /* Should be the covariate number corresponding to k1 combination */ |
Line 6876 plot [%.f:%.f] \"%s\" every :::%d::%d u
|
Line 6943 plot [%.f:%.f] \"%s\" every :::%d::%d u
|
/* decodtabm(13,3,4)= 2 because h=13 k= 1 1 (2) 2 */ |
/* decodtabm(13,3,4)= 2 because h=13 k= 1 1 (2) 2 */ |
vlv= nbcode[Tvaraff[k]][lv]; |
vlv= nbcode[Tvaraff[k]][lv]; |
fprintf(ficgp," V%d=%d ",Tvaraff[k],vlv); |
fprintf(ficgp," V%d=%d ",Tvaraff[k],vlv); |
|
sprintf(gplotlabel+strlen(gplotlabel)," V%d=%d ",Tvaraff[k],vlv); |
} |
} |
for (k4=1; k4<= nsq; k4++){ /* For each selected (single) quantitative value */ |
for (k4=1; k4<= nsq; k4++){ /* For each selected (single) quantitative value */ |
fprintf(ficgp," V%d=%f ",Tvqresult[nres][k4],Tqresult[nres][k4]); |
fprintf(ficgp," V%d=%f ",Tvqresult[nres][k4],Tqresult[nres][k4]); |
|
sprintf(gplotlabel+strlen(gplotlabel)," V%d=%f ",Tvqresult[nres][k4],Tqresult[nres][k4]); |
} |
} |
|
strcpy(gplotlabel+strlen(gplotlabel),")"); |
fprintf(ficgp,"\n#\n"); |
fprintf(ficgp,"\n#\n"); |
if(invalidvarcomb[k1]){ |
if(invalidvarcomb[k1]){ |
fprintf(ficgp,"#Combination (%d) ignored because no cases \n",k1); |
fprintf(ficgp,"#Combination (%d) ignored because no cases \n",k1); |
Line 6887 plot [%.f:%.f] \"%s\" every :::%d::%d u
|
Line 6957 plot [%.f:%.f] \"%s\" every :::%d::%d u
|
} |
} |
|
|
fprintf(ficgp,"\nset out \"%s_%d-%d-%d.svg\" \n",subdirf2(optionfilefiname,"LIJ_"),cpt,k1,nres); |
fprintf(ficgp,"\nset out \"%s_%d-%d-%d.svg\" \n",subdirf2(optionfilefiname,"LIJ_"),cpt,k1,nres); |
|
fprintf(ficgp,"set label \"Alive state %d %s\" at graph 0.98,0.5 center rotate font \"Helvetica,12\"\n",cpt,gplotlabel); |
fprintf(ficgp,"set xlabel \"Age\" \nset ylabel \"Probability to be alive\" \n\ |
fprintf(ficgp,"set xlabel \"Age\" \nset ylabel \"Probability to be alive\" \n\ |
set ter svg size 640, 480\nunset log y\nplot [%.f:%.f] ", ageminpar, agemaxpar); |
set ter svg size 640, 480\nunset log y\nplot [%.f:%.f] ", ageminpar, agemaxpar); |
k=3; |
k=3; |
Line 6902 set ter svg size 640, 480\nunset log y\n
|
Line 6973 set ter svg size 640, 480\nunset log y\n
|
fprintf(ficgp,"+$%d",k+l+j-1); |
fprintf(ficgp,"+$%d",k+l+j-1); |
fprintf(ficgp,")) t \"l(%d,%d)\" w l",i,cpt); |
fprintf(ficgp,")) t \"l(%d,%d)\" w l",i,cpt); |
} /* nlstate */ |
} /* nlstate */ |
fprintf(ficgp,"\nset out\n"); |
fprintf(ficgp,"\nset out; unset label;\n"); |
} /* end cpt state*/ |
} /* end cpt state*/ |
} /* end nres */ |
} /* end nres */ |
} /* end covariate k1 */ |
} /* end covariate k1 */ |
Line 6914 set ter svg size 640, 480\nunset log y\n
|
Line 6985 set ter svg size 640, 480\nunset log y\n
|
if(m != 1 && TKresult[nres]!= k1) |
if(m != 1 && TKresult[nres]!= k1) |
continue; |
continue; |
for (cpt=1; cpt<=nlstate ; cpt ++) { /* For each inital state */ |
for (cpt=1; cpt<=nlstate ; cpt ++) { /* For each inital state */ |
|
strcpy(gplotlabel,"("); |
fprintf(ficgp,"\n#\n#\n# Survival functions in state j and all livestates from state i by final state j: 'lij' files, cov=%d state=%d",k1, cpt); |
fprintf(ficgp,"\n#\n#\n# Survival functions in state j and all livestates from state i by final state j: 'lij' files, cov=%d state=%d",k1, cpt); |
for (k=1; k<=cptcoveff; k++){ /* For each covariate and each value */ |
for (k=1; k<=cptcoveff; k++){ /* For each covariate and each value */ |
lv= decodtabm(k1,k,cptcoveff); /* Should be the covariate number corresponding to k1 combination */ |
lv= decodtabm(k1,k,cptcoveff); /* Should be the covariate number corresponding to k1 combination */ |
Line 6922 set ter svg size 640, 480\nunset log y\n
|
Line 6994 set ter svg size 640, 480\nunset log y\n
|
/* decodtabm(13,3,4)= 2 because h=13 k= 1 1 (2) 2 */ |
/* decodtabm(13,3,4)= 2 because h=13 k= 1 1 (2) 2 */ |
vlv= nbcode[Tvaraff[k]][lv]; |
vlv= nbcode[Tvaraff[k]][lv]; |
fprintf(ficgp," V%d=%d ",Tvaraff[k],vlv); |
fprintf(ficgp," V%d=%d ",Tvaraff[k],vlv); |
|
sprintf(gplotlabel+strlen(gplotlabel)," V%d=%d ",Tvaraff[k],vlv); |
} |
} |
for (k4=1; k4<= nsq; k4++){ /* For each selected (single) quantitative value */ |
for (k4=1; k4<= nsq; k4++){ /* For each selected (single) quantitative value */ |
fprintf(ficgp," V%d=%f ",Tvqresult[nres][k4],Tqresult[nres][k4]); |
fprintf(ficgp," V%d=%f ",Tvqresult[nres][k4],Tqresult[nres][k4]); |
|
sprintf(gplotlabel+strlen(gplotlabel)," V%d=%f ",Tvqresult[nres][k4],Tqresult[nres][k4]); |
} |
} |
|
strcpy(gplotlabel+strlen(gplotlabel),")"); |
fprintf(ficgp,"\n#\n"); |
fprintf(ficgp,"\n#\n"); |
if(invalidvarcomb[k1]){ |
if(invalidvarcomb[k1]){ |
fprintf(ficgp,"#Combination (%d) ignored because no cases \n",k1); |
fprintf(ficgp,"#Combination (%d) ignored because no cases \n",k1); |
Line 6933 set ter svg size 640, 480\nunset log y\n
|
Line 7008 set ter svg size 640, 480\nunset log y\n
|
} |
} |
|
|
fprintf(ficgp,"\nset out \"%s_%d-%d-%d.svg\" \n",subdirf2(optionfilefiname,"LIJT_"),cpt,k1,nres); |
fprintf(ficgp,"\nset out \"%s_%d-%d-%d.svg\" \n",subdirf2(optionfilefiname,"LIJT_"),cpt,k1,nres); |
|
fprintf(ficgp,"set label \"Alive state %d %s\" at graph 0.98,0.5 center rotate font \"Helvetica,12\"\n",cpt,gplotlabel); |
fprintf(ficgp,"set xlabel \"Age\" \nset ylabel \"Probability to be alive\" \n\ |
fprintf(ficgp,"set xlabel \"Age\" \nset ylabel \"Probability to be alive\" \n\ |
set ter svg size 640, 480\nunset log y\nplot [%.f:%.f] ", ageminpar, agemaxpar); |
set ter svg size 640, 480\nunset log y\nplot [%.f:%.f] ", ageminpar, agemaxpar); |
k=3; |
k=3; |
Line 6956 set ter svg size 640, 480\nunset log y\n
|
Line 7032 set ter svg size 640, 480\nunset log y\n
|
else |
else |
fprintf(ficgp,"$%d) t\"l(%d,.)\" w l",k+l,cpt); |
fprintf(ficgp,"$%d) t\"l(%d,.)\" w l",k+l,cpt); |
} |
} |
fprintf(ficgp,"\nset out\n"); |
fprintf(ficgp,"\nset out; unset label;\n"); |
} /* end cpt state*/ |
} /* end cpt state*/ |
} /* end covariate */ |
} /* end covariate */ |
} /* end nres */ |
} /* end nres */ |
Line 6968 set ter svg size 640, 480\nunset log y\n
|
Line 7044 set ter svg size 640, 480\nunset log y\n
|
if(m != 1 && TKresult[nres]!= k1) |
if(m != 1 && TKresult[nres]!= k1) |
continue; |
continue; |
for (cpt=1; cpt<=nlstate ; cpt ++) { /* For each life state of arrival */ |
for (cpt=1; cpt<=nlstate ; cpt ++) { /* For each life state of arrival */ |
|
strcpy(gplotlabel,"("); |
fprintf(ficgp,"\n#\n#\n#CV preval stable (period): 'pij' files, covariatecombination#=%d state=%d",k1, cpt); |
fprintf(ficgp,"\n#\n#\n#CV preval stable (period): 'pij' files, covariatecombination#=%d state=%d",k1, cpt); |
for (k=1; k<=cptcoveff; k++){ /* For each covariate and each value */ |
for (k=1; k<=cptcoveff; k++){ /* For each covariate and each value */ |
lv= decodtabm(k1,k,cptcoveff); /* Should be the covariate number corresponding to k1 combination */ |
lv= decodtabm(k1,k,cptcoveff); /* Should be the covariate number corresponding to k1 combination */ |
Line 6977 set ter svg size 640, 480\nunset log y\n
|
Line 7053 set ter svg size 640, 480\nunset log y\n
|
/* decodtabm(13,3,4)= 2 because h=13 k= 1 1 (2) 2 */ |
/* decodtabm(13,3,4)= 2 because h=13 k= 1 1 (2) 2 */ |
vlv= nbcode[Tvaraff[k]][lv]; |
vlv= nbcode[Tvaraff[k]][lv]; |
fprintf(ficgp," V%d=%d ",Tvaraff[k],vlv); |
fprintf(ficgp," V%d=%d ",Tvaraff[k],vlv); |
|
sprintf(gplotlabel+strlen(gplotlabel)," V%d=%d ",Tvaraff[k],vlv); |
} |
} |
for (k4=1; k4<= nsq; k4++){ /* For each selected (single) quantitative value */ |
for (k4=1; k4<= nsq; k4++){ /* For each selected (single) quantitative value */ |
fprintf(ficgp," V%d=%f ",Tvqresult[nres][k4],Tqresult[nres][k4]); |
fprintf(ficgp," V%d=%f ",Tvqresult[nres][k4],Tqresult[nres][k4]); |
|
sprintf(gplotlabel+strlen(gplotlabel)," V%d=%f ",Tvqresult[nres][k4],Tqresult[nres][k4]); |
} |
} |
|
strcpy(gplotlabel+strlen(gplotlabel),")"); |
fprintf(ficgp,"\n#\n"); |
fprintf(ficgp,"\n#\n"); |
if(invalidvarcomb[k1]){ |
if(invalidvarcomb[k1]){ |
fprintf(ficgp,"#Combination (%d) ignored because no cases \n",k1); |
fprintf(ficgp,"#Combination (%d) ignored because no cases \n",k1); |
Line 6988 set ter svg size 640, 480\nunset log y\n
|
Line 7067 set ter svg size 640, 480\nunset log y\n
|
} |
} |
|
|
fprintf(ficgp,"\nset out \"%s_%d-%d-%d.svg\" \n",subdirf2(optionfilefiname,"P_"),cpt,k1,nres); |
fprintf(ficgp,"\nset out \"%s_%d-%d-%d.svg\" \n",subdirf2(optionfilefiname,"P_"),cpt,k1,nres); |
|
fprintf(ficgp,"set label \"Alive state %d %s\" at graph 0.98,0.5 center rotate font \"Helvetica,12\"\n",cpt,gplotlabel); |
fprintf(ficgp,"set xlabel \"Age\" \nset ylabel \"Probability\" \n\ |
fprintf(ficgp,"set xlabel \"Age\" \nset ylabel \"Probability\" \n\ |
set ter svg size 640, 480\nunset log y\nplot [%.f:%.f] ", ageminpar, agemaxpar); |
set ter svg size 640, 480\nunset log y\nplot [%.f:%.f] ", ageminpar, agemaxpar); |
k=3; /* Offset */ |
k=3; /* Offset */ |
Line 7002 set ter svg size 640, 480\nunset log y\n
|
Line 7082 set ter svg size 640, 480\nunset log y\n
|
fprintf(ficgp,"+$%d",k+l+j-1); |
fprintf(ficgp,"+$%d",k+l+j-1); |
fprintf(ficgp,")) t \"prev(%d,%d)\" w l",i,cpt); |
fprintf(ficgp,")) t \"prev(%d,%d)\" w l",i,cpt); |
} /* nlstate */ |
} /* nlstate */ |
fprintf(ficgp,"\nset out\n"); |
fprintf(ficgp,"\nset out; unset label;\n"); |
} /* end cpt state*/ |
} /* end cpt state*/ |
} /* end covariate */ |
} /* end covariate */ |
|
|
Line 7015 set ter svg size 640, 480\nunset log y\n
|
Line 7095 set ter svg size 640, 480\nunset log y\n
|
if(m != 1 && TKresult[nres]!= k1) |
if(m != 1 && TKresult[nres]!= k1) |
continue; |
continue; |
for (cpt=1; cpt<=nlstate ; cpt ++) { /* For each life ending state */ |
for (cpt=1; cpt<=nlstate ; cpt ++) { /* For each life ending state */ |
fprintf(ficgp,"\n#\n#\n#CV Back preval stable (period): 'pijb' files, covariatecombination#=%d state=%d",k1, cpt); |
strcpy(gplotlabel,"("); |
|
fprintf(ficgp,"\n#\n#\n#CV Back preval stable (period): 'pijb' files, covariatecombination#=%d state=%d",k1, cpt); |
for (k=1; k<=cptcoveff; k++){ /* For each covariate and each value */ |
for (k=1; k<=cptcoveff; k++){ /* For each covariate and each value */ |
lv= decodtabm(k1,k,cptcoveff); /* Should be the covariate number corresponding to k1 combination */ |
lv= decodtabm(k1,k,cptcoveff); /* Should be the covariate number corresponding to k1 combination */ |
/* decodtabm(1,1,4) = 1 because h=1 k= (1) 1 1 1 */ |
/* decodtabm(1,1,4) = 1 because h=1 k= (1) 1 1 1 */ |
Line 7023 set ter svg size 640, 480\nunset log y\n
|
Line 7104 set ter svg size 640, 480\nunset log y\n
|
/* decodtabm(13,3,4)= 2 because h=13 k= 1 1 (2) 2 */ |
/* decodtabm(13,3,4)= 2 because h=13 k= 1 1 (2) 2 */ |
vlv= nbcode[Tvaraff[k]][lv]; |
vlv= nbcode[Tvaraff[k]][lv]; |
fprintf(ficgp," V%d=%d ",Tvaraff[k],vlv); |
fprintf(ficgp," V%d=%d ",Tvaraff[k],vlv); |
|
sprintf(gplotlabel+strlen(gplotlabel)," V%d=%d ",Tvaraff[k],vlv); |
} |
} |
for (k4=1; k4<= nsq; k4++){ /* For each selected (single) quantitative value */ |
for (k4=1; k4<= nsq; k4++){ /* For each selected (single) quantitative value */ |
fprintf(ficgp," V%d=%f ",Tvqresult[nres][k4],Tqresult[nres][k4]); |
fprintf(ficgp," V%d=%f ",Tvqresult[nres][k4],Tqresult[nres][k4]); |
|
sprintf(gplotlabel+strlen(gplotlabel)," V%d=%f ",Tvqresult[nres][k4],Tqresult[nres][k4]); |
} |
} |
|
strcpy(gplotlabel+strlen(gplotlabel),")"); |
fprintf(ficgp,"\n#\n"); |
fprintf(ficgp,"\n#\n"); |
if(invalidvarcomb[k1]){ |
if(invalidvarcomb[k1]){ |
fprintf(ficgp,"#Combination (%d) ignored because no cases \n",k1); |
fprintf(ficgp,"#Combination (%d) ignored because no cases \n",k1); |
Line 7034 set ter svg size 640, 480\nunset log y\n
|
Line 7118 set ter svg size 640, 480\nunset log y\n
|
} |
} |
|
|
fprintf(ficgp,"\nset out \"%s_%d-%d-%d.svg\" \n",subdirf2(optionfilefiname,"PB_"),cpt,k1,nres); |
fprintf(ficgp,"\nset out \"%s_%d-%d-%d.svg\" \n",subdirf2(optionfilefiname,"PB_"),cpt,k1,nres); |
|
fprintf(ficgp,"set label \"Ending alive state %d %s\" at graph 0.98,0.5 center rotate font \"Helvetica,12\"\n",cpt,gplotlabel); |
fprintf(ficgp,"set xlabel \"Age\" \nset ylabel \"Probability\" \n\ |
fprintf(ficgp,"set xlabel \"Age\" \nset ylabel \"Probability\" \n\ |
set ter svg size 640, 480\nunset log y\nplot [%.f:%.f] ", ageminpar, agemaxpar); |
set ter svg size 640, 480\nunset log y\nplot [%.f:%.f] ", ageminpar, agemaxpar); |
k=3; /* Offset */ |
k=3; /* Offset */ |
Line 7052 set ter svg size 640, 480\nunset log y\n
|
Line 7137 set ter svg size 640, 480\nunset log y\n
|
/* /\* fprintf(ficgp,"+$%d",k+l+j-1); *\/ */ |
/* /\* fprintf(ficgp,"+$%d",k+l+j-1); *\/ */ |
fprintf(ficgp,") t \"bprev(%d,%d)\" w l",i,cpt); |
fprintf(ficgp,") t \"bprev(%d,%d)\" w l",i,cpt); |
} /* nlstate */ |
} /* nlstate */ |
fprintf(ficgp,"\nset out\n"); |
fprintf(ficgp,"\nset out; unset label;\n"); |
} /* end cpt state*/ |
} /* end cpt state*/ |
} /* end covariate */ |
} /* end covariate */ |
} /* End if backcast */ |
} /* End if backcast */ |
Line 7066 set ter svg size 640, 480\nunset log y\n
|
Line 7151 set ter svg size 640, 480\nunset log y\n
|
if(m != 1 && TKresult[nres]!= k1) |
if(m != 1 && TKresult[nres]!= k1) |
continue; |
continue; |
for (cpt=1; cpt<=nlstate ; cpt ++) { /* For each life state */ |
for (cpt=1; cpt<=nlstate ; cpt ++) { /* For each life state */ |
|
strcpy(gplotlabel,"("); |
fprintf(ficgp,"\n#\n#\n#Projection of prevalence to stable (period): 'PROJ_' files, covariatecombination#=%d state=%d",k1, cpt); |
fprintf(ficgp,"\n#\n#\n#Projection of prevalence to stable (period): 'PROJ_' files, covariatecombination#=%d state=%d",k1, cpt); |
for (k=1; k<=cptcoveff; k++){ /* For each correspondig covariate value */ |
for (k=1; k<=cptcoveff; k++){ /* For each correspondig covariate value */ |
lv= decodtabm(k1,k,cptcoveff); /* Should be the covariate value corresponding to k1 combination and kth covariate */ |
lv= decodtabm(k1,k,cptcoveff); /* Should be the covariate value corresponding to k1 combination and kth covariate */ |
Line 7074 set ter svg size 640, 480\nunset log y\n
|
Line 7160 set ter svg size 640, 480\nunset log y\n
|
/* decodtabm(13,3,4)= 2 because h=13 k= 1 1 (2) 2 */ |
/* decodtabm(13,3,4)= 2 because h=13 k= 1 1 (2) 2 */ |
vlv= nbcode[Tvaraff[k]][lv]; |
vlv= nbcode[Tvaraff[k]][lv]; |
fprintf(ficgp," V%d=%d ",Tvaraff[k],vlv); |
fprintf(ficgp," V%d=%d ",Tvaraff[k],vlv); |
|
sprintf(gplotlabel+strlen(gplotlabel)," V%d=%d ",Tvaraff[k],vlv); |
} |
} |
for (k4=1; k4<= nsq; k4++){ /* For each selected (single) quantitative value */ |
for (k4=1; k4<= nsq; k4++){ /* For each selected (single) quantitative value */ |
fprintf(ficgp," V%d=%f ",Tvqresult[nres][k4],Tqresult[nres][k4]); |
fprintf(ficgp," V%d=%f ",Tvqresult[nres][k4],Tqresult[nres][k4]); |
|
sprintf(gplotlabel+strlen(gplotlabel)," V%d=%f ",Tvqresult[nres][k4],Tqresult[nres][k4]); |
} |
} |
|
strcpy(gplotlabel+strlen(gplotlabel),")"); |
fprintf(ficgp,"\n#\n"); |
fprintf(ficgp,"\n#\n"); |
if(invalidvarcomb[k1]){ |
if(invalidvarcomb[k1]){ |
fprintf(ficgp,"#Combination (%d) ignored because no cases \n",k1); |
fprintf(ficgp,"#Combination (%d) ignored because no cases \n",k1); |
Line 7086 set ter svg size 640, 480\nunset log y\n
|
Line 7175 set ter svg size 640, 480\nunset log y\n
|
|
|
fprintf(ficgp,"# hpijx=probability over h years, hp.jx is weighted by observed prev\n "); |
fprintf(ficgp,"# hpijx=probability over h years, hp.jx is weighted by observed prev\n "); |
fprintf(ficgp,"\nset out \"%s_%d-%d-%d.svg\" \n",subdirf2(optionfilefiname,"PROJ_"),cpt,k1,nres); |
fprintf(ficgp,"\nset out \"%s_%d-%d-%d.svg\" \n",subdirf2(optionfilefiname,"PROJ_"),cpt,k1,nres); |
|
fprintf(ficgp,"set label \"Alive state %d %s\" at graph 0.98,0.5 center rotate font \"Helvetica,12\"\n",cpt,gplotlabel); |
fprintf(ficgp,"set xlabel \"Age\" \nset ylabel \"Prevalence\" \n\ |
fprintf(ficgp,"set xlabel \"Age\" \nset ylabel \"Prevalence\" \n\ |
set ter svg size 640, 480\nunset log y\nplot [%.f:%.f] ", ageminpar, agemaxpar); |
set ter svg size 640, 480\nunset log y\nplot [%.f:%.f] ", ageminpar, agemaxpar); |
for (i=1; i<= nlstate+1 ; i ++){ /* nlstate +1 p11 p21 p.1 */ |
for (i=1; i<= nlstate+1 ; i ++){ /* nlstate +1 p11 p21 p.1 */ |
Line 7148 set ter svg size 640, 480\nunset log y\n
|
Line 7238 set ter svg size 640, 480\nunset log y\n
|
} |
} |
} /* end if covariate */ |
} /* end if covariate */ |
} /* nlstate */ |
} /* nlstate */ |
fprintf(ficgp,"\nset out\n"); |
fprintf(ficgp,"\nset out; unset label;\n"); |
} /* end cpt state*/ |
} /* end cpt state*/ |
} /* end covariate */ |
} /* end covariate */ |
} /* End if prevfcast */ |
} /* End if prevfcast */ |
Line 7191 set ter svg size 640, 480\nunset log y\n
|
Line 7281 set ter svg size 640, 480\nunset log y\n
|
fprintf(ficgp,"#Number of graphics: first is logit, 2nd is probabilities, third is incidences per year\n"); |
fprintf(ficgp,"#Number of graphics: first is logit, 2nd is probabilities, third is incidences per year\n"); |
fprintf(ficgp,"#model=%s \n",model); |
fprintf(ficgp,"#model=%s \n",model); |
fprintf(ficgp,"# Type of graphic ng=%d\n",ng); |
fprintf(ficgp,"# Type of graphic ng=%d\n",ng); |
fprintf(ficgp,"# jk=1 to 2^%d=%d\n",cptcoveff,m);/* to be checked */ |
fprintf(ficgp,"# k1=1 to 2^%d=%d\n",cptcoveff,m);/* to be checked */ |
for(jk=1; jk <=m; jk++) /* For each combination of covariate */ |
for(k1=1; k1 <=m; k1++) /* For each combination of covariate */ |
for(nres=1; nres <= nresult; nres++){ /* For each resultline */ |
for(nres=1; nres <= nresult; nres++){ /* For each resultline */ |
if(m != 1 && TKresult[nres]!= jk) |
if(m != 1 && TKresult[nres]!= k1) |
continue; |
continue; |
fprintf(ficgp,"# Combination of dummy jk=%d and ",jk); |
fprintf(ficgp,"\n\n# Combination of dummy k1=%d which is ",k1); |
|
strcpy(gplotlabel,"("); |
|
sprintf(gplotlabel+strlen(gplotlabel)," Dummy combination %d ",k1); |
|
for (k=1; k<=cptcoveff; k++){ /* For each correspondig covariate value */ |
|
lv= decodtabm(k1,k,cptcoveff); /* Should be the covariate value corresponding to k1 combination and kth covariate */ |
|
/* decodtabm(1,1,4) = 1 because h=1 k= (1) 1 1 1 */ |
|
/* decodtabm(1,2,4) = 1 because h=1 k= 1 (1) 1 1 */ |
|
/* decodtabm(13,3,4)= 2 because h=13 k= 1 1 (2) 2 */ |
|
vlv= nbcode[Tvaraff[k]][lv]; |
|
fprintf(ficgp," V%d=%d ",Tvaraff[k],vlv); |
|
sprintf(gplotlabel+strlen(gplotlabel)," V%d=%d ",Tvaraff[k],vlv); |
|
} |
for (k4=1; k4<= nsq; k4++){ /* For each selected (single) quantitative value */ |
for (k4=1; k4<= nsq; k4++){ /* For each selected (single) quantitative value */ |
fprintf(ficgp," V%d=%f ",Tvqresult[nres][k4],Tqresult[nres][k4]); |
fprintf(ficgp," V%d=%f ",Tvqresult[nres][k4],Tqresult[nres][k4]); |
|
sprintf(gplotlabel+strlen(gplotlabel)," V%d=%f ",Tvqresult[nres][k4],Tqresult[nres][k4]); |
} |
} |
|
strcpy(gplotlabel+strlen(gplotlabel),")"); |
fprintf(ficgp,"\n#\n"); |
fprintf(ficgp,"\n#\n"); |
fprintf(ficgp,"\nset out \"%s_%d-%d-%d.svg\" ",subdirf2(optionfilefiname,"PE_"),jk,ng,nres); |
fprintf(ficgp,"\nset out \"%s_%d-%d-%d.svg\" ",subdirf2(optionfilefiname,"PE_"),k1,ng,nres); |
|
fprintf(ficgp,"\nset label \"%s\" at graph 0.98,0.5 center rotate font \"Helvetica,12\"\n",gplotlabel); |
fprintf(ficgp,"\nset ter svg size 640, 480 "); |
fprintf(ficgp,"\nset ter svg size 640, 480 "); |
if (ng==1){ |
if (ng==1){ |
fprintf(ficgp,"\nset ylabel \"Value of the logit of the model\"\n"); /* exp(a12+b12*x) could be nice */ |
fprintf(ficgp,"\nset ylabel \"Value of the logit of the model\"\n"); /* exp(a12+b12*x) could be nice */ |
Line 7251 set ter svg size 640, 480\nunset log y\n
|
Line 7355 set ter svg size 640, 480\nunset log y\n
|
fprintf(ficgp,"+p%d*%d*x",i+j+2+nagesqr-1,Tinvresult[nres][Tvar[j]]);; |
fprintf(ficgp,"+p%d*%d*x",i+j+2+nagesqr-1,Tinvresult[nres][Tvar[j]]);; |
}else{ /* quantitative */ |
}else{ /* quantitative */ |
fprintf(ficgp,"+p%d*%f*x",i+j+2+nagesqr-1,Tqinvresult[nres][Tvar[j]]); /* Tqinvresult in decoderesult */ |
fprintf(ficgp,"+p%d*%f*x",i+j+2+nagesqr-1,Tqinvresult[nres][Tvar[j]]); /* Tqinvresult in decoderesult */ |
/* fprintf(ficgp,"+p%d*%d*x",i+j+nagesqr-1,nbcode[Tvar[j-2]][codtabm(jk,Tvar[j-2])]); */ |
/* fprintf(ficgp,"+p%d*%d*x",i+j+nagesqr-1,nbcode[Tvar[j-2]][codtabm(k1,Tvar[j-2])]); */ |
} |
} |
ij++; |
ij++; |
} |
} |
Line 7260 set ter svg size 640, 480\nunset log y\n
|
Line 7364 set ter svg size 640, 480\nunset log y\n
|
if(ijp <=cptcovprod) { /* Product */ |
if(ijp <=cptcovprod) { /* Product */ |
if(DummyV[Tvard[ijp][1]]==0){/* Vn is dummy */ |
if(DummyV[Tvard[ijp][1]]==0){/* Vn is dummy */ |
if(DummyV[Tvard[ijp][2]]==0){/* Vn and Vm are dummy */ |
if(DummyV[Tvard[ijp][2]]==0){/* Vn and Vm are dummy */ |
/* fprintf(ficgp,"+p%d*%d*%d",i+j+2+nagesqr-1,nbcode[Tvard[ijp][1]][codtabm(jk,j)],nbcode[Tvard[ijp][2]][codtabm(jk,j)]); */ |
/* fprintf(ficgp,"+p%d*%d*%d",i+j+2+nagesqr-1,nbcode[Tvard[ijp][1]][codtabm(k1,j)],nbcode[Tvard[ijp][2]][codtabm(k1,j)]); */ |
fprintf(ficgp,"+p%d*%d*%d",i+j+2+nagesqr-1,Tinvresult[nres][Tvard[ijp][1]],Tinvresult[nres][Tvard[ijp][2]]); |
fprintf(ficgp,"+p%d*%d*%d",i+j+2+nagesqr-1,Tinvresult[nres][Tvard[ijp][1]],Tinvresult[nres][Tvard[ijp][2]]); |
}else{ /* Vn is dummy and Vm is quanti */ |
}else{ /* Vn is dummy and Vm is quanti */ |
/* fprintf(ficgp,"+p%d*%d*%f",i+j+2+nagesqr-1,nbcode[Tvard[ijp][1]][codtabm(jk,j)],Tqinvresult[nres][Tvard[ijp][2]]); */ |
/* fprintf(ficgp,"+p%d*%d*%f",i+j+2+nagesqr-1,nbcode[Tvard[ijp][1]][codtabm(k1,j)],Tqinvresult[nres][Tvard[ijp][2]]); */ |
fprintf(ficgp,"+p%d*%d*%f",i+j+2+nagesqr-1,Tinvresult[nres][Tvard[ijp][1]],Tqinvresult[nres][Tvard[ijp][2]]); |
fprintf(ficgp,"+p%d*%d*%f",i+j+2+nagesqr-1,Tinvresult[nres][Tvard[ijp][1]],Tqinvresult[nres][Tvard[ijp][2]]); |
} |
} |
}else{ /* Vn*Vm Vn is quanti */ |
}else{ /* Vn*Vm Vn is quanti */ |
Line 7276 set ter svg size 640, 480\nunset log y\n
|
Line 7380 set ter svg size 640, 480\nunset log y\n
|
ijp++; |
ijp++; |
} |
} |
} else{ /* simple covariate */ |
} else{ /* simple covariate */ |
/* fprintf(ficgp,"+p%d*%d",i+j+2+nagesqr-1,nbcode[Tvar[j]][codtabm(jk,j)]); /\* Valgrind bug nbcode *\/ */ |
/* fprintf(ficgp,"+p%d*%d",i+j+2+nagesqr-1,nbcode[Tvar[j]][codtabm(k1,j)]); /\* Valgrind bug nbcode *\/ */ |
if(Dummy[j]==0){ |
if(Dummy[j]==0){ |
fprintf(ficgp,"+p%d*%d",i+j+2+nagesqr-1,Tinvresult[nres][Tvar[j]]); /* */ |
fprintf(ficgp,"+p%d*%d",i+j+2+nagesqr-1,Tinvresult[nres][Tvar[j]]); /* */ |
}else{ /* quantitative */ |
}else{ /* quantitative */ |
fprintf(ficgp,"+p%d*%f",i+j+2+nagesqr-1,Tqinvresult[nres][Tvar[j]]); /* */ |
fprintf(ficgp,"+p%d*%f",i+j+2+nagesqr-1,Tqinvresult[nres][Tvar[j]]); /* */ |
/* fprintf(ficgp,"+p%d*%d*x",i+j+nagesqr-1,nbcode[Tvar[j-2]][codtabm(jk,Tvar[j-2])]); */ |
/* fprintf(ficgp,"+p%d*%d*x",i+j+nagesqr-1,nbcode[Tvar[j-2]][codtabm(k1,Tvar[j-2])]); */ |
} |
} |
} /* end simple */ |
} /* end simple */ |
} /* end j */ |
} /* end j */ |
Line 7294 set ter svg size 640, 480\nunset log y\n
|
Line 7398 set ter svg size 640, 480\nunset log y\n
|
if(ng != 1){ |
if(ng != 1){ |
fprintf(ficgp,")/(1"); |
fprintf(ficgp,")/(1"); |
|
|
for(k1=1; k1 <=nlstate; k1++){ |
for(cpt=1; cpt <=nlstate; cpt++){ |
if(nagesqr==0) |
if(nagesqr==0) |
fprintf(ficgp,"+exp(p%d+p%d*x",k3+(k1-1)*ncovmodel,k3+(k1-1)*ncovmodel+1); |
fprintf(ficgp,"+exp(p%d+p%d*x",k3+(cpt-1)*ncovmodel,k3+(cpt-1)*ncovmodel+1); |
else /* nagesqr =1 */ |
else /* nagesqr =1 */ |
fprintf(ficgp,"+exp(p%d+p%d*x+p%d*x*x",k3+(k1-1)*ncovmodel,k3+(k1-1)*ncovmodel+1,k3+(k1-1)*ncovmodel+1+nagesqr); |
fprintf(ficgp,"+exp(p%d+p%d*x+p%d*x*x",k3+(cpt-1)*ncovmodel,k3+(cpt-1)*ncovmodel+1,k3+(cpt-1)*ncovmodel+1+nagesqr); |
|
|
ij=1; |
ij=1; |
for(j=3; j <=ncovmodel-nagesqr; j++){ |
for(j=3; j <=ncovmodel-nagesqr; j++){ |
if((j-2)==Tage[ij]) { /* Bug valgrind */ |
if((j-2)==Tage[ij]) { /* Bug valgrind */ |
if(ij <=cptcovage) { /* Bug valgrind */ |
if(ij <=cptcovage) { /* Bug valgrind */ |
fprintf(ficgp,"+p%d*%d*x",k3+(k1-1)*ncovmodel+1+j-2+nagesqr,nbcode[Tvar[j-2]][codtabm(jk,j-2)]); |
fprintf(ficgp,"+p%d*%d*x",k3+(cpt-1)*ncovmodel+1+j-2+nagesqr,nbcode[Tvar[j-2]][codtabm(k1,j-2)]); |
/* fprintf(ficgp,"+p%d*%d*x",k3+(k1-1)*ncovmodel+1+j-2+nagesqr,nbcode[Tvar[j-2]][codtabm(jk,Tvar[j-2])]); */ |
/* fprintf(ficgp,"+p%d*%d*x",k3+(cpt-1)*ncovmodel+1+j-2+nagesqr,nbcode[Tvar[j-2]][codtabm(k1,Tvar[j-2])]); */ |
ij++; |
ij++; |
} |
} |
} |
} |
else |
else |
fprintf(ficgp,"+p%d*%d",k3+(k1-1)*ncovmodel+1+j-2+nagesqr,nbcode[Tvar[j-2]][codtabm(jk,j-2)]);/* Valgrind bug nbcode */ |
fprintf(ficgp,"+p%d*%d",k3+(cpt-1)*ncovmodel+1+j-2+nagesqr,nbcode[Tvar[j-2]][codtabm(k1,j-2)]);/* Valgrind bug nbcode */ |
} |
} |
fprintf(ficgp,")"); |
fprintf(ficgp,")"); |
} |
} |
Line 7330 set ter svg size 640, 480\nunset log y\n
|
Line 7434 set ter svg size 640, 480\nunset log y\n
|
i=i+ncovmodel; |
i=i+ncovmodel; |
} /* end k */ |
} /* end k */ |
} /* end k2 */ |
} /* end k2 */ |
fprintf(ficgp,"\n set out\n"); |
fprintf(ficgp,"\n set out; unset label;\n"); |
} /* end jk */ |
} /* end k1 */ |
} /* end ng */ |
} /* end ng */ |
/* avoid: */ |
/* avoid: */ |
fflush(ficgp); |
fflush(ficgp); |
Line 9737 int hPijx(double *p, int bage, int fage)
|
Line 9841 int hPijx(double *p, int bage, int fage)
|
fprintf(ficrespijb," V%d=%f ",Tvqresult[nres][j],Tqresult[nres][j]); |
fprintf(ficrespijb," V%d=%f ",Tvqresult[nres][j],Tqresult[nres][j]); |
} |
} |
fprintf(ficrespijb,"******\n"); |
fprintf(ficrespijb,"******\n"); |
if(invalidvarcomb[k]){ |
if(invalidvarcomb[k]){ /* Is it necessary here? */ |
fprintf(ficrespijb,"\n#Combination (%d) ignored because no cases \n",k); |
fprintf(ficrespijb,"\n#Combination (%d) ignored because no cases \n",k); |
continue; |
continue; |
} |
} |