version 1.348, 2022/09/20 00:01:38
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version 1.356, 2023/05/23 12:08:43
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/* $Id$ |
/* $Id$ |
$State$ |
$State$ |
$Log$ |
$Log$ |
Revision 1.348 2022/09/20 00:01:38 brouard |
Revision 1.356 2023/05/23 12:08:43 brouard |
Summary: version 0.99r43 |
Summary: 0.99r46 |
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* imach.c (Module): Version 0.99r42 needed a newer version of |
* imach.c (Module): Fixed PROB_r |
Gnuplot. But newer version 0.99r43 should run with the Gnuplot |
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version 5.0 or 5.1 distributed with IMaCh. |
Revision 1.355 2023/05/22 17:03:18 brouard |
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Summary: 0.99r46 |
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* imach.c (Module): In the ILK....txt file, the number of columns |
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before the covariates values is dependent of the number of states (16+nlstate): 0.99r46 |
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Revision 1.354 2023/05/21 05:05:17 brouard |
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Summary: Temporary change for imachprax |
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Revision 1.353 2023/05/08 18:48:22 brouard |
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*** empty log message *** |
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Revision 1.352 2023/04/29 10:46:21 brouard |
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*** empty log message *** |
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Revision 1.351 2023/04/29 10:43:47 brouard |
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Summary: 099r45 |
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Revision 1.350 2023/04/24 11:38:06 brouard |
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*** empty log message *** |
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Revision 1.349 2023/01/31 09:19:37 brouard |
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Summary: Improvements in models with age*Vn*Vm |
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Revision 1.347 2022/09/18 14:36:44 brouard |
Revision 1.347 2022/09/18 14:36:44 brouard |
Summary: version 0.99r42 |
Summary: version 0.99r42 |
Line 1321 typedef struct {
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Line 1343 typedef struct {
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/* #include <libintl.h> */ |
/* #include <libintl.h> */ |
/* #define _(String) gettext (String) */ |
/* #define _(String) gettext (String) */ |
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#define MAXLINE 2048 /* Was 256 and 1024. Overflow with 312 with 2 states and 4 covariates. Should be ok */ |
#define MAXLINE 16384 /* Was 256 and 1024 and 2048. Overflow with 312 with 2 states and 4 covariates. Should be ok */ |
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#define GNUPLOTPROGRAM "gnuplot" |
#define GNUPLOTPROGRAM "gnuplot" |
#define GNUPLOTVERSION 5.1 |
#define GNUPLOTVERSION 5.1 |
Line 1332 double gnuplotversion=GNUPLOTVERSION;
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Line 1354 double gnuplotversion=GNUPLOTVERSION;
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#define GLOCK_ERROR_NOPATH -1 /* empty path */ |
#define GLOCK_ERROR_NOPATH -1 /* empty path */ |
#define GLOCK_ERROR_GETCWD -2 /* cannot get cwd */ |
#define GLOCK_ERROR_GETCWD -2 /* cannot get cwd */ |
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#define MAXPARM 128 /**< Maximum number of parameters for the optimization */ |
#define MAXPARM 216 /**< Maximum number of parameters for the optimization was 128 */ |
#define NPARMAX 64 /**< (nlstate+ndeath-1)*nlstate*ncovmodel */ |
#define NPARMAX 64 /**< (nlstate+ndeath-1)*nlstate*ncovmodel */ |
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#define NINTERVMAX 8 |
#define NINTERVMAX 8 |
Line 1366 double gnuplotversion=GNUPLOTVERSION;
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Line 1388 double gnuplotversion=GNUPLOTVERSION;
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/* $State$ */ |
/* $State$ */ |
#include "version.h" |
#include "version.h" |
char version[]=__IMACH_VERSION__; |
char version[]=__IMACH_VERSION__; |
char copyright[]="September 2022,INED-EUROREVES-Institut de longevite-Japan Society for the Promotion of Science (Grant-in-Aid for Scientific Research 25293121), Intel Software 2015-2020, Nihon University 2021-202, INED 2000-2022"; |
char copyright[]="April 2023,INED-EUROREVES-Institut de longevite-Japan Society for the Promotion of Science (Grant-in-Aid for Scientific Research 25293121), Intel Software 2015-2020, Nihon University 2021-202, INED 2000-2022"; |
char fullversion[]="$Revision$ $Date$"; |
char fullversion[]="$Revision$ $Date$"; |
char strstart[80]; |
char strstart[80]; |
char optionfilext[10], optionfilefiname[FILENAMELENGTH]; |
char optionfilext[10], optionfilefiname[FILENAMELENGTH]; |
Line 1380 int cptcovt=0; /**< cptcovt: total numbe
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Line 1402 int cptcovt=0; /**< cptcovt: total numbe
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int cptcovs=0; /**< cptcovs number of SIMPLE covariates in the model V2+V1 =2 (dummy or quantit or time varying) */ |
int cptcovs=0; /**< cptcovs number of SIMPLE covariates in the model V2+V1 =2 (dummy or quantit or time varying) */ |
int cptcovsnq=0; /**< cptcovsnq number of SIMPLE covariates in the model but non quantitative V2+V1 =2 */ |
int cptcovsnq=0; /**< cptcovsnq number of SIMPLE covariates in the model but non quantitative V2+V1 =2 */ |
int cptcovage=0; /**< Number of covariates with age: V3*age only =1 */ |
int cptcovage=0; /**< Number of covariates with age: V3*age only =1 */ |
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int cptcovprodage=0; /**< Number of fixed covariates with age: V3*age or V2*V3*age 1 */ |
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int cptcovprodvage=0; /**< Number of varying covariates with age: V7*age or V7*V6*age */ |
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int cptcovdageprod=0; /**< Number of doubleproducts with age, since 0.99r44 only: age*Vn*Vm for gnuplot printing*/ |
int cptcovprodnoage=0; /**< Number of covariate products without age */ |
int cptcovprodnoage=0; /**< Number of covariate products without age */ |
int cptcoveff=0; /* Total number of single dummy covariates (fixed or time varying) to vary for printing results (2**cptcoveff combinations of dummies)(computed in tricode as cptcov) */ |
int cptcoveff=0; /* Total number of single dummy covariates (fixed or time varying) to vary for printing results (2**cptcoveff combinations of dummies)(computed in tricode as cptcov) */ |
int ncovf=0; /* Total number of effective fixed covariates (dummy or quantitative) in the model */ |
int ncovf=0; /* Total number of effective fixed covariates (dummy or quantitative) in the model */ |
int ncovv=0; /* Total number of effective (wave) varying covariates (dummy or quantitative) in the model */ |
int ncovv=0; /* Total number of effective (wave) varying covariates (dummy or quantitative) in the model */ |
int ncovvt=0; /* Total number of effective (wave) varying covariates (dummy or quantitative or products [without age]) in the model */ |
int ncovvt=0; /* Total number of effective (wave) varying covariates (dummy or quantitative or products [without age]) in the model */ |
int ncova=0; /* Total number of effective (wave and stepm) varying with age covariates (dummy of quantitative) in the model */ |
int ncovvta=0; /* +age*V6 + age*V7+ age*V6*V3 +age*V7*V3 + age*V6*V4 +age*V7*V4 Total number of expandend products [with age]) in the model */ |
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int ncovta=0; /*age*V3*V2 +age*V2+agev3+ageV4 +age*V6 + age*V7+ age*V6*V3 +age*V7*V3 + age*V6*V4 +age*V7*V4 Total number of expandend products [with age]) in the model */ |
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int ncova=0; /* Total number of effective (wave and stepm) varying with age covariates (single or product, dummy or quantitative) in the model */ |
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int ncovva=0; /* +age*V6 + age*V7+ge*V6*V3 +age*V7*V3 + age*V6*V4 +age*V7*V4 Total number of effective (wave and stepm) varying with age covariates (single or product, dummy or quantitative) in the model */ |
int nsd=0; /**< Total number of single dummy variables (output) */ |
int nsd=0; /**< Total number of single dummy variables (output) */ |
int nsq=0; /**< Total number of single quantitative variables (output) */ |
int nsq=0; /**< Total number of single quantitative variables (output) */ |
int ncoveff=0; /* Total number of effective fixed dummy covariates in the model */ |
int ncoveff=0; /* Total number of effective fixed dummy covariates in the model */ |
Line 1472 extern time_t time();
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Line 1500 extern time_t time();
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struct tm start_time, end_time, curr_time, last_time, forecast_time; |
struct tm start_time, end_time, curr_time, last_time, forecast_time; |
time_t rstart_time, rend_time, rcurr_time, rlast_time, rforecast_time; /* raw time */ |
time_t rstart_time, rend_time, rcurr_time, rlast_time, rforecast_time; /* raw time */ |
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time_t rlast_btime; /* raw time */ |
struct tm tm; |
struct tm tm; |
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char strcurr[80], strfor[80]; |
char strcurr[80], strfor[80]; |
Line 1575 int **nbcode, *Tvar; /**< model=V2 => Tv
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Line 1604 int **nbcode, *Tvar; /**< model=V2 => Tv
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# States 1=Coresidence, 2 Living alone, 3 Institution |
# States 1=Coresidence, 2 Living alone, 3 Institution |
# V1=sex, V2=raedyrs Quant Fixed, State=livarnb4..livarnb11, V3=iadl4..iald11, V4=adlw4..adlw11, V5=r4bmi..r11bmi |
# V1=sex, V2=raedyrs Quant Fixed, State=livarnb4..livarnb11, V3=iadl4..iald11, V4=adlw4..adlw11, V5=r4bmi..r11bmi |
*/ |
*/ |
/* V5+V4+ V3+V4*V3 +V5*age+V2 +V1*V2+V1*age+V1 */ |
/* V5+V4+ V3+V4*V3 +V5*age+V2 +V1*V2+V1*age+V1+V4*V3*age */ |
/* kmodel 1 2 3 4 5 6 7 8 9 */ |
/* kmodel 1 2 3 4 5 6 7 8 9 10 */ |
/*Typevar[k]= 0 0 0 2 1 0 2 1 0 *//*0 for simple covariate (dummy, quantitative,*/ |
/*Typevar[k]= 0 0 0 2 1 0 2 1 0 3 *//*0 for simple covariate (dummy, quantitative,*/ |
/* fixed or varying), 1 for age product, 2 for*/ |
/* fixed or varying), 1 for age product, 2 for*/ |
/* product */ |
/* product without age, 3 for age and double product */ |
/*Dummy[k]= 1 0 0 1 3 1 1 2 0 *//*Dummy[k] 0=dummy (0 1), 1 quantitative */ |
/*Dummy[k]= 1 0 0 1 3 1 1 2 0 3 *//*Dummy[k] 0=dummy (0 1), 1 quantitative */ |
/*(single or product without age), 2 dummy*/ |
/*(single or product without age), 2 dummy*/ |
/* with age product, 3 quant with age product*/ |
/* with age product, 3 quant with age product*/ |
/*Tvar[k]= 5 4 3 6 5 2 7 1 1 */ |
/*Tvar[k]= 5 4 3 6 5 2 7 1 1 6 */ |
/* nsd 1 2 3 */ /* Counting single dummies covar fixed or tv */ |
/* nsd 1 2 3 */ /* Counting single dummies covar fixed or tv */ |
/*TnsdVar[Tvar] 1 2 3 */ |
/*TnsdVar[Tvar] 1 2 3 */ |
/*Tvaraff[nsd] 4 3 1 */ /* ID of single dummy cova fixed or timevary*/ |
/*Tvaraff[nsd] 4 3 1 */ /* ID of single dummy cova fixed or timevary*/ |
/*TvarsD[nsd] 4 3 1 */ /* ID of single dummy cova fixed or timevary*/ |
/*TvarsD[nsd] 4 3 1 */ /* ID of single dummy cova fixed or timevary*/ |
/*TvarsDind[nsd] 2 3 9 */ /* position K of single dummy cova */ |
/*TvarsDind[nsd] 2 3 9 */ /* position K of single dummy cova */ |
/* nsq 1 2 */ /* Counting single quantit tv */ |
/* nsq 1 2 */ /* Counting single quantit tv */ |
/* TvarsQ[k] 5 2 */ /* Number of single quantitative cova */ |
/* TvarsQ[k] 5 2 */ /* Number of single quantitative cova */ |
/* TvarsQind 1 6 */ /* position K of single quantitative cova */ |
/* TvarsQind 1 6 */ /* position K of single quantitative cova */ |
/* Tprod[i]=k 1 2 */ /* Position in model of the ith prod without age */ |
/* Tprod[i]=k 1 2 */ /* Position in model of the ith prod without age */ |
/* cptcovage 1 2 */ /* Counting cov*age in the model equation */ |
/* cptcovage 1 2 3 */ /* Counting cov*age in the model equation */ |
/* Tage[cptcovage]=k 5 8 */ /* Position in the model of ith cov*age */ |
/* Tage[cptcovage]=k 5 8 10 */ /* Position in the model of ith cov*age */ |
/* Tvard[1][1]@4={4,3,1,2} V4*V3 V1*V2 */ /* Position in model of the ith prod without age */ |
/* model="V2+V3+V4+V6+V7+V6*V2+V7*V2+V6*V3+V7*V3+V6*V4+V7*V4+age*V2+age*V3+age*V4+age*V6+age*V7+age*V6*V2+age*V6*V3+age*V7*V3+age*V6*V4+age*V7*V4\r"*/ |
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/* p Tvard[1][1]@21 = {6, 2, 7, 2, 6, 3, 7, 3, 6, 4, 7, 4, 0, 0, 0, 0, 0, 0, 0, 0, 0}*/ |
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/* p Tvard[2][1]@21 = {7, 2, 6, 3, 7, 3, 6, 4, 7, 4, 0 <repeats 11 times>} */ |
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/* p Tvardk[1][1]@24 = {0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 6, 2, 7, 2, 6, 3, 7, 3, 6, 4, 7, 4, 0, 0}*/ |
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/* p Tvardk[1][1]@22 = {0, 0, 0, 0, 0, 0, 0, 0, 6, 2, 7, 2, 6, 3, 7, 3, 6, 4, 7, 4, 0, 0} */ |
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/* Tvard[1][1]@4={4,3,1,2} V4*V3 V1*V2 */ /* Position in model of the ith prod without age */ |
/* Tvardk[4][1]=4;Tvardk[4][2]=3;Tvardk[7][1]=1;Tvardk[7][2]=2 */ /* Variables of a prod at position in the model equation*/ |
/* Tvardk[4][1]=4;Tvardk[4][2]=3;Tvardk[7][1]=1;Tvardk[7][2]=2 */ /* Variables of a prod at position in the model equation*/ |
/* TvarF TvarF[1]=Tvar[6]=2, TvarF[2]=Tvar[7]=7, TvarF[3]=Tvar[9]=1 ID of fixed covariates or product V2, V1*V2, V1 */ |
/* TvarF TvarF[1]=Tvar[6]=2, TvarF[2]=Tvar[7]=7, TvarF[3]=Tvar[9]=1 ID of fixed covariates or product V2, V1*V2, V1 */ |
/* TvarFind; TvarFind[1]=6, TvarFind[2]=7, TvarFind[3]=9 *//* Inverse V2(6) is first fixed (single or prod) */ |
/* TvarFind; TvarFind[1]=6, TvarFind[2]=7, TvarFind[3]=9 *//* Inverse V2(6) is first fixed (single or prod) */ |
Line 1645 int *TvarVQ; /* TvarVQ[1]=V5 in V5+V4+V3
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Line 1679 int *TvarVQ; /* TvarVQ[1]=V5 in V5+V4+V3
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int *TvarVQind; /* TvarVQind[1]=1 in V5+V4+V3+V4*V3+V5*age+V2+V1*V2+V1*age+V1 */ /* Only simple time varying quantitative variable */ |
int *TvarVQind; /* TvarVQind[1]=1 in V5+V4+V3+V4*V3+V5*age+V2+V1*V2+V1*age+V1 */ /* Only simple time varying quantitative variable */ |
int *TvarVV; /* We count ncovvt time varying covariates (single or products without age) and put their name into TvarVV */ |
int *TvarVV; /* We count ncovvt time varying covariates (single or products without age) and put their name into TvarVV */ |
int *TvarVVind; /* We count ncovvt time varying covariates (single or products without age) and put their name into TvarVV */ |
int *TvarVVind; /* We count ncovvt time varying covariates (single or products without age) and put their name into TvarVV */ |
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int *TvarVVA; /* We count ncovvt time varying covariates (single or products with age) and put their name into TvarVVA */ |
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int *TvarVVAind; /* We count ncovvt time varying covariates (single or products without age) and put their name into TvarVV */ |
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int *TvarAVVA; /* We count ALL ncovta time varying covariates (single or products with age) and put their name into TvarVVA */ |
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int *TvarAVVAind; /* We count ALL ncovta time varying covariates (single or products without age) and put their name into TvarVV */ |
/*# ID V1 V2 weight birth death 1st s1 V3 V4 V5 2nd s2 */ |
/*# ID V1 V2 weight birth death 1st s1 V3 V4 V5 2nd s2 */ |
/* model V1+V3+age*V1+age*V3+V1*V3 */ |
/* model V1+V3+age*V1+age*V3+V1*V3 + V1*V3*age */ |
/* Tvar={1, 3, 1, 3, 6}, the 6 comes from the fact that there are already V1, V2, V3, V4, V5 native covariates */ |
/* Tvar={1, 3, 1, 3, 6, 6}, the 6 comes from the fact that there are already V1, V2, V3, V4, V5 native covariates */ |
/* TvarVV={3,1,3}, for V3 and then the product V1*V3 is decomposed into V1 and V3 */ |
/* TvarVV={3,1,3,1,3}, for V3 and then the product V1*V3 is decomposed into V1 and V3 */ |
/* TvarVVind={2,5,5}, for V3 and then the product V1*V3 is decomposed into V1 and V3 */ |
/* TvarVVind={2,5,5,6,6}, for V3 and then the product V1*V3 is decomposed into V1 and V3 and V1*V3*age into 6,6 */ |
int *Tvarsel; /**< Selected covariates for output */ |
int *Tvarsel; /**< Selected covariates for output */ |
double *Tvalsel; /**< Selected modality value of covariate for output */ |
double *Tvalsel; /**< Selected modality value of covariate for output */ |
int *Typevar; /**< 0 for simple covariate (dummy, quantitative, fixed or varying), 1 for age product, 2 for product */ |
int *Typevar; /**< 0 for simple covariate (dummy, quantitative, fixed or varying), 1 for age product, 2 for product, 3 age*Vn*Vm */ |
int *Fixed; /** Fixed[k] 0=fixed, 1 varying, 2 fixed with age product, 3 varying with age product */ |
int *Fixed; /** Fixed[k] 0=fixed, 1 varying, 2 fixed with age product, 3 varying with age product */ |
int *Dummy; /** Dummy[k] 0=dummy (0 1), 1 quantitative (single or product without age), 2 dummy with age product, 3 quant with age product */ |
int *Dummy; /** Dummy[k] 0=dummy (0 1), 1 quantitative (single or product without age), 2 dummy with age product, 3 quant with age product */ |
int *DummyV; /** Dummy[v] 0=dummy (0 1), 1 quantitative */ |
int *DummyV; /** Dummy[v] 0=dummy (0 1), 1 quantitative */ |
Line 1789 char *trimbb(char *out, char *in)
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Line 1827 char *trimbb(char *out, char *in)
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return s; |
return s; |
} |
} |
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char *trimbtab(char *out, char *in) |
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{ /* Trim blanks or tabs in line but keeps first blanks if line starts with blanks */ |
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char *s; |
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s=out; |
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while (*in != '\0'){ |
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while( (*in == ' ' || *in == '\t')){ /* && *(in+1) != '\0'){*/ |
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in++; |
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} |
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*out++ = *in++; |
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} |
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*out='\0'; |
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return s; |
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} |
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/* char *substrchaine(char *out, char *in, char *chain) */ |
/* char *substrchaine(char *out, char *in, char *chain) */ |
/* { */ |
/* { */ |
/* /\* Substract chain 'chain' from 'in', return and output 'out' *\/ */ |
/* /\* Substract chain 'chain' from 'in', return and output 'out' *\/ */ |
Line 1815 char *trimbb(char *out, char *in)
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Line 1867 char *trimbb(char *out, char *in)
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char *substrchaine(char *out, char *in, char *chain) |
char *substrchaine(char *out, char *in, char *chain) |
{ |
{ |
/* Substract chain 'chain' from 'in', return and output 'out' */ |
/* Substract chain 'chain' from 'in', return and output 'out' */ |
/* in="V1+V1*age+age*age+V2", chain="age*age" */ |
/* in="V1+V1*age+age*age+V2", chain="+age*age" out="V1+V1*age+V2" */ |
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char *strloc; |
char *strloc; |
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strcpy (out, in); |
strcpy (out, in); /* out="V1+V1*age+age*age+V2" */ |
strloc = strstr(out, chain); /* strloc points to out at age*age+V2 */ |
strloc = strstr(out, chain); /* strloc points to out at "+age*age+V2" */ |
printf("Bef strloc=%s chain=%s out=%s \n", strloc, chain, out); |
printf("Bef strloc=%s chain=%s out=%s \n", strloc, chain, out); /* strloc=+age*age+V2 chain="+age*age", out="V1+V1*age+age*age+V2" */ |
if(strloc != NULL){ |
if(strloc != NULL){ |
/* will affect out */ /* strloc+strlenc(chain)=+V2 */ /* Will also work in Unicode */ |
/* will affect out */ /* strloc+strlen(chain)=|+V2 = "V1+V1*age+age*age|+V2" */ /* Will also work in Unicodek */ |
memmove(strloc,strloc+strlen(chain), strlen(strloc+strlen(chain))+1); |
memmove(strloc,strloc+strlen(chain), strlen(strloc+strlen(chain))+1); /* move number of bytes corresponding to the length of "+V2" which is 3, plus one is 4 (including the null)*/ |
/* strcpy (strloc, strloc +strlen(chain));*/ |
/* equivalent to strcpy (strloc, strloc +strlen(chain)) if no overlap; Copies from "+V2" to V1+V1*age+ */ |
} |
} |
printf("Aft strloc=%s chain=%s in=%s out=%s \n", strloc, chain, in, out); |
printf("Aft strloc=%s chain=%s in=%s out=%s \n", strloc, chain, in, out); /* strloc=+V2 chain="+age*age", in="V1+V1*age+age*age+V2", out="V1+V1*age+V2" */ |
return out; |
return out; |
} |
} |
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Line 1835 char *substrchaine(char *out, char *in,
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Line 1887 char *substrchaine(char *out, char *in,
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char *cutl(char *blocc, char *alocc, char *in, char occ) |
char *cutl(char *blocc, char *alocc, char *in, char occ) |
{ |
{ |
/* cuts string in into blocc and alocc where blocc ends before FIRST occurence of char 'occ' |
/* cuts string in into blocc and alocc where blocc ends before FIRST occurence of char 'occ' |
and alocc starts after first occurence of char 'occ' : ex cutv(blocc,alocc,"abcdef2ghi2j",'2') |
and alocc starts after first occurence of char 'occ' : ex cutl(blocc,alocc,"abcdef2ghi2j",'2') |
gives alocc="abcdef" and blocc="ghi2j". |
gives alocc="abcdef" and blocc="ghi2j". |
If occ is not found blocc is null and alocc is equal to in. Returns blocc |
If occ is not found blocc is null and alocc is equal to in. Returns blocc |
*/ |
*/ |
Line 1901 int nbocc(char *s, char occ)
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Line 1953 int nbocc(char *s, char occ)
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return j; |
return j; |
} |
} |
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int nboccstr(char *textin, char *chain) |
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{ |
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/* Counts the number of occurence of "chain" in string textin */ |
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/* in="+V7*V4+age*V2+age*V3+age*V4" chain="age" */ |
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char *strloc; |
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int i,j=0; |
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i=0; |
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strloc=textin; /* strloc points to "^+V7*V4+age+..." in textin */ |
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for(;;) { |
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strloc= strstr(strloc,chain); /* strloc points to first character of chain in textin if found. Example strloc points^ to "+V7*V4+^age" in textin */ |
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if(strloc != NULL){ |
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strloc = strloc+strlen(chain); /* strloc points to "+V7*V4+age^" in textin */ |
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j++; |
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}else |
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break; |
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} |
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return j; |
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} |
/* void cutv(char *u,char *v, char*t, char occ) */ |
/* void cutv(char *u,char *v, char*t, char occ) */ |
/* { */ |
/* { */ |
/* /\* cuts string t into u and v where u ends before last occurence of char 'occ' */ |
/* /\* cuts string t into u and v where u ends before last occurence of char 'occ' */ |
Line 2580 void powell(double p[], double **xi, int
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Line 2654 void powell(double p[], double **xi, int
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double fp,fptt; |
double fp,fptt; |
double *xits; |
double *xits; |
int niterf, itmp; |
int niterf, itmp; |
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int Bigter=0, nBigterf=1; |
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pt=vector(1,n); |
pt=vector(1,n); |
ptt=vector(1,n); |
ptt=vector(1,n); |
xit=vector(1,n); |
xit=vector(1,n); |
Line 2593 void powell(double p[], double **xi, int
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Line 2668 void powell(double p[], double **xi, int
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ibig=0; |
ibig=0; |
del=0.0; |
del=0.0; |
rlast_time=rcurr_time; |
rlast_time=rcurr_time; |
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rlast_btime=rcurr_time; |
/* (void) gettimeofday(&curr_time,&tzp); */ |
/* (void) gettimeofday(&curr_time,&tzp); */ |
rcurr_time = time(NULL); |
rcurr_time = time(NULL); |
curr_time = *localtime(&rcurr_time); |
curr_time = *localtime(&rcurr_time); |
/* printf("\nPowell iter=%d -2*LL=%.12f gain=%.12f=%.3g %ld sec. %ld sec.",*iter,*fret, fp-*fret,fp-*fret, rcurr_time-rlast_time, rcurr_time-rstart_time);fflush(stdout); */ |
/* printf("\nPowell iter=%d -2*LL=%.12f gain=%.12f=%.3g %ld sec. %ld sec.",*iter,*fret, fp-*fret,fp-*fret, rcurr_time-rlast_time, rcurr_time-rstart_time);fflush(stdout); */ |
/* fprintf(ficlog,"\nPowell iter=%d -2*LL=%.12f gain=%.12f=%.3g %ld sec. %ld sec.",*iter,*fret, fp-*fret,fp-*fret,rcurr_time-rlast_time, rcurr_time-rstart_time); fflush(ficlog); */ |
/* fprintf(ficlog,"\nPowell iter=%d -2*LL=%.12f gain=%.12f=%.3g %ld sec. %ld sec.",*iter,*fret, fp-*fret,fp-*fret,rcurr_time-rlast_time, rcurr_time-rstart_time); fflush(ficlog); */ |
printf("\nPowell iter=%d -2*LL=%.12f gain=%.3lg %ld sec. %ld sec.",*iter,*fret,fp-*fret, rcurr_time-rlast_time, rcurr_time-rstart_time);fflush(stdout); |
Bigter=(*iter - *iter % ncovmodel)/ncovmodel +1; /* Big iteration, i.e on ncovmodel cycle */ |
fprintf(ficlog,"\nPowell iter=%d -2*LL=%.12f gain=%.3lg %ld sec. %ld sec.",*iter,*fret,fp-*fret,rcurr_time-rlast_time, rcurr_time-rstart_time); fflush(ficlog); |
printf("\nPowell iter=%d Big Iter=%d -2*LL=%.12f gain=%.3lg %ld sec. %ld sec.",*iter,Bigter,*fret,fp-*fret, rcurr_time-rlast_time, rcurr_time-rstart_time);fflush(stdout); |
/* fprintf(ficrespow,"%d %.12f %ld",*iter,*fret,curr_time.tm_sec-start_time.tm_sec); */ |
fprintf(ficlog,"\nPowell iter=%d Big Iter=%d -2*LL=%.12f gain=%.3lg %ld sec. %ld sec.",*iter,Bigter,*fret,fp-*fret,rcurr_time-rlast_time, rcurr_time-rstart_time); fflush(ficlog); |
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fprintf(ficrespow,"%d %d %.12f %d",*iter,Bigter, *fret,curr_time.tm_sec-start_time.tm_sec); |
fp=(*fret); /* From former iteration or initial value */ |
fp=(*fret); /* From former iteration or initial value */ |
for (i=1;i<=n;i++) { |
for (i=1;i<=n;i++) { |
fprintf(ficrespow," %.12lf", p[i]); |
fprintf(ficrespow," %.12lf", p[i]); |
Line 2622 void powell(double p[], double **xi, int
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Line 2699 void powell(double p[], double **xi, int
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}else if(Typevar[j]==2) { |
}else if(Typevar[j]==2) { |
printf(" + V%d*V%d ",Tvard[Tposprod[j]][1],Tvard[Tposprod[j]][2]); |
printf(" + V%d*V%d ",Tvard[Tposprod[j]][1],Tvard[Tposprod[j]][2]); |
fprintf(ficlog," + V%d*V%d ",Tvard[Tposprod[j]][1],Tvard[Tposprod[j]][2]); |
fprintf(ficlog," + V%d*V%d ",Tvard[Tposprod[j]][1],Tvard[Tposprod[j]][2]); |
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}else if(Typevar[j]==3) { |
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printf(" + V%d*V%d*age ",Tvard[Tposprod[j]][1],Tvard[Tposprod[j]][2]); |
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fprintf(ficlog," + V%d*V%d*age ",Tvard[Tposprod[j]][1],Tvard[Tposprod[j]][2]); |
} |
} |
} |
} |
printf("\n"); |
printf("\n"); |
Line 2652 void powell(double p[], double **xi, int
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Line 2732 void powell(double p[], double **xi, int
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strcurr[itmp-1]='\0'; |
strcurr[itmp-1]='\0'; |
printf("\nConsidering the time needed for the last iteration #%d: %ld seconds,\n",*iter,rcurr_time-rlast_time); |
printf("\nConsidering the time needed for the last iteration #%d: %ld seconds,\n",*iter,rcurr_time-rlast_time); |
fprintf(ficlog,"\nConsidering the time needed for this last iteration #%d: %ld seconds,\n",*iter,rcurr_time-rlast_time); |
fprintf(ficlog,"\nConsidering the time needed for this last iteration #%d: %ld seconds,\n",*iter,rcurr_time-rlast_time); |
for(niterf=10;niterf<=30;niterf+=10){ |
for(nBigterf=1;nBigterf<=31;nBigterf+=10){ |
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niterf=nBigterf*ncovmodel; |
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/* rforecast_time=rcurr_time+(niterf-*iter)*(rcurr_time-rlast_time); */ |
rforecast_time=rcurr_time+(niterf-*iter)*(rcurr_time-rlast_time); |
rforecast_time=rcurr_time+(niterf-*iter)*(rcurr_time-rlast_time); |
forecast_time = *localtime(&rforecast_time); |
forecast_time = *localtime(&rforecast_time); |
strcpy(strfor,asctime(&forecast_time)); |
strcpy(strfor,asctime(&forecast_time)); |
itmp = strlen(strfor); |
itmp = strlen(strfor); |
if(strfor[itmp-1]=='\n') |
if(strfor[itmp-1]=='\n') |
strfor[itmp-1]='\0'; |
strfor[itmp-1]='\0'; |
printf(" - if your program needs %d iterations to converge, convergence will be \n reached in %s i.e.\n on %s (current time is %s);\n",niterf, asc_diff_time(rforecast_time-rcurr_time,tmpout),strfor,strcurr); |
printf(" - if your program needs %d BIG iterations (%d iterations) to converge, convergence will be \n reached in %s i.e.\n on %s (current time is %s);\n",nBigterf, niterf, asc_diff_time(rforecast_time-rcurr_time,tmpout),strfor,strcurr); |
fprintf(ficlog," - if your program needs %d iterations to converge, convergence will be \n reached in %s i.e.\n on %s (current time is %s);\n",niterf, asc_diff_time(rforecast_time-rcurr_time,tmpout),strfor,strcurr); |
fprintf(ficlog," - if your program needs %d BIG iterations (%d iterations) to converge, convergence will be \n reached in %s i.e.\n on %s (current time is %s);\n",nBigterf, niterf, asc_diff_time(rforecast_time-rcurr_time,tmpout),strfor,strcurr); |
} |
} |
} |
} |
for (i=1;i<=n;i++) { /* For each direction i */ |
for (i=1;i<=n;i++) { /* For each direction i */ |
Line 2961 void powell(double p[], double **xi, int
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Line 3043 void powell(double p[], double **xi, int
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/* Model(2) V1 + V2 + V3 + V8 + V7*V8 + V5*V6 + V8*age + V3*age + age*age */ |
/* Model(2) V1 + V2 + V3 + V8 + V7*V8 + V5*V6 + V8*age + V3*age + age*age */ |
/* total number of covariates of the model nbocc(+)+1 = 8 excepting constant and age and age*age */ |
/* total number of covariates of the model nbocc(+)+1 = 8 excepting constant and age and age*age */ |
for(k1=1;k1<=cptcovt;k1++){ /* loop on model equation (including products) */ |
for(k1=1;k1<=cptcovt;k1++){ /* loop on model equation (including products) */ |
if(Typevar[k1]==1){ /* A product with age */ |
if(Typevar[k1]==1 || Typevar[k1]==3){ /* A product with age */ |
cov[2+nagesqr+k1]=precov[nres][k1]*cov[2]; |
cov[2+nagesqr+k1]=precov[nres][k1]*cov[2]; |
}else{ |
}else{ |
cov[2+nagesqr+k1]=precov[nres][k1]; |
cov[2+nagesqr+k1]=precov[nres][k1]; |
Line 3171 void powell(double p[], double **xi, int
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Line 3253 void powell(double p[], double **xi, int
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cov[3]= agefin*agefin;; |
cov[3]= agefin*agefin;; |
} |
} |
for(k1=1;k1<=cptcovt;k1++){ /* loop on model equation (including products) */ |
for(k1=1;k1<=cptcovt;k1++){ /* loop on model equation (including products) */ |
if(Typevar[k1]==1){ /* A product with age */ |
if(Typevar[k1]==1 || Typevar[k1]==3){ /* A product with age */ |
cov[2+nagesqr+k1]=precov[nres][k1]*cov[2]; |
cov[2+nagesqr+k1]=precov[nres][k1]*cov[2]; |
}else{ |
}else{ |
cov[2+nagesqr+k1]=precov[nres][k1]; |
cov[2+nagesqr+k1]=precov[nres][k1]; |
Line 3638 double ***hpxij(double ***po, int nhstep
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Line 3720 double ***hpxij(double ***po, int nhstep
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/* Model(2) V1 + V2 + V3 + V8 + V7*V8 + V5*V6 + V8*age + V3*age + age*age */ |
/* Model(2) V1 + V2 + V3 + V8 + V7*V8 + V5*V6 + V8*age + V3*age + age*age */ |
/* total number of covariates of the model nbocc(+)+1 = 8 excepting constant and age and age*age */ |
/* total number of covariates of the model nbocc(+)+1 = 8 excepting constant and age and age*age */ |
for(k1=1;k1<=cptcovt;k1++){ /* loop on model equation (including products) */ |
for(k1=1;k1<=cptcovt;k1++){ /* loop on model equation (including products) */ |
if(Typevar[k1]==1){ /* A product with age */ |
if(Typevar[k1]==1 || Typevar[k1]==3){ /* A product with age */ |
cov[2+nagesqr+k1]=precov[nres][k1]*cov[2]; |
cov[2+nagesqr+k1]=precov[nres][k1]*cov[2]; |
}else{ |
}else{ |
cov[2+nagesqr+k1]=precov[nres][k1]; |
cov[2+nagesqr+k1]=precov[nres][k1]; |
Line 3824 double ***hbxij(double ***po, int nhstep
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Line 3906 double ***hbxij(double ***po, int nhstep
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} |
} |
/** New code */ |
/** New code */ |
for(k1=1;k1<=cptcovt;k1++){ /* loop on model equation (including products) */ |
for(k1=1;k1<=cptcovt;k1++){ /* loop on model equation (including products) */ |
if(Typevar[k1]==1){ /* A product with age */ |
if(Typevar[k1]==1 || Typevar[k1]==3){ /* A product with age */ |
cov[2+nagesqr+k1]=precov[nres][k1]*cov[2]; |
cov[2+nagesqr+k1]=precov[nres][k1]*cov[2]; |
}else{ |
}else{ |
cov[2+nagesqr+k1]=precov[nres][k1]; |
cov[2+nagesqr+k1]=precov[nres][k1]; |
Line 4009 double func( double *x)
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Line 4091 double func( double *x)
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iposold=ipos; |
iposold=ipos; |
cov[ioffset+ipos]=cotvarv; |
cov[ioffset+ipos]=cotvarv; |
} |
} |
/* for(itv=1; itv <= ntveff; itv++){ /\* Varying dummy covariates (single??)*\/ */ |
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/* iv= Tvar[Tmodelind[ioffset-2-nagesqr-cptcovage+itv]]-ncovcol-nqv; /\* Counting the # varying covariate from 1 to ntveff *\/ */ |
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/* cov[ioffset+iv]=cotvar[mw[mi][i]][iv][i]; */ |
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/* k=ioffset-2-nagesqr-cptcovage+itv; /\* position in simple model *\/ */ |
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/* cov[ioffset+itv]=cotvar[mw[mi][i]][TmodelInvind[itv]][i]; */ |
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/* printf(" i=%d,mi=%d,itv=%d,TmodelInvind[itv]=%d,cotvar[mw[mi][i]][TmodelInvind[itv]][i]=%f\n", i, mi, itv, TmodelInvind[itv],cotvar[mw[mi][i]][TmodelInvind[itv]][i]); */ |
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/* } */ |
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/* for(iqtv=1; iqtv <= nqtveff; iqtv++){ /\* Varying quantitatives covariates *\/ */ |
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/* iv=TmodelInvQind[iqtv]; /\* Counting the # varying covariate from 1 to ntveff *\/ */ |
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/* /\* printf(" i=%d,mi=%d,iqtv=%d,TmodelInvQind[iqtv]=%d,cotqvar[mw[mi][i]][TmodelInvQind[iqtv]][i]=%f\n", i, mi, iqtv, TmodelInvQind[iqtv],cotqvar[mw[mi][i]][TmodelInvQind[iqtv]][i]); *\/ */ |
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/* cov[ioffset+ntveff+iqtv]=cotqvar[mw[mi][i]][TmodelInvQind[iqtv]][i]; */ |
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/* } */ |
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/* for products of time varying to be done */ |
/* for products of time varying to be done */ |
for (ii=1;ii<=nlstate+ndeath;ii++) |
for (ii=1;ii<=nlstate+ndeath;ii++) |
for (j=1;j<=nlstate+ndeath;j++){ |
for (j=1;j<=nlstate+ndeath;j++){ |
Line 4036 double func( double *x)
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Line 4106 double func( double *x)
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cov[2]=agexact; |
cov[2]=agexact; |
if(nagesqr==1) |
if(nagesqr==1) |
cov[3]= agexact*agexact; /* Should be changed here */ |
cov[3]= agexact*agexact; /* Should be changed here */ |
for (kk=1; kk<=cptcovage;kk++) { |
/* for (kk=1; kk<=cptcovage;kk++) { */ |
if(!FixedV[Tvar[Tage[kk]]]) |
/* if(!FixedV[Tvar[Tage[kk]]]) */ |
cov[Tage[kk]+2+nagesqr]=covar[Tvar[Tage[kk]]][i]*agexact; /* Tage[kk] gives the data-covariate associated with age */ |
/* cov[Tage[kk]+2+nagesqr]=covar[Tvar[Tage[kk]]][i]*agexact; /\* Tage[kk] gives the data-covariate associated with age *\/ */ |
else |
/* else */ |
cov[Tage[kk]+2+nagesqr]=cotvar[mw[mi][i]][Tvar[Tage[kk]]][i]*agexact; /* because cotvar starts now at first ncovcol+nqv+ (1 to nqtv) */ |
/* cov[Tage[kk]+2+nagesqr]=cotvar[mw[mi][i]][Tvar[Tage[kk]]][i]*agexact; /\* because cotvar starts now at first ncovcol+nqv+ (1 to nqtv) *\/ */ |
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/* } */ |
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for(ncovva=1, iposold=0; ncovva <= ncovta ; ncovva++){ /* Time varying covariates with age including individual from products, product is computed dynamically */ |
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itv=TvarAVVA[ncovva]; /* TvarVV={3, 1, 3} gives the name of each varying covariate, exploding product Vn*Vm into Vn and then Vm */ |
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ipos=TvarAVVAind[ncovva]; /* TvarVVind={2, 5, 5] gives the position in the model of the ncovv th varying covariate*/ |
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if(FixedV[itv]!=0){ /* Not a fixed covariate? Could be a fixed covariate of a product with a higher than ncovcol+nqv, itv */ |
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cotvarv=cotvar[mw[mi][i]][TvarAVVA[ncovva]][i]; /* because cotvar starts now at first ncovcol+nqv+ntv+nqtv (1 to nqtv) */ |
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}else{ /* fixed covariate */ |
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cotvarv=covar[itv][i]; /* Error: TvarFind gives the name, that is the true column of fixed covariates, but Tvar of the model */ |
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} |
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if(ipos!=iposold){ /* Not a product or first of a product */ |
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cotvarvold=cotvarv; |
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}else{ /* A second product */ |
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cotvarv=cotvarv*cotvarvold; |
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} |
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iposold=ipos; |
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cov[ioffset+ipos]=cotvarv*agexact; |
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/* For products */ |
} |
} |
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out=matprod2(newm,oldm,1,nlstate+ndeath,1,nlstate+ndeath, |
out=matprod2(newm,oldm,1,nlstate+ndeath,1,nlstate+ndeath, |
1,nlstate+ndeath,pmij(pmmij,cov,ncovmodel,x,nlstate)); |
1,nlstate+ndeath,pmij(pmmij,cov,ncovmodel,x,nlstate)); |
savm=oldm; |
savm=oldm; |
Line 4310 double func( double *x)
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Line 4398 double func( double *x)
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double funcone( double *x) |
double funcone( double *x) |
{ |
{ |
/* Same as func but slower because of a lot of printf and if */ |
/* Same as func but slower because of a lot of printf and if */ |
int i, ii, j, k, mi, d, kk, kf=0; |
int i, ii, j, k, mi, d, kk, kv=0, kf=0; |
int ioffset=0; |
int ioffset=0; |
int ipos=0,iposold=0,ncovv=0; |
int ipos=0,iposold=0,ncovv=0; |
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Line 4346 double funcone( double *x)
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Line 4434 double funcone( double *x)
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/* Fixed */ |
/* Fixed */ |
/* for (k=1; k<=cptcovn;k++) cov[2+nagesqr+k]=covar[Tvar[k]][i]; */ |
/* for (k=1; k<=cptcovn;k++) cov[2+nagesqr+k]=covar[Tvar[k]][i]; */ |
/* for (k=1; k<=ncoveff;k++){ /\* Simple and product fixed Dummy covariates without age* products *\/ */ |
/* for (k=1; k<=ncoveff;k++){ /\* Simple and product fixed Dummy covariates without age* products *\/ */ |
for (kf=1; kf<=ncovf;kf++){ /* Simple and product fixed covariates without age* products *//* Missing values are set to -1 but should be dropped */ |
for (kf=1; kf<=ncovf;kf++){ /* V2 + V3 + V4 Simple and product fixed covariates without age* products *//* Missing values are set to -1 but should be dropped */ |
/* printf("Debug3 TvarFind[%d]=%d",kf, TvarFind[kf]); */ |
/* printf("Debug3 TvarFind[%d]=%d",kf, TvarFind[kf]); */ |
/* printf(" Tvar[TvarFind[kf]]=%d", Tvar[TvarFind[kf]]); */ |
/* printf(" Tvar[TvarFind[kf]]=%d", Tvar[TvarFind[kf]]); */ |
/* printf(" i=%d covar[Tvar[TvarFind[kf]]][i]=%f\n",i,covar[Tvar[TvarFind[kf]]][i]); */ |
/* printf(" i=%d covar[Tvar[TvarFind[kf]]][i]=%f\n",i,covar[Tvar[TvarFind[kf]]][i]); */ |
Line 4403 double funcone( double *x)
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Line 4491 double funcone( double *x)
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* TvarFind[k] 1 0 0 0 0 0 0 0 0 |
* TvarFind[k] 1 0 0 0 0 0 0 0 0 |
*/ |
*/ |
/* Other model ncovcol=5 nqv=0 ntv=3 nqtv=0 nlstate=3 |
/* Other model ncovcol=5 nqv=0 ntv=3 nqtv=0 nlstate=3 |
* V2 V3 V4 are fixed V6 V7 are timevarying so V8 and V5 are not in the model and product column will start at 9 Tvar[4]=6 |
* V2 V3 V4 are fixed V6 V7 are timevarying so V8 and V5 are not in the model and product column will start at 9 Tvar[(v6*V2)6]=9 |
* FixedV[ncovcol+qv+ntv+nqtv] V5 |
* FixedV[ncovcol+qv+ntv+nqtv] V5 |
* V1 V2 V3 V4 V5 V6 V7 V8 |
* 3 V1 V2 V3 V4 V5 V6 V7 V8 V3*V2 V7*V2 V6*V3 V7*V3 V6*V4 V7*V4 |
* 0 0 0 0 0 1 1 1 |
* 0 0 0 0 0 1 1 1 0, 0, 1,1, 1, 0, 1, 0, 1, 0, 1, 0} |
* model= V2 + V3 + V4 + V6 + V7 + V6*V2 + V7*V2 + V6*V3 + V7*V3 + V6*V4 + V7*V4 |
* 3 0 0 0 0 0 1 1 1 0, 1 1 1 1 1} |
* kmodel 1 2 3 4 5 6 7 8 9 10 11 |
* model= V2 + V3 + V4 + V6 + V7 + V6*V2 + V7*V2 + V6*V3 + V7*V3 + V6*V4 + V7*V4 |
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* +age*V2 +age*V3 +age*V4 +age*V6 + age*V7 |
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* +age*V6*V2 + age*V6*V3 +age*V7*V3 + age*V6*V4 +age*V7*V4 |
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* model2= V2 + V3 + V4 + V6 + V7 + V3*V2 + V7*V2 + V6*V3 + V7*V3 + V6*V4 + V7*V4 |
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* +age*V2 +age*V3 +age*V4 +age*V6 + age*V7 |
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* +age*V3*V2 + age*V6*V3 +age*V7*V3 + age*V6*V4 +age*V7*V4 |
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* model3= V2 + V3 + V4 + V6 + V7 + age*V3*V2 + V7*V2 + V6*V3 + V7*V3 + V6*V4 + V7*V4 |
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* +age*V2 +age*V3 +age*V4 +age*V6 + age*V7 |
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* +V3*V2 + age*V6*V3 +age*V7*V3 + age*V6*V4 +age*V7*V4 |
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* kmodel 1 2 3 4 5 6 7 8 9 10 11 |
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* 12 13 14 15 16 |
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* 17 18 19 20 21 |
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* Tvar[kmodel] 2 3 4 6 7 9 10 11 12 13 14 |
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* 2 3 4 6 7 |
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* 9 11 12 13 14 |
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* cptcovage=5+5 total of covariates with age |
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* Tage[cptcovage] age*V2=12 13 14 15 16 |
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*1 17 18 19 20 21 gives the position in model of covariates associated with age |
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*3 Tage[cptcovage] age*V3*V2=6 |
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*3 age*V2=12 13 14 15 16 |
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*3 age*V6*V3=18 19 20 21 |
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* Tvar[Tage[cptcovage]] Tvar[12]=2 3 4 6 Tvar[16]=7(age*V7) |
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* Tvar[17]age*V6*V2=9 Tvar[18]age*V6*V3=11 age*V7*V3=12 age*V6*V4=13 Tvar[21]age*V7*V4=14 |
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* 2 Tvar[17]age*V3*V2=9 Tvar[18]age*V6*V3=11 age*V7*V3=12 age*V6*V4=13 Tvar[21]age*V7*V4=14 |
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* 3 Tvar[Tage[cptcovage]] Tvar[6]=9 Tvar[12]=2 3 4 6 Tvar[16]=7(age*V7) |
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* 3 Tvar[18]age*V6*V3=11 age*V7*V3=12 age*V6*V4=13 Tvar[21]age*V7*V4=14 |
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* 3 Tage[cptcovage] age*V3*V2=6 age*V2=12 age*V3 13 14 15 16 |
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* age*V6*V3=18 19 20 21 gives the position in model of covariates associated with age |
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* 3 Tvar[17]age*V3*V2=9 Tvar[18]age*V6*V3=11 age*V7*V3=12 age*V6*V4=13 Tvar[21]age*V7*V4=14 |
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* Tvar= {2, 3, 4, 6, 7, |
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* 9, 10, 11, 12, 13, 14, |
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* Tvar[12]=2, 3, 4, 6, 7, |
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* Tvar[17]=9, 11, 12, 13, 14} |
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* Typevar[1]@21 = {0, 0, 0, 0, 0, |
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* 2, 2, 2, 2, 2, 2, |
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* 3 3, 2, 2, 2, 2, 2, |
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* 1, 1, 1, 1, 1, |
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* 3, 3, 3, 3, 3} |
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* 3 2, 3, 3, 3, 3} |
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* p Tposprod[1]@21 {0, 0, 0, 0, 0, 1, 2, 3, 4, 5, 6, 0, 0, 0, 0, 0, 1, 3, 4, 5, 6} Id of the prod at position k in the model |
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* p Tprod[1]@21 {6, 7, 8, 9, 10, 11, 0 <repeats 15 times>} |
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* 3 Tposprod[1]@21 {0, 0, 0, 0, 0, 1, 2, 3, 4, 5, 6, 0, 0, 0, 0, 0, 1, 3, 4, 5, 6} |
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* 3 Tprod[1]@21 {17, 7, 8, 9, 10, 11, 0 <repeats 15 times>} |
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* cptcovprod=11 (6+5) |
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* FixedV[Tvar[Tage[cptcovage]]]] FixedV[2]=0 FixedV[3]=0 0 1 (age*V7)Tvar[16]=1 FixedV[absolute] not [kmodel] |
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* FixedV[Tvar[17]=FixedV[age*V6*V2]=FixedV[9]=1 1 1 1 1 |
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* 3 FixedV[Tvar[17]=FixedV[age*V3*V2]=FixedV[9]=0 [11]=1 1 1 1 |
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* FixedV[] V1=0 V2=0 V3=0 v4=0 V5=0 V6=1 V7=1 v8=1 OK then model dependent |
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* 9=1 [V7*V2]=[10]=1 11=1 12=1 13=1 14=1 |
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* 3 9=0 [V7*V2]=[10]=1 11=1 12=1 13=1 14=1 |
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* cptcovdageprod=5 for gnuplot printing |
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* cptcovprodvage=6 |
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* ncova=15 1 2 3 4 5 |
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* 6 7 8 9 10 11 12 13 14 15 |
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* TvarA 2 3 4 6 7 |
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* 6 2 6 7 7 3 6 4 7 4 |
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* TvaAind 12 12 13 13 14 14 15 15 16 16 |
* ncovf 1 2 3 |
* ncovf 1 2 3 |
* ncovvt=14 1 2 3 4 5 6 7 8 9 10 11 12 13 14 |
* V6 V7 V6*V2 V7*V2 V6*V3 V7*V3 V6*V4 V7*V4 |
* TvarVV[1]@14 = itv {6, 7, 6, 2, 7, 2, 6, 3, 7, 3, 6, 4, 7, 4} |
* ncovvt=14 1 2 3 4 5 6 7 8 9 10 11 12 13 14 |
* TvarVVind[1]@14= {4, 5, 6, 6, 7, 7, 8, 8, 9, 9, 10, 10, 11, 11} |
* TvarVV[1]@14 = itv {V6=6, 7, V6*V2=6, 2, 7, 2, 6, 3, 7, 3, 6, 4, 7, 4} |
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* TvarVVind[1]@14= {4, 5, 6, 6, 7, 7, 8, 8, 9, 9, 10, 10, 11, 11} |
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* 3 ncovvt=12 V6 V7 V7*V2 V6*V3 V7*V3 V6*V4 V7*V4 |
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* 3 TvarVV[1]@12 = itv {6, 7, V7*V2=7, 2, 6, 3, 7, 3, 6, 4, 7, 4} |
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* 3 1 2 3 4 5 6 7 8 9 10 11 12 |
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* TvarVVind[1]@12= {V6 is in k=4, 5, 7,(4isV2)=7, 8, 8, 9, 9, 10,10, 11,11}TvarVVind[12]=k=11 |
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* TvarV 6, 7, 9, 10, 11, 12, 13, 14 |
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* 3 cptcovprodvage=6 |
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* 3 ncovta=15 +age*V3*V2+age*V2+agev3+ageV4 +age*V6 + age*V7 + age*V6*V3 +age*V7*V3 + age*V6*V4 +age*V7*V4 |
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* 3 TvarAVVA[1]@15= itva 3 2 2 3 4 6 7 6 3 7 3 6 4 7 4 |
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* 3 ncovta 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 |
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*?TvarAVVAind[1]@15= V3 is in k=2 1 1 2 3 4 5 4,2 5,2, 4,3 5 3}TvarVVAind[] |
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* TvarAVVAind[1]@15= V3 is in k=6 6 12 13 14 15 16 18 18 19,19, 20,20 21,21}TvarVVAind[] |
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* 3 ncovvta=10 +age*V6 + age*V7 + age*V6*V3 +age*V7*V3 + age*V6*V4 +age*V7*V4 |
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* 3 we want to compute =cotvar[mw[mi][i]][TvarVVA[ncovva]][i] at position TvarVVAind[ncovva] |
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* 3 TvarVVA[1]@10= itva 6 7 6 3 7 3 6 4 7 4 |
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* 3 ncovva 1 2 3 4 5 6 7 8 9 10 |
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* TvarVVAind[1]@10= V6 is in k=4 5 8,8 9, 9, 10,10 11 11}TvarVVAind[] |
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* TvarVVAind[1]@10= 15 16 18,18 19,19, 20,20 21 21}TvarVVAind[] |
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* TvarVA V3*V2=6 6 , 1, 2, 11, 12, 13, 14 |
* TvarFind[1]@14= {1, 2, 3, 0 <repeats 12 times>} |
* TvarFind[1]@14= {1, 2, 3, 0 <repeats 12 times>} |
* Tvar[1]@20= {2, 3, 4, 6, 7, 9, 10, 11, 12, 13, 14} |
* Tvar[1]@21= {2, 3, 4, 6, 7, 9, 10, 11, 12, 13, 14, |
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* 2, 3, 4, 6, 7, |
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* 6, 8, 9, 10, 11} |
* TvarFind[itv] 0 0 0 |
* TvarFind[itv] 0 0 0 |
* FixedV[itv] 1 1 1 0 1 0 1 0 1 0 0 |
* FixedV[itv] 1 1 1 0 1 0 1 0 1 0 0 |
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*? FixedV[itv] 1 1 1 0 1 0 1 0 1 0 1 0 1 0 |
* Tvar[TvarFind[ncovf]]=[1]=2 [2]=3 [4]=4 |
* Tvar[TvarFind[ncovf]]=[1]=2 [2]=3 [4]=4 |
* Tvar[TvarFind[itv]] [0]=? ?ncovv 1 Ã ncovvt] |
* Tvar[TvarFind[itv]] [0]=? ?ncovv 1 Ã ncovvt] |
* Not a fixed cotvar[mw][itv][i] 6 7 6 2 7, 2, 6, 3, 7, 3, 6, 4, 7, 4} |
* Not a fixed cotvar[mw][itv][i] 6 7 6 2 7, 2, 6, 3, 7, 3, 6, 4, 7, 4} |
* fixed covar[itv] [6] [7] [6][2] |
* fixed covar[itv] [6] [7] [6][2] |
*/ |
*/ |
|
|
for(ncovv=1, iposold=0; ncovv <= ncovvt ; ncovv++){ /* Varying covariates (single and product but no age) including individual from products */ |
for(ncovv=1, iposold=0; ncovv <= ncovvt ; ncovv++){ /* V6 V7 V7*V2 V6*V3 V7*V3 V6*V4 V7*V4 Time varying covariates (single and extended product but no age) including individual from products, product is computed dynamically */ |
itv=TvarVV[ncovv]; /* TvarVV={3, 1, 3} gives the name of each varying covariate, exploding product */ |
itv=TvarVV[ncovv]; /* TvarVV={3, 1, 3} gives the name of each varying covariate, or fixed covariate of a varying product after exploding product Vn*Vm into Vn and then Vm */ |
ipos=TvarVVind[ncovv]; /* TvarVVind={2, 5, 5] gives the position in the model of the ncovv th varying covariate*/ |
ipos=TvarVVind[ncovv]; /* TvarVVind={2, 5, 5] gives the position in the model of the ncovv th varying covariate*/ |
/* if(TvarFind[itv]==0){ /\* Not a fixed covariate? Could be a fixed covariate of a product with a higher than ncovcol+nqv, itv *\/ */ |
/* if(TvarFind[itv]==0){ /\* Not a fixed covariate? Could be a fixed covariate of a product with a higher than ncovcol+nqv, itv *\/ */ |
if(FixedV[itv]!=0){ /* Not a fixed covariate? Could be a fixed covariate of a product with a higher than ncovcol+nqv, itv */ |
if(FixedV[itv]!=0){ /* Not a fixed covariate? Could be a fixed covariate of a product with a higher than ncovcol+nqv, itv */ |
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/* printf("DEBUG ncovv=%d, Varying TvarVV[ncovv]=%d\n",ncovv, TvarVV[ncovv]); */ |
cotvarv=cotvar[mw[mi][i]][TvarVV[ncovv]][i]; /* because cotvar starts now at first ncovcol+nqv+ntv+nqtv (1 to nqtv) */ |
cotvarv=cotvar[mw[mi][i]][TvarVV[ncovv]][i]; /* because cotvar starts now at first ncovcol+nqv+ntv+nqtv (1 to nqtv) */ |
|
/* printf("DEBUG Varying cov[ioffset+ipos=%d]=%g \n",ioffset+ipos,cotvarv); */ |
}else{ /* fixed covariate */ |
}else{ /* fixed covariate */ |
/* cotvarv=covar[Tvar[TvarFind[itv]]][i]; /\* Error: TvarFind gives the name, that is the true column of fixed covariates, but Tvar of the model *\/ */ |
/* cotvarv=covar[Tvar[TvarFind[itv]]][i]; /\* Error: TvarFind gives the name, that is the true column of fixed covariates, but Tvar of the model *\/ */ |
cotvarv=covar[itv][i]; /* Error: TvarFind gives the name, that is the true column of fixed covariates, but Tvar of the model */ |
/* printf("DEBUG ncovv=%d, Fixed TvarVV[ncovv]=%d\n",ncovv, TvarVV[ncovv]); */ |
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cotvarv=covar[itv][i]; /* Good: In V6*V3, 3 is fixed at position of the data */ |
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/* printf("DEBUG Fixed cov[ioffset+ipos=%d]=%g \n",ioffset+ipos,cotvarv); */ |
} |
} |
if(ipos!=iposold){ /* Not a product or first of a product */ |
if(ipos!=iposold){ /* Not a product or first of a product */ |
cotvarvold=cotvarv; |
cotvarvold=cotvarv; |
Line 4440 double funcone( double *x)
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Line 4610 double funcone( double *x)
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} |
} |
iposold=ipos; |
iposold=ipos; |
cov[ioffset+ipos]=cotvarv; |
cov[ioffset+ipos]=cotvarv; |
|
/* printf("DEBUG Product cov[ioffset+ipos=%d] \n",ioffset+ipos); */ |
/* For products */ |
/* For products */ |
} |
} |
/* for(itv=1; itv <= ntveff; itv++){ /\* Varying dummy covariates single *\/ */ |
/* for(itv=1; itv <= ntveff; itv++){ /\* Varying dummy covariates single *\/ */ |
Line 4478 double funcone( double *x)
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Line 4649 double funcone( double *x)
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cov[2]=agexact; |
cov[2]=agexact; |
if(nagesqr==1) |
if(nagesqr==1) |
cov[3]= agexact*agexact; |
cov[3]= agexact*agexact; |
for (kk=1; kk<=cptcovage;kk++) { |
for(ncovva=1, iposold=0; ncovva <= ncovta ; ncovva++){ /* Time varying covariates with age including individual from products, product is computed dynamically */ |
if(!FixedV[Tvar[Tage[kk]]]) |
itv=TvarAVVA[ncovva]; /* TvarVV={3, 1, 3} gives the name of each varying covariate, exploding product Vn*Vm into Vn and then Vm */ |
cov[Tage[kk]+2+nagesqr]=covar[Tvar[Tage[kk]]][i]*agexact; |
ipos=TvarAVVAind[ncovva]; /* TvarVVind={2, 5, 5] gives the position in the model of the ncovv th varying covariate*/ |
else |
/* if(TvarFind[itv]==0){ /\* Not a fixed covariate? Could be a fixed covariate of a product with a higher than ncovcol+nqv, itv *\/ */ |
cov[Tage[kk]+2+nagesqr]=cotvar[mw[mi][i]][Tvar[Tage[kk]]][i]*agexact; /* because cotvar starts now at first ncovcol+nqv+ (1 to nqtv) */ |
if(FixedV[itv]!=0){ /* Not a fixed covariate? Could be a fixed covariate of a product with a higher than ncovcol+nqv, itv */ |
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/* printf("DEBUG ncovva=%d, Varying TvarAVVA[ncovva]=%d\n", ncovva, TvarAVVA[ncovva]); */ |
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cotvarv=cotvar[mw[mi][i]][TvarAVVA[ncovva]][i]; /* because cotvar starts now at first ncovcol+nqv+ntv+nqtv (1 to nqtv) */ |
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}else{ /* fixed covariate */ |
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/* cotvarv=covar[Tvar[TvarFind[itv]]][i]; /\* Error: TvarFind gives the name, that is the true column of fixed covariates, but Tvar of the model *\/ */ |
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/* printf("DEBUG ncovva=%d, Fixed TvarAVVA[ncovva]=%d\n", ncovva, TvarAVVA[ncovva]); */ |
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cotvarv=covar[itv][i]; /* Error: TvarFind gives the name, that is the true column of fixed covariates, but Tvar of the model */ |
|
} |
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if(ipos!=iposold){ /* Not a product or first of a product */ |
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cotvarvold=cotvarv; |
|
}else{ /* A second product */ |
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/* printf("DEBUG * \n"); */ |
|
cotvarv=cotvarv*cotvarvold; |
|
} |
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iposold=ipos; |
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/* printf("DEBUG Product cov[ioffset+ipos=%d] \n",ioffset+ipos); */ |
|
cov[ioffset+ipos]=cotvarv*agexact; |
|
/* For products */ |
} |
} |
|
|
/* printf("i=%d,mi=%d,d=%d,mw[mi][i]=%d\n",i, mi,d,mw[mi][i]); */ |
/* printf("i=%d,mi=%d,d=%d,mw[mi][i]=%d\n",i, mi,d,mw[mi][i]); */ |
/* savm=pmij(pmmij,cov,ncovmodel,x,nlstate); */ |
/* savm=pmij(pmmij,cov,ncovmodel,x,nlstate); */ |
out=matprod2(newm,oldm,1,nlstate+ndeath,1,nlstate+ndeath, |
out=matprod2(newm,oldm,1,nlstate+ndeath,1,nlstate+ndeath, |
Line 4571 double funcone( double *x)
|
Line 4760 double funcone( double *x)
|
} |
} |
iposold=ipos; |
iposold=ipos; |
} |
} |
for (kk=1; kk<=cptcovage;kk++) { |
/* for (kk=1; kk<=cptcovage;kk++) { */ |
if(!FixedV[Tvar[Tage[kk]]]){ |
/* if(!FixedV[Tvar[Tage[kk]]]){ */ |
fprintf(ficresilk," %g*age",covar[Tvar[Tage[kk]]][i]); |
/* fprintf(ficresilk," %g*age",covar[Tvar[Tage[kk]]][i]); */ |
/* printf(" %g*age",covar[Tvar[Tage[kk]]][i]); */ |
/* /\* printf(" %g*age",covar[Tvar[Tage[kk]]][i]); *\/ */ |
}else{ |
/* }else{ */ |
fprintf(ficresilk," %g*age",cotvar[mw[mi][i]][Tvar[Tage[kk]]][i]);/* because cotvar starts now at first ncovcol+nqv+ (1 to nqtv) */ |
/* fprintf(ficresilk," %g*age",cotvar[mw[mi][i]][Tvar[Tage[kk]]][i]);/\* because cotvar starts now at first ncovcol+nqv+ (1 to nqtv) *\/ */ |
/* printf(" %g*age",cotvar[mw[mi][i]][Tvar[Tage[kk]]][i]);/\* because cotvar starts now at first ncovcol+nqv+ (1 to nqtv) *\/ */ |
/* /\* printf(" %g*age",cotvar[mw[mi][i]][Tvar[Tage[kk]]][i]);/\\* because cotvar starts now at first ncovcol+nqv+ (1 to nqtv) *\\/ *\/ */ |
|
/* } */ |
|
/* } */ |
|
for(ncovva=1, iposold=0; ncovva <= ncovta ; ncovva++){ /* Time varying covariates with age including individual from products, product is computed dynamically */ |
|
itv=TvarAVVA[ncovva]; /* TvarVV={3, 1, 3} gives the name of each varying covariate, exploding product Vn*Vm into Vn and then Vm */ |
|
ipos=TvarAVVAind[ncovva]; /* TvarVVind={2, 5, 5] gives the position in the model of the ncovv th varying covariate*/ |
|
/* if(TvarFind[itv]==0){ /\* Not a fixed covariate? Could be a fixed covariate of a product with a higher than ncovcol+nqv, itv *\/ */ |
|
if(FixedV[itv]!=0){ /* Not a fixed covariate? Could be a fixed covariate of a product with a higher than ncovcol+nqv, itv */ |
|
/* printf("DEBUG ncovva=%d, Varying TvarAVVA[ncovva]=%d\n", ncovva, TvarAVVA[ncovva]); */ |
|
cotvarv=cotvar[mw[mi][i]][TvarAVVA[ncovva]][i]; /* because cotvar starts now at first ncovcol+nqv+ntv+nqtv (1 to nqtv) */ |
|
}else{ /* fixed covariate */ |
|
/* cotvarv=covar[Tvar[TvarFind[itv]]][i]; /\* Error: TvarFind gives the name, that is the true column of fixed covariates, but Tvar of the model *\/ */ |
|
/* printf("DEBUG ncovva=%d, Fixed TvarAVVA[ncovva]=%d\n", ncovva, TvarAVVA[ncovva]); */ |
|
cotvarv=covar[itv][i]; /* Error: TvarFind gives the name, that is the true column of fixed covariates, but Tvar of the model */ |
} |
} |
|
if(ipos!=iposold){ /* Not a product or first of a product */ |
|
cotvarvold=cotvarv; |
|
}else{ /* A second product */ |
|
/* printf("DEBUG * \n"); */ |
|
cotvarv=cotvarv*cotvarvold; |
|
} |
|
cotvarv=cotvarv*agexact; |
|
fprintf(ficresilk," %g*age",cotvarv); |
|
iposold=ipos; |
|
/* printf("DEBUG Product cov[ioffset+ipos=%d] \n",ioffset+ipos); */ |
|
cov[ioffset+ipos]=cotvarv; |
|
/* For products */ |
} |
} |
/* printf("\n"); */ |
/* printf("\n"); */ |
/* } /\* End debugILK *\/ */ |
/* } /\* End debugILK *\/ */ |
Line 4672 void likelione(FILE *ficres,double p[],
|
Line 4886 void likelione(FILE *ficres,double p[],
|
fprintf(fichtm,"<br>- Probability p<sub>%dj</sub> by origin %d and destination j. Dot's sizes are related to corresponding weight: <a href=\"%s-p%dj.png\">%s-p%dj.png</a><br>\n \ |
fprintf(fichtm,"<br>- Probability p<sub>%dj</sub> by origin %d and destination j. Dot's sizes are related to corresponding weight: <a href=\"%s-p%dj.png\">%s-p%dj.png</a><br>\n \ |
<img src=\"%s-p%dj.png\">\n",k,k,subdirf2(optionfilefiname,"ILK_"),k,subdirf2(optionfilefiname,"ILK_"),k,subdirf2(optionfilefiname,"ILK_"),k); |
<img src=\"%s-p%dj.png\">\n",k,k,subdirf2(optionfilefiname,"ILK_"),k,subdirf2(optionfilefiname,"ILK_"),k,subdirf2(optionfilefiname,"ILK_"),k); |
for(kf=1; kf <= ncovf; kf++){ /* For each simple dummy covariate of the model */ |
for(kf=1; kf <= ncovf; kf++){ /* For each simple dummy covariate of the model */ |
/* kvar=Tvar[TvarFind[kf]]; */ /* variable */ |
kvar=Tvar[TvarFind[kf]]; /* variable */ |
fprintf(fichtm,"<br>- Probability p<sub>%dj</sub> by origin %d and destination j with colored covariate V%d. Same dot size of all points but with a different color for transitions with dummy variable V%d=1 at beginning of transition (keeping former color for V%d=0): <a href=\"%s-p%dj.png\">%s-p%dj.png</a><br> \ |
fprintf(fichtm,"<br>- Probability p<sub>%dj</sub> by origin %d and destination j with colored covariate V%d. Same dot size of all points but with a different color for transitions with dummy variable V%d=1 at beginning of transition (keeping former color for V%d=0): ",k,k,Tvar[TvarFind[kf]],Tvar[TvarFind[kf]],Tvar[TvarFind[kf]]); |
<img src=\"%s-p%dj-%d.png\">",k,k,Tvar[TvarFind[kf]],Tvar[TvarFind[kf]],Tvar[TvarFind[kf]],subdirf2(optionfilefiname,"ILK_"),k,subdirf2(optionfilefiname,"ILK_"),k,subdirf2(optionfilefiname,"ILK_"),k,Tvar[TvarFind[kf]]); |
fprintf(fichtm,"<a href=\"%s-p%dj-%d.png\">%s-p%dj-%d.png</a><br>",subdirf2(optionfilefiname,"ILK_"),k,kvar,subdirf2(optionfilefiname,"ILK_"),k,kvar); |
|
fprintf(fichtm,"<img src=\"%s-p%dj-%d.png\">",subdirf2(optionfilefiname,"ILK_"),k,Tvar[TvarFind[kf]]); |
} |
} |
for(ncovv=1, iposold=0; ncovv <= ncovvt ; ncovv++){ /* Loop on the time varying extended covariates (with extension of Vn*Vm */ |
for(ncovv=1, iposold=0; ncovv <= ncovvt ; ncovv++){ /* Loop on the time varying extended covariates (with extension of Vn*Vm */ |
ipos=TvarVVind[ncovv]; /* TvarVVind={2, 5, 5] gives the position in the model of the ncovv th varying covariate */ |
ipos=TvarVVind[ncovv]; /* TvarVVind={2, 5, 5] gives the position in the model of the ncovv th varying covariate */ |
Line 4738 void mlikeli(FILE *ficres,double p[], in
|
Line 4953 void mlikeli(FILE *ficres,double p[], in
|
double fret; |
double fret; |
double fretone; /* Only one call to likelihood */ |
double fretone; /* Only one call to likelihood */ |
/* char filerespow[FILENAMELENGTH];*/ |
/* char filerespow[FILENAMELENGTH];*/ |
|
|
|
double * p1; /* Shifted parameters from 0 instead of 1 */ |
#ifdef NLOPT |
#ifdef NLOPT |
int creturn; |
int creturn; |
nlopt_opt opt; |
nlopt_opt opt; |
/* double lb[9] = { -HUGE_VAL, -HUGE_VAL, -HUGE_VAL, -HUGE_VAL, -HUGE_VAL, -HUGE_VAL, -HUGE_VAL, -HUGE_VAL, -HUGE_VAL }; /\* lower bounds *\/ */ |
/* double lb[9] = { -HUGE_VAL, -HUGE_VAL, -HUGE_VAL, -HUGE_VAL, -HUGE_VAL, -HUGE_VAL, -HUGE_VAL, -HUGE_VAL, -HUGE_VAL }; /\* lower bounds *\/ */ |
double *lb; |
double *lb; |
double minf; /* the minimum objective value, upon return */ |
double minf; /* the minimum objective value, upon return */ |
double * p1; /* Shifted parameters from 0 instead of 1 */ |
|
myfunc_data dinst, *d = &dinst; |
myfunc_data dinst, *d = &dinst; |
#endif |
#endif |
|
|
Line 5080 double hessij( double x[], double **hess
|
Line 5296 double hessij( double x[], double **hess
|
kmax=kmax+10; |
kmax=kmax+10; |
} |
} |
if(kmax >=10 || firstime ==1){ |
if(kmax >=10 || firstime ==1){ |
|
/* What are the thetai and thetaj? thetai/ncovmodel thetai=(thetai-thetai%ncovmodel)/ncovmodel +thetai%ncovmodel=(line,pos) */ |
printf("Warning: directions %d-%d, you are not estimating the Hessian at the exact maximum likelihood; you could increase ftol=%.2e\n",thetai,thetaj, ftol); |
printf("Warning: directions %d-%d, you are not estimating the Hessian at the exact maximum likelihood; you could increase ftol=%.2e\n",thetai,thetaj, ftol); |
fprintf(ficlog,"Warning: directions %d-%d, you are not estimating the Hessian at the exact maximum likelihood; you could increase ftol=%.2e\n",thetai,thetaj, ftol); |
fprintf(ficlog,"Warning: directions %d-%d, you are not estimating the Hessian at the exact maximum likelihood; you could increase ftol=%.2e\n",thetai,thetaj, ftol); |
printf("%d %d k=%d, k1=%.12e k2=%.12e k3=%.12e k4=%.12e delti*k=%.12e deltj*k=%.12e, xi-de*k=%.12e xj-de*k=%.12e res=%.12e k1234=%.12e,k1-2=%.12e,k3-4=%.12e\n",thetai,thetaj,k,k1,k2,k3,k4,delti[thetai]/k,delti[thetaj]/k,x[thetai]-delti[thetai]/k,x[thetaj]-delti[thetaj]/k, res,k1-k2-k3+k4,k1-k2,k3-k4); |
printf("%d %d k=%d, k1=%.12e k2=%.12e k3=%.12e k4=%.12e delti*k=%.12e deltj*k=%.12e, xi-de*k=%.12e xj-de*k=%.12e res=%.12e k1234=%.12e,k1-2=%.12e,k3-4=%.12e\n",thetai,thetaj,k,k1,k2,k3,k4,delti[thetai]/k,delti[thetaj]/k,x[thetai]-delti[thetai]/k,x[thetaj]-delti[thetaj]/k, res,k1-k2-k3+k4,k1-k2,k3-k4); |
Line 6294 void concatwav(int wav[], int **dh, int
|
Line 6511 void concatwav(int wav[], int **dh, int
|
for (k=1; k<=cptcovt; k++) { /* cptcovt: total number of covariates of the model (2) nbocc(+)+1 = 8 excepting constant and age and age*age */ |
for (k=1; k<=cptcovt; k++) { /* cptcovt: total number of covariates of the model (2) nbocc(+)+1 = 8 excepting constant and age and age*age */ |
for (j=-1; (j < maxncov); j++) Ndum[j]=0; |
for (j=-1; (j < maxncov); j++) Ndum[j]=0; |
/* printf("Testing k=%d, cptcovt=%d\n",k, cptcovt); */ |
/* printf("Testing k=%d, cptcovt=%d\n",k, cptcovt); */ |
if(Dummy[k]==0 && Typevar[k] !=1 && Typevar[k] != 2){ /* Dummy covariate and not age product nor fixed product */ |
if(Dummy[k]==0 && Typevar[k] !=1 && Typevar[k] != 3 && Typevar[k] != 2){ /* Dummy covariate and not age product nor fixed product */ |
switch(Fixed[k]) { |
switch(Fixed[k]) { |
case 0: /* Testing on fixed dummy covariate, simple or product of fixed */ |
case 0: /* Testing on fixed dummy covariate, simple or product of fixed */ |
modmaxcovj=0; |
modmaxcovj=0; |
Line 6391 void concatwav(int wav[], int **dh, int
|
Line 6608 void concatwav(int wav[], int **dh, int
|
break; |
break; |
} /* end switch */ |
} /* end switch */ |
} /* end dummy test */ |
} /* end dummy test */ |
if(Dummy[k]==1 && Typevar[k] !=1 && Fixed ==0){ /* Fixed Quantitative covariate and not age product */ |
if(Dummy[k]==1 && Typevar[k] !=1 && Typevar[k] !=3 && Fixed ==0){ /* Fixed Quantitative covariate and not age product */ |
for (i=1; i<=imx; i++) { /* Loop on individuals: reads the data file to get the maximum value of the modality of this covariate Vj*/ |
for (i=1; i<=imx; i++) { /* Loop on individuals: reads the data file to get the maximum value of the modality of this covariate Vj*/ |
if(Tvar[k]<=0 || Tvar[k]>=NCOVMAX){ |
if(Tvar[k]<=0 || Tvar[k]>=NCOVMAX){ |
printf("Error k=%d \n",k); |
printf("Error k=%d \n",k); |
Line 7417 void varprob(char optionfilefiname[], do
|
Line 7634 void varprob(char optionfilefiname[], do
|
double ***varpij; |
double ***varpij; |
|
|
strcpy(fileresprob,"PROB_"); |
strcpy(fileresprob,"PROB_"); |
strcat(fileresprob,fileres); |
strcat(fileresprob,fileresu); |
if((ficresprob=fopen(fileresprob,"w"))==NULL) { |
if((ficresprob=fopen(fileresprob,"w"))==NULL) { |
printf("Problem with resultfile: %s\n", fileresprob); |
printf("Problem with resultfile: %s\n", fileresprob); |
fprintf(ficlog,"Problem with resultfile: %s\n", fileresprob); |
fprintf(ficlog,"Problem with resultfile: %s\n", fileresprob); |
Line 7574 To be simple, these graphs help to under
|
Line 7791 To be simple, these graphs help to under
|
cov[3]= age*age; |
cov[3]= age*age; |
/* New code end of combination but for each resultline */ |
/* New code end of combination but for each resultline */ |
for(k1=1;k1<=cptcovt;k1++){ /* loop on model equation (including products) */ |
for(k1=1;k1<=cptcovt;k1++){ /* loop on model equation (including products) */ |
if(Typevar[k1]==1){ /* A product with age */ |
if(Typevar[k1]==1 || Typevar[k1] ==3){ /* A product with age */ |
cov[2+nagesqr+k1]=precov[nres][k1]*cov[2]; |
cov[2+nagesqr+k1]=precov[nres][k1]*cov[2]; |
}else{ |
}else{ |
cov[2+nagesqr+k1]=precov[nres][k1]; |
cov[2+nagesqr+k1]=precov[nres][k1]; |
Line 8165 true period expectancies (those weighted
|
Line 8382 true period expectancies (those weighted
|
/******************* Gnuplot file **************/ |
/******************* Gnuplot file **************/ |
void printinggnuplot(char fileresu[], char optionfilefiname[], double ageminpar, double agemaxpar, double bage, double fage , int prevfcast, int prevbcast, char pathc[], double p[], int offyear, int offbyear){ |
void printinggnuplot(char fileresu[], char optionfilefiname[], double ageminpar, double agemaxpar, double bage, double fage , int prevfcast, int prevbcast, char pathc[], double p[], int offyear, int offbyear){ |
|
|
char dirfileres[132],optfileres[132]; |
char dirfileres[256],optfileres[256]; |
char gplotcondition[132], gplotlabel[132]; |
char gplotcondition[256], gplotlabel[256]; |
int cpt=0,k1=0,i=0,k=0,j=0,jk=0,k2=0,k3=0,k4=0,kf=0,kvar=0,kk=0,ipos=0,iposold=0,ij=0, ijp=0, l=0; |
int cpt=0,k1=0,i=0,k=0,j=0,jk=0,k2=0,k3=0,k4=0,kf=0,kvar=0,kk=0,ipos=0,iposold=0,ij=0, ijp=0, l=0; |
int lv=0, vlv=0, kl=0; |
int lv=0, vlv=0, kl=0; |
int ng=0; |
int ng=0; |
Line 8236 void printinggnuplot(char fileresu[], ch
|
Line 8453 void printinggnuplot(char fileresu[], ch
|
for(kf=1; kf <= ncovf; kf++){ /* For each simple dummy covariate of the model */ |
for(kf=1; kf <= ncovf; kf++){ /* For each simple dummy covariate of the model */ |
kvar=Tvar[TvarFind[kf]]; /* variable name */ |
kvar=Tvar[TvarFind[kf]]; /* variable name */ |
/* k=18+Tvar[TvarFind[kf]];/\*offset because there are 18 columns in the ILK_ file but could be placed else where *\/ */ |
/* k=18+Tvar[TvarFind[kf]];/\*offset because there are 18 columns in the ILK_ file but could be placed else where *\/ */ |
k=18+kf;/*offset because there are 18 columns in the ILK_ file */ |
/* k=18+kf;/\*offset because there are 18 columns in the ILK_ file *\/ */ |
|
/* k=19+kf;/\*offset because there are 19 columns in the ILK_ file *\/ */ |
|
k=16+nlstate+kf;/*offset because there are 19 columns in the ILK_ file, first cov Vn on col 21 with 4 living states */ |
for (i=1; i<= nlstate ; i ++) { |
for (i=1; i<= nlstate ; i ++) { |
fprintf(ficgp,"\nset out \"%s-p%dj-%d.png\";set ylabel \"Probability for each individual/wave\";",subdirf2(optionfilefiname,"ILK_"),i,kvar); |
fprintf(ficgp,"\nset out \"%s-p%dj-%d.png\";set ylabel \"Probability for each individual/wave\";",subdirf2(optionfilefiname,"ILK_"),i,kvar); |
fprintf(ficgp,"unset log;\n# For each simple dummy covariate of the model \n plot \"%s\"",subdirf(fileresilk)); |
fprintf(ficgp,"unset log;\n# For each simple dummy covariate of the model \n plot \"%s\"",subdirf(fileresilk)); |
Line 8922 set ter svg size 640, 480\nunset log y\n
|
Line 9141 set ter svg size 640, 480\nunset log y\n
|
fprintf(ficgp," u %d:(",ioffset); |
fprintf(ficgp," u %d:(",ioffset); |
kl=0; |
kl=0; |
strcpy(gplotcondition,"("); |
strcpy(gplotcondition,"("); |
for (k=1; k<=cptcoveff; k++){ /* For each covariate writing the chain of conditions */ |
/* for (k=1; k<=cptcoveff; k++){ /\* For each covariate writing the chain of conditions *\/ */ |
/* lv= decodtabm(k1,k,cptcoveff); /\* Should be the covariate value corresponding to combination k1 and covariate k *\/ */ |
/* lv= decodtabm(k1,k,cptcoveff); /\* Should be the covariate value corresponding to combination k1 and covariate k *\/ */ |
lv=codtabm(k1,TnsdVar[Tvaraff[k]]); |
for (k=1; k<=cptcovs; k++){ /* For each covariate k get corresponding value lv for combination k1 */ |
|
/* lv=codtabm(k1,TnsdVar[Tvaraff[k]]); */ |
|
lv=Tvresult[nres][k]; |
|
vlv=TinvDoQresult[nres][Tvresult[nres][k]]; |
/* decodtabm(1,1,4) = 1 because h=1 k= (1) 1 1 1 */ |
/* decodtabm(1,1,4) = 1 because h=1 k= (1) 1 1 1 */ |
/* decodtabm(1,2,4) = 1 because h=1 k= 1 (1) 1 1 */ |
/* decodtabm(1,2,4) = 1 because h=1 k= 1 (1) 1 1 */ |
/* decodtabm(13,3,4)= 2 because h=13 k= 1 1 (2) 2 */ |
/* decodtabm(13,3,4)= 2 because h=13 k= 1 1 (2) 2 */ |
/* vlv= nbcode[Tvaraff[k]][lv]; /\* Value of the modality of Tvaraff[k] *\/ */ |
/* vlv= nbcode[Tvaraff[k]][lv]; /\* Value of the modality of Tvaraff[k] *\/ */ |
vlv= nbcode[Tvaraff[k]][codtabm(k1,TnsdVar[Tvaraff[k]])]; |
/* vlv= nbcode[Tvaraff[k]][codtabm(k1,TnsdVar[Tvaraff[k]])]; */ |
kl++; |
kl++; |
sprintf(gplotcondition+strlen(gplotcondition),"$%d==%d && $%d==%d " ,kl,Tvaraff[k], kl+1, nbcode[Tvaraff[k]][lv]); |
/* sprintf(gplotcondition+strlen(gplotcondition),"$%d==%d && $%d==%d " ,kl,Tvaraff[k], kl+1, nbcode[Tvaraff[k]][lv]); */ |
|
sprintf(gplotcondition+strlen(gplotcondition),"$%d==%d && $%d==%d " ,kl,lv, kl+1, vlv ); |
kl++; |
kl++; |
if(k <cptcoveff && cptcoveff>1) |
if(k <cptcovs && cptcovs>1) |
sprintf(gplotcondition+strlen(gplotcondition)," && "); |
sprintf(gplotcondition+strlen(gplotcondition)," && "); |
} |
} |
strcpy(gplotcondition+strlen(gplotcondition),")"); |
strcpy(gplotcondition+strlen(gplotcondition),")"); |
Line 9017 set ter svg size 640, 480\nunset log y\n
|
Line 9240 set ter svg size 640, 480\nunset log y\n
|
}else{ |
}else{ |
fprintf(ficgp,",\\\n '' "); |
fprintf(ficgp,",\\\n '' "); |
} |
} |
if(cptcoveff ==0){ /* No covariate */ |
/* if(cptcoveff ==0){ /\* No covariate *\/ */ |
|
if(cptcovs ==0){ /* No covariate */ |
ioffset=2; /* Age is in 2 */ |
ioffset=2; /* Age is in 2 */ |
/*# yearproj age p11 p21 p31 p.1 p12 p22 p32 p.2 p13 p23 p33 p.3 p14 p24 p34 p.4*/ |
/*# yearproj age p11 p21 p31 p.1 p12 p22 p32 p.2 p13 p23 p33 p.3 p14 p24 p34 p.4*/ |
/*# 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 */ |
/*# 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 */ |
Line 9129 set ter svg size 640, 480\nunset log y\n
|
Line 9353 set ter svg size 640, 480\nunset log y\n
|
fprintf(ficgp,"#Number of graphics: first is logit, 2nd is probabilities, third is incidences per year\n"); |
fprintf(ficgp,"#Number of graphics: first is logit, 2nd is probabilities, third is incidences per year\n"); |
fprintf(ficgp,"#model=1+age+%s \n",model); |
fprintf(ficgp,"#model=1+age+%s \n",model); |
fprintf(ficgp,"# Type of graphic ng=%d\n",ng); |
fprintf(ficgp,"# Type of graphic ng=%d\n",ng); |
fprintf(ficgp,"# k1=1 to 2^%d=%d\n",cptcoveff,m);/* to be checked */ |
/* fprintf(ficgp,"# k1=1 to 2^%d=%d\n",cptcoveff,m);/\* to be checked *\/ */ |
|
fprintf(ficgp,"# k1=1 to 2^%d=%d\n",cptcovs,m);/* to be checked */ |
/* for(k1=1; k1 <=m; k1++) /\* For each combination of covariate *\/ */ |
/* for(k1=1; k1 <=m; k1++) /\* For each combination of covariate *\/ */ |
for(nres=1; nres <= nresult; nres++){ /* For each resultline */ |
for(nres=1; nres <= nresult; nres++){ /* For each resultline */ |
/* k1=nres; */ |
/* k1=nres; */ |
Line 9254 set ter svg size 640, 480\nunset log y\n
|
Line 9479 set ter svg size 640, 480\nunset log y\n
|
} /* end Tprod */ |
} /* end Tprod */ |
} |
} |
break; |
break; |
|
case 3: |
|
if(cptcovdageprod >0){ |
|
/* if(j==Tprod[ijp]) { */ /* not necessary */ |
|
/* printf("Tprod[%d]=%d, j=%d\n", ij, Tprod[ijp], j); */ |
|
if(ijp <=cptcovprod) { /* Product Vn*Vm and age*VN*Vm*/ |
|
if(DummyV[Tvardk[ijp][1]]==0){/* Vn is dummy */ |
|
if(DummyV[Tvardk[ijp][2]]==0){/* Vn and Vm are dummy */ |
|
/* fprintf(ficgp,"+p%d*%d*%d",i+j+2+nagesqr-1,nbcode[Tvard[ijp][1]][codtabm(k1,j)],nbcode[Tvard[ijp][2]][codtabm(k1,j)]); */ |
|
fprintf(ficgp,"+p%d*%d*%d*x",i+j+2+nagesqr-1,Tinvresult[nres][Tvard[ijp][1]],Tinvresult[nres][Tvard[ijp][2]]); |
|
}else{ /* Vn is dummy and Vm is quanti */ |
|
/* fprintf(ficgp,"+p%d*%d*%f",i+j+2+nagesqr-1,nbcode[Tvard[ijp][1]][codtabm(k1,j)],Tqinvresult[nres][Tvard[ijp][2]]); */ |
|
fprintf(ficgp,"+p%d*%d*%f*x",i+j+2+nagesqr-1,Tinvresult[nres][Tvardk[ijp][1]],Tqinvresult[nres][Tvardk[ijp][2]]); |
|
} |
|
}else{ /* age* Vn*Vm Vn is quanti HERE */ |
|
if(DummyV[Tvard[ijp][2]]==0){ |
|
fprintf(ficgp,"+p%d*%d*%f*x",i+j+2+nagesqr-1,Tinvresult[nres][Tvardk[ijp][2]],Tqinvresult[nres][Tvardk[ijp][1]]); |
|
}else{ /* Both quanti */ |
|
fprintf(ficgp,"+p%d*%f*%f*x",i+j+2+nagesqr-1,Tqinvresult[nres][Tvardk[ijp][1]],Tqinvresult[nres][Tvardk[ijp][2]]); |
|
} |
|
} |
|
ijp++; |
|
} |
|
/* } */ /* end Tprod */ |
|
} |
|
break; |
case 0: |
case 0: |
/* simple covariate */ |
/* simple covariate */ |
/* fprintf(ficgp,"+p%d*%d",i+j+2+nagesqr-1,nbcode[Tvar[j]][codtabm(k1,j)]); /\* Valgrind bug nbcode *\/ */ |
/* fprintf(ficgp,"+p%d*%d",i+j+2+nagesqr-1,nbcode[Tvar[j]][codtabm(k1,j)]); /\* Valgrind bug nbcode *\/ */ |
Line 9340 set ter svg size 640, 480\nunset log y\n
|
Line 9590 set ter svg size 640, 480\nunset log y\n
|
} /* end Tprod */ |
} /* end Tprod */ |
} /* end if */ |
} /* end if */ |
break; |
break; |
|
case 3: |
|
if(cptcovdageprod >0){ |
|
/* if(j==Tprod[ijp]) { /\* *\/ */ |
|
/* printf("Tprod[%d]=%d, j=%d\n", ij, Tprod[ijp], j); */ |
|
if(ijp <=cptcovprod) { /* Product */ |
|
if(DummyV[Tvardk[ijp][1]]==0){/* Vn is dummy */ |
|
if(DummyV[Tvardk[ijp][2]]==0){/* Vn and Vm are dummy */ |
|
/* fprintf(ficgp,"+p%d*%d*%d",i+j+2+nagesqr-1,nbcode[Tvard[ijp][1]][codtabm(k1,j)],nbcode[Tvard[ijp][2]][codtabm(k1,j)]); */ |
|
fprintf(ficgp,"+p%d*%d*%d*x",k3+(cpt-1)*ncovmodel+1+j+nagesqr,Tinvresult[nres][Tvardk[ijp][1]],Tinvresult[nres][Tvardk[ijp][2]]); |
|
/* fprintf(ficgp,"+p%d*%d*%d",i+j+2+nagesqr-1,Tinvresult[nres][Tvard[ijp][1]],Tinvresult[nres][Tvard[ijp][2]]); */ |
|
}else{ /* Vn is dummy and Vm is quanti */ |
|
/* fprintf(ficgp,"+p%d*%d*%f",i+j+2+nagesqr-1,nbcode[Tvard[ijp][1]][codtabm(k1,j)],Tqinvresult[nres][Tvard[ijp][2]]); */ |
|
fprintf(ficgp,"+p%d*%d*%f*x",k3+(cpt-1)*ncovmodel+1+j+nagesqr,Tinvresult[nres][Tvardk[ijp][1]],Tqinvresult[nres][Tvardk[ijp][2]]); |
|
/* fprintf(ficgp,"+p%d*%d*%f*x",i+j+2+nagesqr-1,Tinvresult[nres][Tvard[ijp][1]],Tqinvresult[nres][Tvard[ijp][2]]); */ |
|
} |
|
}else{ /* Vn*Vm Vn is quanti */ |
|
if(DummyV[Tvardk[ijp][2]]==0){ |
|
fprintf(ficgp,"+p%d*%d*%f",k3+(cpt-1)*ncovmodel+1+j+nagesqr,Tinvresult[nres][Tvardk[ijp][2]],Tqinvresult[nres][Tvardk[ijp][1]]); |
|
/* fprintf(ficgp,"+p%d*%d*%f*x",i+j+2+nagesqr-1,Tinvresult[nres][Tvard[ijp][2]],Tqinvresult[nres][Tvard[ijp][1]]); */ |
|
}else{ /* Both quanti */ |
|
fprintf(ficgp,"+p%d*%f*%f",k3+(cpt-1)*ncovmodel+1+j+nagesqr,Tqinvresult[nres][Tvardk[ijp][1]],Tqinvresult[nres][Tvardk[ijp][2]]); |
|
/* fprintf(ficgp,"+p%d*%f*%f*x",i+j+2+nagesqr-1,Tqinvresult[nres][Tvard[ijp][1]],Tqinvresult[nres][Tvard[ijp][2]]); */ |
|
} |
|
} |
|
ijp++; |
|
} |
|
/* } /\* end Tprod *\/ */ |
|
} /* end if */ |
|
break; |
case 0: |
case 0: |
/* simple covariate */ |
/* simple covariate */ |
/* fprintf(ficgp,"+p%d*%d",i+j+2+nagesqr-1,nbcode[Tvar[j]][codtabm(k1,j)]); /\* Valgrind bug nbcode *\/ */ |
/* fprintf(ficgp,"+p%d*%d",i+j+2+nagesqr-1,nbcode[Tvar[j]][codtabm(k1,j)]); /\* Valgrind bug nbcode *\/ */ |
Line 9693 void prevforecast(char fileres[], double
|
Line 9972 void prevforecast(char fileres[], double
|
/* date2dmy(dateintmean,&jintmean,&mintmean,&aintmean); */ |
/* date2dmy(dateintmean,&jintmean,&mintmean,&aintmean); */ |
/* date2dmy(dateprojd,&jprojd, &mprojd, &anprojd); */ |
/* date2dmy(dateprojd,&jprojd, &mprojd, &anprojd); */ |
/* date2dmy(dateprojf,&jprojf, &mprojf, &anprojf); */ |
/* date2dmy(dateprojf,&jprojf, &mprojf, &anprojf); */ |
i1=pow(2,cptcoveff); |
/* i1=pow(2,cptcoveff); */ |
if (cptcovn < 1){i1=1;} |
/* if (cptcovn < 1){i1=1;} */ |
|
|
fprintf(ficresf,"# Mean day of interviews %.lf/%.lf/%.lf (%.2f) between %.2f and %.2f \n",jintmean,mintmean,aintmean,dateintmean,dateprev1,dateprev2); |
fprintf(ficresf,"# Mean day of interviews %.lf/%.lf/%.lf (%.2f) between %.2f and %.2f \n",jintmean,mintmean,aintmean,dateintmean,dateprev1,dateprev2); |
|
|
fprintf(ficresf,"#****** Routine prevforecast **\n"); |
fprintf(ficresf,"#****** Routine prevforecast **\n"); |
|
|
/* if (h==(int)(YEARM*yearp)){ */ |
/* if (h==(int)(YEARM*yearp)){ */ |
for(nres=1; nres <= nresult; nres++) /* For each resultline */ |
for(nres=1; nres <= nresult; nres++){ /* For each resultline */ |
for(k=1; k<=i1;k++){ /* We want to find the combination k corresponding to the values of the dummies given in this resut line (to be cleaned one day) */ |
k=TKresult[nres]; |
if(i1 != 1 && TKresult[nres]!= k) |
if(TKresult[nres]==0) k=1; /* To be checked for noresult */ |
continue; |
/* for(k=1; k<=i1;k++){ /\* We want to find the combination k corresponding to the values of the dummies given in this resut line (to be cleaned one day) *\/ */ |
if(invalidvarcomb[k]){ |
/* if(i1 != 1 && TKresult[nres]!= k) */ |
printf("\nCombination (%d) projection ignored because no cases \n",k); |
/* continue; */ |
continue; |
/* if(invalidvarcomb[k]){ */ |
} |
/* printf("\nCombination (%d) projection ignored because no cases \n",k); */ |
|
/* continue; */ |
|
/* } */ |
fprintf(ficresf,"\n#****** hpijx=probability over h years, hp.jx is weighted by observed prev \n#"); |
fprintf(ficresf,"\n#****** hpijx=probability over h years, hp.jx is weighted by observed prev \n#"); |
for(j=1;j<=cptcoveff;j++) { |
for(j=1;j<=cptcovs;j++){ |
/* fprintf(ficresf," V%d (=) %d",Tvaraff[j],nbcode[Tvaraff[j]][codtabm(k,Tvaraff[j])]); */ |
/* for(j=1;j<=cptcoveff;j++) { */ |
fprintf(ficresf," V%d (=) %d",Tvaraff[j],nbcode[Tvaraff[j]][codtabm(k,TnsdVar[Tvaraff[j]])]); |
/* /\* fprintf(ficresf," V%d (=) %d",Tvaraff[j],nbcode[Tvaraff[j]][codtabm(k,Tvaraff[j])]); *\/ */ |
} |
/* fprintf(ficresf," V%d (=) %d",Tvaraff[j],nbcode[Tvaraff[j]][codtabm(k,TnsdVar[Tvaraff[j]])]); */ |
for (k4=1; k4<= nsq; k4++){ /* For each selected (single) quantitative value */ |
/* } */ |
fprintf(ficresf," V%d=%f ",Tvqresult[nres][k4],Tqresult[nres][k4]); |
/* for (k4=1; k4<= nsq; k4++){ /\* For each selected (single) quantitative value *\/ */ |
|
/* fprintf(ficresf," V%d=%f ",Tvqresult[nres][k4],Tqresult[nres][k4]); */ |
|
/* } */ |
|
fprintf(ficresf," V%d=%lg ",Tvresult[nres][j],TinvDoQresult[nres][Tvresult[nres][j]]); |
} |
} |
|
|
fprintf(ficresf," yearproj age"); |
fprintf(ficresf," yearproj age"); |
for(j=1; j<=nlstate+ndeath;j++){ |
for(j=1; j<=nlstate+ndeath;j++){ |
for(i=1; i<=nlstate;i++) |
for(i=1; i<=nlstate;i++) |
Line 9741 void prevforecast(char fileres[], double
|
Line 10026 void prevforecast(char fileres[], double
|
} |
} |
} |
} |
fprintf(ficresf,"\n"); |
fprintf(ficresf,"\n"); |
for(j=1;j<=cptcoveff;j++) |
/* for(j=1;j<=cptcoveff;j++) */ |
|
for(j=1;j<=cptcovs;j++) |
|
fprintf(ficresf,"%d %lg ",Tvresult[nres][j],TinvDoQresult[nres][Tvresult[nres][j]]); |
/* fprintf(ficresf,"%d %d ",Tvaraff[j],nbcode[Tvaraff[j]][codtabm(k,Tvaraff[j])]); /\* Tvaraff not correct *\/ */ |
/* fprintf(ficresf,"%d %d ",Tvaraff[j],nbcode[Tvaraff[j]][codtabm(k,Tvaraff[j])]); /\* Tvaraff not correct *\/ */ |
fprintf(ficresf,"%d %d ",Tvaraff[j],nbcode[Tvaraff[j]][codtabm(k,TnsdVar[Tvaraff[j]])]); /* TnsdVar[Tvaraff] correct */ |
/* fprintf(ficresf,"%d %d ",Tvaraff[j],nbcode[Tvaraff[j]][codtabm(k,TnsdVar[Tvaraff[j]])]); /\* TnsdVar[Tvaraff] correct *\/ */ |
fprintf(ficresf,"%.f %.f ",anprojd+yearp,agec+h*hstepm/YEARM*stepm); |
fprintf(ficresf,"%.f %.f ",anprojd+yearp,agec+h*hstepm/YEARM*stepm); |
|
|
for(j=1; j<=nlstate+ndeath;j++) { |
for(j=1; j<=nlstate+ndeath;j++) { |
Line 9835 void prevforecast(char fileres[], double
|
Line 10122 void prevforecast(char fileres[], double
|
/* if(jintmean==0) jintmean=1; */ |
/* if(jintmean==0) jintmean=1; */ |
/* if(mintmean==0) jintmean=1; */ |
/* if(mintmean==0) jintmean=1; */ |
|
|
i1=pow(2,cptcoveff); |
/* i1=pow(2,cptcoveff); */ |
if (cptcovn < 1){i1=1;} |
/* if (cptcovn < 1){i1=1;} */ |
|
|
fprintf(ficresfb,"# Mean day of interviews %.lf/%.lf/%.lf (%.2f) between %.2f and %.2f \n",jintmean,mintmean,aintmean,dateintmean,dateprev1,dateprev2); |
fprintf(ficresfb,"# Mean day of interviews %.lf/%.lf/%.lf (%.2f) between %.2f and %.2f \n",jintmean,mintmean,aintmean,dateintmean,dateprev1,dateprev2); |
printf("# Mean day of interviews %.lf/%.lf/%.lf (%.2f) between %.2f and %.2f \n",jintmean,mintmean,aintmean,dateintmean,dateprev1,dateprev2); |
printf("# Mean day of interviews %.lf/%.lf/%.lf (%.2f) between %.2f and %.2f \n",jintmean,mintmean,aintmean,dateintmean,dateprev1,dateprev2); |
|
|
fprintf(ficresfb,"#****** Routine prevbackforecast **\n"); |
fprintf(ficresfb,"#****** Routine prevbackforecast **\n"); |
|
|
for(nres=1; nres <= nresult; nres++) /* For each resultline */ |
for(nres=1; nres <= nresult; nres++){ /* For each resultline */ |
for(k=1; k<=i1;k++){ |
k=TKresult[nres]; |
if(i1 != 1 && TKresult[nres]!= k) |
if(TKresult[nres]==0) k=1; /* To be checked for noresult */ |
continue; |
/* for(k=1; k<=i1;k++){ */ |
if(invalidvarcomb[k]){ |
/* if(i1 != 1 && TKresult[nres]!= k) */ |
printf("\nCombination (%d) projection ignored because no cases \n",k); |
/* continue; */ |
continue; |
/* if(invalidvarcomb[k]){ */ |
} |
/* printf("\nCombination (%d) projection ignored because no cases \n",k); */ |
|
/* continue; */ |
|
/* } */ |
fprintf(ficresfb,"\n#****** hbijx=probability over h years, hb.jx is weighted by observed prev \n#"); |
fprintf(ficresfb,"\n#****** hbijx=probability over h years, hb.jx is weighted by observed prev \n#"); |
for(j=1;j<=cptcoveff;j++) { |
for(j=1;j<=cptcovs;j++){ |
fprintf(ficresfb," V%d (=) %d",Tvaraff[j],nbcode[Tvaraff[j]][codtabm(k,TnsdVar[Tvaraff[j]])]); |
/* for(j=1;j<=cptcoveff;j++) { */ |
} |
/* fprintf(ficresfb," V%d (=) %d",Tvaraff[j],nbcode[Tvaraff[j]][codtabm(k,TnsdVar[Tvaraff[j]])]); */ |
for (k4=1; k4<= nsq; k4++){ /* For each selected (single) quantitative value */ |
/* } */ |
fprintf(ficresf," V%d=%f ",Tvqresult[nres][k4],Tqresult[nres][k4]); |
fprintf(ficresfb," V%d=%lg ",Tvresult[nres][j],TinvDoQresult[nres][Tvresult[nres][j]]); |
} |
} |
|
/* fprintf(ficrespij,"******\n"); */ |
|
/* for (k4=1; k4<= nsq; k4++){ /\* For each selected (single) quantitative value *\/ */ |
|
/* fprintf(ficresfb," V%d=%f ",Tvqresult[nres][k4],Tqresult[nres][k4]); */ |
|
/* } */ |
fprintf(ficresfb," yearbproj age"); |
fprintf(ficresfb," yearbproj age"); |
for(j=1; j<=nlstate+ndeath;j++){ |
for(j=1; j<=nlstate+ndeath;j++){ |
for(i=1; i<=nlstate;i++) |
for(i=1; i<=nlstate;i++) |
Line 9888 void prevforecast(char fileres[], double
|
Line 10181 void prevforecast(char fileres[], double
|
} |
} |
} |
} |
fprintf(ficresfb,"\n"); |
fprintf(ficresfb,"\n"); |
for(j=1;j<=cptcoveff;j++) |
/* for(j=1;j<=cptcoveff;j++) */ |
fprintf(ficresfb,"%d %d ",Tvaraff[j],nbcode[Tvaraff[j]][codtabm(k,TnsdVar[Tvaraff[j]])]); |
for(j=1;j<=cptcovs;j++) |
|
fprintf(ficresfb,"%d %lg ",Tvresult[nres][j],TinvDoQresult[nres][Tvresult[nres][j]]); |
|
/* fprintf(ficresfb,"%d %d ",Tvaraff[j],nbcode[Tvaraff[j]][codtabm(k,TnsdVar[Tvaraff[j]])]); */ |
fprintf(ficresfb,"%.f %.f ",anbackd+yearp,agec-h*hstepm/YEARM*stepm); |
fprintf(ficresfb,"%.f %.f ",anbackd+yearp,agec-h*hstepm/YEARM*stepm); |
for(i=1; i<=nlstate+ndeath;i++) { |
for(i=1; i<=nlstate+ndeath;i++) { |
ppij=0.;ppi=0.; |
ppij=0.;ppi=0.; |
Line 10490 int readdata(char datafile[], int firsto
|
Line 10785 int readdata(char datafile[], int firsto
|
char stra[MAXLINE], strb[MAXLINE]; |
char stra[MAXLINE], strb[MAXLINE]; |
char *stratrunc; |
char *stratrunc; |
|
|
DummyV=ivector(1,NCOVMAX); /* 1 to 3 */ |
/* DummyV=ivector(-1,NCOVMAX); /\* 1 to 3 *\/ */ |
FixedV=ivector(1,NCOVMAX); /* 1 to 3 */ |
/* FixedV=ivector(-1,NCOVMAX); /\* 1 to 3 *\/ */ |
for(v=1;v<NCOVMAX;v++){ |
|
DummyV[v]=0; |
|
FixedV[v]=0; |
|
} |
|
|
|
for(v=1; v <=ncovcol;v++){ |
|
DummyV[v]=0; |
|
FixedV[v]=0; |
|
} |
|
for(v=ncovcol+1; v <=ncovcol+nqv;v++){ |
|
DummyV[v]=1; |
|
FixedV[v]=0; |
|
} |
|
for(v=ncovcol+nqv+1; v <=ncovcol+nqv+ntv;v++){ |
|
DummyV[v]=0; |
|
FixedV[v]=1; |
|
} |
|
for(v=ncovcol+nqv+ntv+1; v <=ncovcol+nqv+ntv+nqtv;v++){ |
|
DummyV[v]=1; |
|
FixedV[v]=1; |
|
} |
|
for(v=1; v <=ncovcol+nqv+ntv+nqtv;v++){ |
|
printf("Covariate type in the data: V%d, DummyV(V%d)=%d, FixedV(V%d)=%d\n",v,v,DummyV[v],v,FixedV[v]); |
|
fprintf(ficlog,"Covariate type in the data: V%d, DummyV(V%d)=%d, FixedV(V%d)=%d\n",v,v,DummyV[v],v,FixedV[v]); |
|
} |
|
|
|
ncovcolt=ncovcol+nqv+ntv+nqtv; /* total of covariates in the data, not in the model equation */ |
ncovcolt=ncovcol+nqv+ntv+nqtv; /* total of covariates in the data, not in the model equation */ |
|
|
Line 10878 int decoderesult( char resultline[], int
|
Line 11148 int decoderesult( char resultline[], int
|
if (strlen(resultsav) >1){ |
if (strlen(resultsav) >1){ |
j=nbocc(resultsav,'='); /**< j=Number of covariate values'=' in this resultline */ |
j=nbocc(resultsav,'='); /**< j=Number of covariate values'=' in this resultline */ |
} |
} |
if(j == 0){ /* Resultline but no = */ |
if(j == 0 && cptcovs== 0){ /* Resultline but no = and no covariate in the model */ |
TKresult[nres]=0; /* Combination for the nresult and the model */ |
TKresult[nres]=0; /* Combination for the nresult and the model */ |
return (0); |
return (0); |
} |
} |
if( j != cptcovs ){ /* Be careful if a variable is in a product but not single */ |
if( j != cptcovs ){ /* Be careful if a variable is in a product but not single */ |
printf("ERROR: the number of variables in the resultline which is %d, differs from the number %d of single variables used in the model line, %s.\n",j, cptcovs, model); |
fprintf(ficlog,"ERROR: the number of variables in the resultline which is %d, differs from the number %d of single variables used in the model line, 1+age+%s.\n",j, cptcovs, model);fflush(ficlog); |
fprintf(ficlog,"ERROR: the number of variables in the resultline which is %d, differs from the number %d of single variables used in the model line, %s.\n",j, cptcovs, model); |
printf("ERROR: the number of variables in the resultline which is %d, differs from the number %d of single variables used in the model line, 1+age+%s.\n",j, cptcovs, model);fflush(stdout); |
/* return 1;*/ |
if(j==0) |
|
return 1; |
} |
} |
for(k=1; k<=j;k++){ /* Loop on any covariate of the RESULT LINE */ |
for(k=1; k<=j;k++){ /* Loop on any covariate of the RESULT LINE */ |
if(nbocc(resultsav,'=') >1){ |
if(nbocc(resultsav,'=') >1){ |
Line 10944 int decoderesult( char resultline[], int
|
Line 11215 int decoderesult( char resultline[], int
|
fprintf(ficlog,"Error in result line (Product with age): V%d is missing in result: %s according to model=1+age+%s (Tvarsel[k2=%d]=%d)\n",Tvar[k1], resultline, model, k2, Tvarsel[k2]); |
fprintf(ficlog,"Error in result line (Product with age): V%d is missing in result: %s according to model=1+age+%s (Tvarsel[k2=%d]=%d)\n",Tvar[k1], resultline, model, k2, Tvarsel[k2]); |
return 1; |
return 1; |
} |
} |
}else if(Typevar[k1]==2){ /* Product No age We want to get the position in the resultline of the product in the model line*/ |
}else if(Typevar[k1]==2 || Typevar[k1]==3){ /* Product with or without age. We want to get the position in the resultline of the product in the model line*/ |
/* resultmodel[nres][of such a Vn * Vm product k1] is not unique, so can't exist, we feed Tvard[k1][1] and [2] */ |
/* resultmodel[nres][of such a Vn * Vm product k1] is not unique, so can't exist, we feed Tvard[k1][1] and [2] */ |
match=0; |
match=0; |
/* printf("Decoderesult very first Product Tvardk[k1=%d][1]=%d Tvardk[k1=%d][2]=%d V%d * V%d\n",k1,Tvardk[k1][1],k1,Tvardk[k1][2],Tvardk[k1][1],Tvardk[k1][2]); */ |
/* printf("Decoderesult very first Product Tvardk[k1=%d][1]=%d Tvardk[k1=%d][2]=%d V%d * V%d\n",k1,Tvardk[k1][1],k1,Tvardk[k1][2],Tvardk[k1][1],Tvardk[k1][2]); */ |
Line 10956 int decoderesult( char resultline[], int
|
Line 11227 int decoderesult( char resultline[], int
|
} |
} |
} |
} |
if(match == 0){ |
if(match == 0){ |
printf("Error in result line (Product without age first variable): V%d is missing in result: %s according to model=1+age+%s\n",Tvardk[k1][1], resultline, model); |
printf("Error in result line (Product without age first variable or double product with age): V%d is missing in result: %s according to model=1+age+%s\n",Tvardk[k1][1], resultline, model); |
fprintf(ficlog,"Error in result line (Product without age first variable): V%d is missing in result: %s according to model=1+age+%s\n",Tvardk[k1][1], resultline, model); |
fprintf(ficlog,"Error in result line (Product without age first variable or double product with age): V%d is missing in result: %s according to model=1+age+%s\n",Tvardk[k1][1], resultline, model); |
return 1; |
return 1; |
} |
} |
match=0; |
match=0; |
Line 10970 int decoderesult( char resultline[], int
|
Line 11241 int decoderesult( char resultline[], int
|
} |
} |
} |
} |
if(match == 0){ |
if(match == 0){ |
printf("Error in result line (Product without age second variable): V%d is missing in result: %s according to model=1+age+%s\n",Tvardk[k1][2], resultline, model); |
printf("Error in result line (Product without age second variable or double product with age): V%d is missing in result: %s according to model=1+age+%s\n",Tvardk[k1][2], resultline, model); |
fprintf(ficlog,"Error in result line (Product without age second variable): V%d is missing in result : %s according to model=1+age+%s\n",Tvardk[k1][2], resultline, model); |
fprintf(ficlog,"Error in result line (Product without age second variable or double product with age): V%d is missing in result : %s according to model=1+age+%s\n",Tvardk[k1][2], resultline, model); |
return 1; |
return 1; |
} |
} |
}/* End of testing */ |
}/* End of testing */ |
Line 10983 int decoderesult( char resultline[], int
|
Line 11254 int decoderesult( char resultline[], int
|
match=0; |
match=0; |
for(k1=1; k1<= cptcovt ;k1++){ /* loop on model: model line V5+V4+V3+V4*V3+V5*age+V2+V1*V2+V1*age+V1 */ |
for(k1=1; k1<= cptcovt ;k1++){ /* loop on model: model line V5+V4+V3+V4*V3+V5*age+V2+V1*V2+V1*age+V1 */ |
if(Typevar[k1]==0){ /* Single only */ |
if(Typevar[k1]==0){ /* Single only */ |
if(Tvar[k1]==Tvarsel[k2]) { /* Tvar[2]=4 == Tvarsel[1]=4 */ |
if(Tvar[k1]==Tvarsel[k2]) { /* Tvar[2]=4 == Tvarsel[1]=4 What if a product? */ |
resultmodel[nres][k1]=k2; /* k1th position in the model equation corresponds to k2th position in the result line. resultmodel[2]=1 resultmodel[1]=2 resultmodel[3]=3 resultmodel[6]=4 resultmodel[9]=5 */ |
resultmodel[nres][k1]=k2; /* k1th position in the model equation corresponds to k2th position in the result line. resultmodel[2]=1 resultmodel[1]=2 resultmodel[3]=3 resultmodel[6]=4 resultmodel[9]=5 */ |
modelresult[nres][k2]=k1; /* k1th position in the model equation corresponds to k2th position in the result line. modelresult[1]=2 modelresult[2]=1 modelresult[3]=3 remodelresult[4]=6 modelresult[5]=9 */ |
modelresult[nres][k2]=k1; /* k1th position in the model equation corresponds to k2th position in the result line. modelresult[1]=2 modelresult[2]=1 modelresult[3]=3 remodelresult[4]=6 modelresult[5]=9 */ |
++match; |
++match; |
Line 11068 int decoderesult( char resultline[], int
|
Line 11339 int decoderesult( char resultline[], int
|
precov[nres][k1]=Tvalsel[k3q]; |
precov[nres][k1]=Tvalsel[k3q]; |
/* printf("Decoderesult Quantitative nres=%d,precov[nres=%d][k1=%d]=%.f V(k2q=V%d)= Tvalsel[%d]=%d, Tvarsel[%d]=%f\n",nres, nres, k1,precov[nres][k1], k2q, k3q, Tvarsel[k3q], k3q, Tvalsel[k3q]); */ |
/* printf("Decoderesult Quantitative nres=%d,precov[nres=%d][k1=%d]=%.f V(k2q=V%d)= Tvalsel[%d]=%d, Tvarsel[%d]=%f\n",nres, nres, k1,precov[nres][k1], k2q, k3q, Tvarsel[k3q], k3q, Tvalsel[k3q]); */ |
k4q++;; |
k4q++;; |
}else if( Dummy[k1]==2 ){ /* For dummy with age product */ |
}else if( Dummy[k1]==2 ){ /* For dummy with age product "V2+V3+V4+V6+V7+V6*V2+V7*V2+V6*V3+V7*V3+V6*V4+V7*V4+age*V2+age*V3+age*V4+age*V6+age*V7+age*V6*V2+age*V6*V3+age*V7*V3+age*V6*V4+age*V7*V4\r"*/ |
/* Tvar[k1]; */ /* Age variable */ |
/* Tvar[k1]; */ /* Age variable */ /* 17 age*V6*V2 ?*/ |
/* Wrong we want the value of variable name Tvar[k1] */ |
/* Wrong we want the value of variable name Tvar[k1] */ |
|
if(Typevar[k1]==2 || Typevar[k1]==3 ){ /* For product quant or dummy (with or without age) */ |
k3= resultmodel[nres][k1]; /* nres=1 k1=2 resultmodel[2(V4)] = 1=k3 ; k1=3 resultmodel[3(V3)] = 2=k3*/ |
precov[nres][k1]=TinvDoQresult[nres][Tvardk[k1][1]] * TinvDoQresult[nres][Tvardk[k1][2]]; |
k2=(int)Tvarsel[k3]; /* nres=1 k1=2=>k3=1 Tvarsel[resultmodel[2]]= Tvarsel[1] = 4=k2 (V4); k1=3=>k3=2 Tvarsel[2]=3 (V3)*/ |
/* printf("Decoderesult Quantitative or Dummy (not with age) nres=%d k1=%d precov[nres=%d][k1=%d]=%.f V%d(=%.f) * V%d(=%.f) \n",nres, k1, nres, k1,precov[nres][k1], Tvardk[k1][1], TinvDoQresult[nres][Tvardk[k1][1]], Tvardk[k1][2], TinvDoQresult[nres][Tvardk[k1][2]]); */ |
TinvDoQresult[nres][(int)Tvarsel[k3]]=Tvalsel[k3]; /* TinvDoQresult[nres][4]=1 */ |
}else{ |
precov[nres][k1]=Tvalsel[k3]; |
k3= resultmodel[nres][k1]; /* nres=1 k1=2 resultmodel[2(V4)] = 1=k3 ; k1=3 resultmodel[3(V3)] = 2=k3*/ |
|
k2=(int)Tvarsel[k3]; /* nres=1 k1=2=>k3=1 Tvarsel[resultmodel[2]]= Tvarsel[1] = 4=k2 (V4); k1=3=>k3=2 Tvarsel[2]=3 (V3)*/ |
|
TinvDoQresult[nres][(int)Tvarsel[k3]]=Tvalsel[k3]; /* TinvDoQresult[nres][4]=1 */ |
|
precov[nres][k1]=Tvalsel[k3]; |
|
} |
/* printf("Decoderesult Dummy with age k=%d, k1=%d precov[nres=%d][k1=%d]=%.f Tvar[%d]=V%d k2=Tvarsel[%d]=%d Tvalsel[%d]=%d\n",k, k1, nres, k1,precov[nres][k1], k1, Tvar[k1], k3,(int)Tvarsel[k3], k3, (int)Tvalsel[k3]); */ |
/* printf("Decoderesult Dummy with age k=%d, k1=%d precov[nres=%d][k1=%d]=%.f Tvar[%d]=V%d k2=Tvarsel[%d]=%d Tvalsel[%d]=%d\n",k, k1, nres, k1,precov[nres][k1], k1, Tvar[k1], k3,(int)Tvarsel[k3], k3, (int)Tvalsel[k3]); */ |
}else if( Dummy[k1]==3 ){ /* For quant with age product */ |
}else if( Dummy[k1]==3 ){ /* For quant with age product */ |
k3q= resultmodel[nres][k1]; /* resultmodel[1(V5)] = 25.1=k3q */ |
if(Typevar[k1]==2 || Typevar[k1]==3 ){ /* For product quant or dummy (with or without age) */ |
k2q=(int)Tvarsel[k3q]; /* Tvarsel[resultmodel[1]]= Tvarsel[1] = 4=k2 */ |
precov[nres][k1]=TinvDoQresult[nres][Tvardk[k1][1]] * TinvDoQresult[nres][Tvardk[k1][2]]; |
TinvDoQresult[nres][(int)Tvarsel[k3q]]=Tvalsel[k3q]; /* TinvDoQresult[nres][5]=25.1 */ |
/* printf("Decoderesult Quantitative or Dummy (not with age) nres=%d k1=%d precov[nres=%d][k1=%d]=%.f V%d(=%.f) * V%d(=%.f) \n",nres, k1, nres, k1,precov[nres][k1], Tvardk[k1][1], TinvDoQresult[nres][Tvardk[k1][1]], Tvardk[k1][2], TinvDoQresult[nres][Tvardk[k1][2]]); */ |
precov[nres][k1]=Tvalsel[k3q]; |
}else{ |
|
k3q= resultmodel[nres][k1]; /* resultmodel[1(V5)] = 25.1=k3q */ |
|
k2q=(int)Tvarsel[k3q]; /* Tvarsel[resultmodel[1]]= Tvarsel[1] = 4=k2 */ |
|
TinvDoQresult[nres][(int)Tvarsel[k3q]]=Tvalsel[k3q]; /* TinvDoQresult[nres][5]=25.1 */ |
|
precov[nres][k1]=Tvalsel[k3q]; |
|
} |
/* printf("Decoderesult Quantitative with age nres=%d, k1=%d, precov[nres=%d][k1=%d]=%f Tvar[%d]=V%d V(k2q=%d)= Tvarsel[%d]=%d, Tvalsel[%d]=%f\n",nres, k1, nres, k1,precov[nres][k1], k1, Tvar[k1], k2q, k3q, Tvarsel[k3q], k3q, Tvalsel[k3q]); */ |
/* printf("Decoderesult Quantitative with age nres=%d, k1=%d, precov[nres=%d][k1=%d]=%f Tvar[%d]=V%d V(k2q=%d)= Tvarsel[%d]=%d, Tvalsel[%d]=%f\n",nres, k1, nres, k1,precov[nres][k1], k1, Tvar[k1], k2q, k3q, Tvarsel[k3q], k3q, Tvalsel[k3q]); */ |
}else if(Typevar[k1]==2 ){ /* For product quant or dummy (not with age) */ |
}else if(Typevar[k1]==2 || Typevar[k1]==3 ){ /* For product quant or dummy (with or without age) */ |
precov[nres][k1]=TinvDoQresult[nres][Tvardk[k1][1]] * TinvDoQresult[nres][Tvardk[k1][2]]; |
precov[nres][k1]=TinvDoQresult[nres][Tvardk[k1][1]] * TinvDoQresult[nres][Tvardk[k1][2]]; |
/* printf("Decoderesult Quantitative or Dummy (not with age) nres=%d k1=%d precov[nres=%d][k1=%d]=%.f V%d(=%.f) * V%d(=%.f) \n",nres, k1, nres, k1,precov[nres][k1], Tvardk[k1][1], TinvDoQresult[nres][Tvardk[k1][1]], Tvardk[k1][2], TinvDoQresult[nres][Tvardk[k1][2]]); */ |
/* printf("Decoderesult Quantitative or Dummy (not with age) nres=%d k1=%d precov[nres=%d][k1=%d]=%.f V%d(=%.f) * V%d(=%.f) \n",nres, k1, nres, k1,precov[nres][k1], Tvardk[k1][1], TinvDoQresult[nres][Tvardk[k1][1]], Tvardk[k1][2], TinvDoQresult[nres][Tvardk[k1][2]]); */ |
}else{ |
}else{ |
Line 11115 int decodemodel( char model[], int lasto
|
Line 11395 int decodemodel( char model[], int lasto
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/* V2+V1+V4+V3*age Tvar[4]=3 ; V1+V2*age Tvar[2]=2; V1+V1*age Tvar[2]=1, Tage[1]=2 */ |
/* V2+V1+V4+V3*age Tvar[4]=3 ; V1+V2*age Tvar[2]=2; V1+V1*age Tvar[2]=1, Tage[1]=2 */ |
{ |
{ |
int i, j, k, ks, v; |
int i, j, k, ks, v; |
int j1, k1, k2, k3, k4; |
int n,m; |
char modelsav[80]; |
int j1, k1, k11, k12, k2, k3, k4; |
char stra[80], strb[80], strc[80], strd[80],stre[80]; |
char modelsav[300]; |
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char stra[300], strb[300], strc[300], strd[300],stre[300],strf[300]; |
char *strpt; |
char *strpt; |
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int **existcomb; |
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existcomb=imatrix(1,NCOVMAX,1,NCOVMAX); |
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for(i=1;i<=NCOVMAX;i++) |
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for(j=1;j<=NCOVMAX;j++) |
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existcomb[i][j]=0; |
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/*removespace(model);*/ |
/*removespace(model);*/ |
if (strlen(model) >1){ /* If there is at least 1 covariate */ |
if (strlen(model) >1){ /* If there is at least 1 covariate */ |
j=0, j1=0, k1=0, k2=-1, ks=0, cptcovn=0; |
j=0, j1=0, k1=0, k12=0, k2=-1, ks=0, cptcovn=0; |
if (strstr(model,"AGE") !=0){ |
if (strstr(model,"AGE") !=0){ |
printf("Error. AGE must be in lower case 'age' model=1+age+%s. ",model); |
printf("Error. AGE must be in lower case 'age' model=1+age+%s. ",model); |
fprintf(ficlog,"Error. AGE must be in lower case model=1+age+%s. ",model);fflush(ficlog); |
fprintf(ficlog,"Error. AGE must be in lower case model=1+age+%s. ",model);fflush(ficlog); |
Line 11154 int decodemodel( char model[], int lasto
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Line 11441 int decodemodel( char model[], int lasto
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substrchaine(modelsav, model, "age*age"); |
substrchaine(modelsav, model, "age*age"); |
}else |
}else |
nagesqr=0; |
nagesqr=0; |
if (strlen(modelsav) >1){ |
if (strlen(modelsav) >1){ /* V2 +V3 +V4 +V6 +V7 +V6*V2 +V7*V2 +V6*V3 +V7*V3 +V6*V4 +V7*V4 +age*V2 +age*V3 +age*V4 +age*V6 +age*V7 +age*V6*V2 +V7*V2 +age*V6*V3 +age*V7*V3 +age*V6*V4 +age*V7*V4 */ |
j=nbocc(modelsav,'+'); /**< j=Number of '+' */ |
j=nbocc(modelsav,'+'); /**< j=Number of '+' */ |
j1=nbocc(modelsav,'*'); /**< j1=Number of '*' */ |
j1=nbocc(modelsav,'*'); /**< j1=Number of '*' */ |
cptcovs=j+1-j1; /**< Number of simple covariates V1+V1*age+V3 +V3*V4+age*age=> V1 + V3 =5-3=2 */ |
cptcovs=0; /**< Number of simple covariates V1 +V1*age +V3 +V3*V4 +age*age => V1 + V3 =4+1-3=2 Wrong */ |
cptcovt= j+1; /* Number of total covariates in the model, not including |
cptcovt= j+1; /* Number of total covariates in the model, not including |
* cst, age and age*age |
* cst, age and age*age |
* V1+V1*age+ V3 + V3*V4+age*age=> 3+1=4*/ |
* V1+V1*age+ V3 + V3*V4+age*age=> 3+1=4*/ |
/* including age products which are counted in cptcovage. |
/* including age products which are counted in cptcovage. |
* but the covariates which are products must be treated |
* but the covariates which are products must be treated |
* separately: ncovn=4- 2=2 (V1+V3). */ |
* separately: ncovn=4- 2=2 (V1+V3). */ |
cptcovprod=j1; /**< Number of products V1*V2 +v3*age = 2 */ |
cptcovprod=0; /**< Number of products V1*V2 +v3*age = 2 */ |
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cptcovdageprod=0; /* Number of doouble products with age age*Vn*VM or Vn*age*Vm or Vn*Vm*age */ |
cptcovprodnoage=0; /**< Number of covariate products without age: V3*V4 =1 */ |
cptcovprodnoage=0; /**< Number of covariate products without age: V3*V4 =1 */ |
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cptcovprodage=0; |
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/* cptcovprodage=nboccstr(modelsav,"age");*/ |
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/* Design |
/* Design |
* V1 V2 V3 V4 V5 V6 V7 V8 V9 Weight |
* V1 V2 V3 V4 V5 V6 V7 V8 V9 Weight |
Line 11220 int decodemodel( char model[], int lasto
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Line 11509 int decodemodel( char model[], int lasto
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Tvar[k]=0; Tprod[k]=0; Tposprod[k]=0; |
Tvar[k]=0; Tprod[k]=0; Tposprod[k]=0; |
} |
} |
cptcovage=0; |
cptcovage=0; |
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/* First loop in order to calculate */ |
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/* for age*VN*Vm |
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* Provides, Typevar[k], Tage[cptcovage], existcomb[n][m], FixedV[ncovcolt+k12] |
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* Tprod[k1]=k Tposprod[k]=k1; Tvard[k1][1] =m; |
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*/ |
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/* Needs FixedV[Tvardk[k][1]] */ |
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/* For others: |
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* Sets Typevar[k]; |
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* Tvar[k]=ncovcol+nqv+ntv+nqtv+k11; |
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* Tposprod[k]=k11; |
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* Tprod[k11]=k; |
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* Tvardk[k][1] =m; |
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* Needs FixedV[Tvardk[k][1]] == 0 |
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*/ |
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for(k=1; k<=cptcovt;k++){ /* Loop on total covariates of the model line */ |
for(k=1; k<=cptcovt;k++){ /* Loop on total covariates of the model line */ |
cutl(stra,strb,modelsav,'+'); /* keeps in strb after the first '+' cutl from left to right |
cutl(stra,strb,modelsav,'+'); /* keeps in strb after the first '+' cutl from left to right |
modelsav==V2+V1+V5*age+V4+V3*age strb=V3*age stra=V2+V1V5*age+V4 */ /* <model> "V5+V4+V3+V4*V3+V5*age+V1*age+V1" strb="V5" stra="V4+V3+V4*V3+V5*age+V1*age+V1" */ |
modelsav==V2+V1+V5*age+V4+V3*age strb=V3*age stra=V2+V1V5*age+V4 */ /* <model> "V5+V4+V3+V4*V3+V5*age+V1*age+V1" strb="V5" stra="V4+V3+V4*V3+V5*age+V1*age+V1" */ |
Line 11227 int decodemodel( char model[], int lasto
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Line 11532 int decodemodel( char model[], int lasto
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strcpy(strb,modelsav); /* and analyzes it */ |
strcpy(strb,modelsav); /* and analyzes it */ |
/* printf("i=%d a=%s b=%s sav=%s\n",i, stra,strb,modelsav);*/ |
/* printf("i=%d a=%s b=%s sav=%s\n",i, stra,strb,modelsav);*/ |
/*scanf("%d",i);*/ |
/*scanf("%d",i);*/ |
if (strchr(strb,'*')) { /**< Model includes a product V2+V1+V5*age+ V4+V3*age strb=V3*age */ |
if (strchr(strb,'*')) { /**< Model includes a product V2+V1+V5*age+ V4+V3*age strb=V3*age OR double product with age strb=age*V6*V2 or V6*V2*age or V6*age*V2 */ |
cutl(strc,strd,strb,'*'); /**< k=1 strd*strc Vm*Vn: strb=V3*age(input) strc=age strd=V3 ; V3*V2 strc=V2, strd=V3 */ |
cutl(strc,strd,strb,'*'); /**< k=1 strd*strc Vm*Vn: strb=V3*age(input) strc=age strd=V3 ; V3*V2 strc=V2, strd=V3 OR strb=age*V6*V2 strc=V6*V2 strd=age OR c=V2*age OR c=age*V2 */ |
if (strcmp(strc,"age")==0) { /**< Model includes age: Vn*age */ |
if(strchr(strc,'*')) { /**< Model with age and DOUBLE product: allowed since 0.99r44, strc=V6*V2 or V2*age or age*V2, strd=age or V6 or V6 */ |
/* covar is not filled and then is empty */ |
Typevar[k]=3; /* 3 for age and double product age*Vn*Vm varying of fixed */ |
cptcovprod--; |
if(strstr(strc,"age")!=0) { /* It means that strc=V2*age or age*V2 and thus that strd=Vn */ |
cutl(stre,strb,strd,'V'); /* strd=V3(input): stre="3" */ |
cutl(stre,strf,strc,'*') ; /* strf=age or Vm, stre=Vm or age. If strc=V6*V2 then strf=V6 and stre=V2 */ |
Tvar[k]=atoi(stre); /* V2+V1+V5*age+V4+V3*age Tvar[5]=3 ; V1+V2*age Tvar[2]=2; V1+V1*age Tvar[2]=1 */ |
strcpy(strc,strb); /* save strb(=age*Vn*Vm) into strc */ |
Typevar[k]=1; /* 1 for age product */ |
/* We want strb=Vn*Vm */ |
cptcovage++; /* Counts the number of covariates which include age as a product */ |
if(strcmp(strf,"age")==0){ /* strf is "age" so that stre=Vm =V2 . */ |
Tage[cptcovage]=k; /* V2+V1+V4+V3*age Tvar[4]=3, Tage[1] = 4 or V1+V1*age Tvar[2]=1, Tage[1]=2 */ |
strcpy(strb,strd); |
/*printf("stre=%s ", stre);*/ |
strcat(strb,"*"); |
} else if (strcmp(strd,"age")==0) { /* or age*Vn */ |
strcat(strb,stre); |
cptcovprod--; |
}else{ /* strf=Vm If strf=V6 then stre=V2 */ |
cutl(stre,strb,strc,'V'); |
strcpy(strb,strf); |
Tvar[k]=atoi(stre); |
strcat(strb,"*"); |
Typevar[k]=1; /* 1 for age product */ |
strcat(strb,stre); |
cptcovage++; |
strcpy(strd,strb); /* in order for strd to not be "age" for next test (will be Vn*Vm */ |
Tage[cptcovage]=k; |
} |
} else { /* Age is not in the model product V2+V1+V1*V4+V3*age+V3*V2 strb=V3*V2*/ |
/* printf("DEBUG FIXED k=%d, Tage[k]=%d, Tvar[Tage[k]=%d,FixedV[Tvar[Tage[k]]]=%d\n",k,Tage[k],Tvar[Tage[k]],FixedV[Tvar[Tage[k]]]); */ |
/* loops on k1=1 (V3*V2) and k1=2 V4*V3 */ |
/* FixedV[Tvar[Tage[k]]]=0; /\* HERY not sure if V7*V4*age Fixed might not exist yet*\/ */ |
cptcovn++; |
}else{ /* strc=Vn*Vm (and strd=age) and should be strb=Vn*Vm but want to keep original strb double product */ |
cptcovprodnoage++;k1++; |
strcpy(stre,strb); /* save full b in stre */ |
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strcpy(strb,strc); /* save short c in new short b for next block strb=Vn*Vm*/ |
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strcpy(strf,strc); /* save short c in new short f */ |
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cutl(strc,strd,strf,'*'); /* We get strd=Vn and strc=Vm for next block (strb=Vn*Vm)*/ |
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/* strcpy(strc,stre);*/ /* save full e in c for future */ |
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} |
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cptcovdageprod++; /* double product with age Which product is it? */ |
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/* strcpy(strb,strc); /\* strb was age*V6*V2 or V6*V2*age or V6*age*V2 IS now V6*V2 or V2*age or age*V2 *\/ */ |
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/* cutl(strc,strd,strb,'*'); /\* strd= V6 or V2 or age and strc= V2 or age or V2 *\/ */ |
cutl(stre,strb,strc,'V'); /* strc= Vn, stre is n; strb=V3*V2 stre=3 strc=*/ |
cutl(stre,strb,strc,'V'); /* strc= Vn, stre is n; strb=V3*V2 stre=3 strc=*/ |
Tvar[k]=ncovcol+nqv+ntv+nqtv+k1; /* ncovcolt+k1; For model-covariate k tells which data-covariate to use but |
n=atoi(stre); |
because this model-covariate is a construction we invent a new column |
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which is after existing variables ncovcol+nqv+ntv+nqtv + k1 |
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If already ncovcol=4 and model= V2 + V1 + V1*V4 + age*V3 + V3*V2 |
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thus after V4 we invent V5 and V6 because age*V3 will be computed in 4 |
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Tvar[3=V1*V4]=4+1=5 Tvar[5=V3*V2]=4 + 2= 6, Tvar[4=age*V3]=3 etc */ |
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/* Please remark that the new variables are model dependent */ |
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/* If we have 4 variable but the model uses only 3, like in |
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* model= V1 + age*V1 + V2 + V3 + age*V2 + age*V3 + V1*V2 + V1*V3 |
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* k= 1 2 3 4 5 6 7 8 |
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* Tvar[k]=1 1 2 3 2 3 (5 6) (and not 4 5 because of V4 missing) |
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* Tage[kk] [1]= 2 [2]=5 [3]=6 kk=1 to cptcovage=3 |
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* Tvar[Tage[kk]][1]=2 [2]=2 [3]=3 |
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*/ |
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Typevar[k]=2; /* 2 for product */ |
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cutl(strc,strb,strd,'V'); /* strd was Vm, strc is m */ |
cutl(strc,strb,strd,'V'); /* strd was Vm, strc is m */ |
Tprod[k1]=k; /* Tprod[1]=3(=V1*V4) for V2+V1+V1*V4+age*V3+V3*V2 */ |
m=atoi(strc); |
Tposprod[k]=k1; /* Tposprod[3]=1, Tposprod[2]=5 */ |
cptcovage++; /* Counts the number of covariates which include age as a product */ |
Tvard[k1][1] =atoi(strc); /* m 1 for V1*/ |
Tage[cptcovage]=k; /* For age*V3*V2 gives the position in model of covariates associated with age Tage[1]=6 HERY too*/ |
Tvardk[k][1] =atoi(strc); /* m 1 for V1*/ |
if(existcomb[n][m] == 0){ |
Tvard[k1][2] =atoi(stre); /* n 4 for V4*/ |
/* r /home/brouard/Documents/Recherches/REVES/Zachary/Zach-2022/Feinuo_Sun/Feinuo-threeway/femV12V15_3wayintNBe.imach */ |
Tvardk[k][2] =atoi(stre); /* n 4 for V4*/ |
printf("Warning in model combination V%d*V%d should exist in the model before adding V%d*V%d*age !\n",n,m,n,m); |
k2=k2+2; /* k2 is initialize to -1, We want to store the n and m in Vn*Vm at the end of Tvar */ |
fprintf(ficlog,"Warning in model combination V%d*V%d should exist in the model before adding V%d*V%d*age !\n",n,m,n,m); |
/* Tvar[cptcovt+k2]=Tvard[k1][1]; /\* Tvar[(cptcovt=4+k2=1)=5]= 1 (V1) *\/ */ |
fflush(ficlog); |
/* Tvar[cptcovt+k2+1]=Tvard[k1][2]; /\* Tvar[(cptcovt=4+(k2=1)+1)=6]= 4 (V4) *\/ */ |
k1++; /* The combination Vn*Vm will be in the model so we create it at k1 */ |
/*ncovcol=4 and model=V2+V1+V1*V4+age*V3+V3*V2, Tvar[3]=5, Tvar[4]=6, cptcovt=5 */ |
k12++; |
/* 1 2 3 4 5 | Tvar[5+1)=1, Tvar[7]=2 */ |
existcomb[n][m]=k1; |
if( FixedV[Tvardk[k][1]] == 0 && FixedV[Tvardk[k][2]] == 0){ /* If the product is a fixed covariate then we feed the new column with Vn*Vm */ |
existcomb[m][n]=k1; |
for (i=1; i<=lastobs;i++){/* For fixed product */ |
Tvar[k]=ncovcol+nqv+ntv+nqtv+k1; |
/* Computes the new covariate which is a product of |
Tprod[k1]=k; /* Tprod[1]=3(=V1*V4) for V2+V1+V1*V4+age*V3+V3*V2+ age*V6*V3 Gives the k position of the k1 double product Vn*Vm or age*Vn*Vm*/ |
covar[n][i]* covar[m][i] and stores it at ncovol+k1 May not be defined */ |
Tposprod[k]=k1; /* Tposprod[3]=1, Tposprod[2]=5 Gives the k1 double product Vn*Vm or age*Vn*Vm at the k position */ |
covar[ncovcolt+k1][i]=covar[atoi(stre)][i]*covar[atoi(strc)][i]; |
Tvard[k1][1] =m; /* m 1 for V1*/ |
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Tvardk[k][1] =m; /* m 1 for V1*/ |
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Tvard[k1][2] =n; /* n 4 for V4*/ |
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Tvardk[k][2] =n; /* n 4 for V4*/ |
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/* Tvar[Tage[cptcovage]]=k1;*/ /* Tvar[6=age*V3*V2]=9 (new fixed covariate) */ /* We don't know about Fixed yet HERE */ |
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if( FixedV[Tvardk[k][1]] == 0 && FixedV[Tvardk[k][2]] == 0){ /* If the product is a fixed covariate then we feed the new column with Vn*Vm */ |
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for (i=1; i<=lastobs;i++){/* For fixed product */ |
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/* Computes the new covariate which is a product of |
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covar[n][i]* covar[m][i] and stores it at ncovol+k1 May not be defined */ |
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covar[ncovcolt+k1][i]=covar[atoi(stre)][i]*covar[atoi(strc)][i]; |
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} |
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cptcovprodage++; /* Counting the number of fixed covariate with age */ |
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FixedV[ncovcolt+k12]=0; /* We expand Vn*Vm */ |
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k12++; |
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FixedV[ncovcolt+k12]=0; |
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}else{ /*End of FixedV */ |
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cptcovprodvage++; /* Counting the number of varying covariate with age */ |
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FixedV[ncovcolt+k12]=1; /* We expand Vn*Vm */ |
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k12++; |
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FixedV[ncovcolt+k12]=1; |
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} |
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}else{ /* k1 Vn*Vm already exists */ |
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k11=existcomb[n][m]; |
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Tposprod[k]=k11; /* OK */ |
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Tvar[k]=Tvar[Tprod[k11]]; /* HERY */ |
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Tvardk[k][1]=m; |
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Tvardk[k][2]=n; |
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if( FixedV[Tvardk[k][1]] == 0 && FixedV[Tvardk[k][2]] == 0){ /* If the product is a fixed covariate then we feed the new column with Vn*Vm */ |
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/*cptcovage++;*/ /* Counts the number of covariates which include age as a product */ |
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cptcovprodage++; /* Counting the number of fixed covariate with age */ |
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/*Tage[cptcovage]=k;*/ /* For age*V3*V2 Tage[1]=V3*V3=9 HERY too*/ |
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Tvar[Tage[cptcovage]]=k1; |
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FixedV[ncovcolt+k12]=0; /* We expand Vn*Vm */ |
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k12++; |
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FixedV[ncovcolt+k12]=0; |
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}else{ /* Already exists but time varying (and age) */ |
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/*cptcovage++;*/ /* Counts the number of covariates which include age as a product */ |
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/*Tage[cptcovage]=k;*/ /* For age*V3*V2 Tage[1]=V3*V3=9 HERY too*/ |
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/* Tvar[Tage[cptcovage]]=k1; */ |
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cptcovprodvage++; |
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FixedV[ncovcolt+k12]=1; /* We expand Vn*Vm */ |
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k12++; |
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FixedV[ncovcolt+k12]=1; |
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} |
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} |
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/* Tage[cptcovage]=k; /\* V2+V1+V4+V3*age Tvar[4]=3, Tage[1] = 4 or V1+V1*age Tvar[2]=1, Tage[1]=2 *\/ */ |
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/* Tvar[k]=k11; /\* HERY *\/ */ |
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} else {/* simple product strb=age*Vn so that c=Vn and d=age, or strb=Vn*age so that c=age and d=Vn, or b=Vn*Vm so that c=Vm and d=Vn */ |
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cptcovprod++; |
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if (strcmp(strc,"age")==0) { /**< Model includes age: strb= Vn*age c=age d=Vn*/ |
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/* covar is not filled and then is empty */ |
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cutl(stre,strb,strd,'V'); /* strd=V3(input): stre="3" */ |
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Tvar[k]=atoi(stre); /* V2+V1+V5*age+V4+V3*age Tvar[5]=3 ; V1+V2*age Tvar[2]=2; V1+V1*age Tvar[2]=1 */ |
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Typevar[k]=1; /* 1 for age product */ |
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cptcovage++; /* Counts the number of covariates which include age as a product */ |
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Tage[cptcovage]=k; /* V2+V1+V4+V3*age Tvar[4]=3, Tage[1] = 4 or V1+V1*age Tvar[2]=1, Tage[1]=2 */ |
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if( FixedV[Tvar[k]] == 0){ |
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cptcovprodage++; /* Counting the number of fixed covariate with age */ |
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}else{ |
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cptcovprodvage++; /* Counting the number of fixedvarying covariate with age */ |
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} |
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/*printf("stre=%s ", stre);*/ |
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} else if (strcmp(strd,"age")==0) { /* strb= age*Vn c=Vn */ |
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cutl(stre,strb,strc,'V'); |
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Tvar[k]=atoi(stre); |
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Typevar[k]=1; /* 1 for age product */ |
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cptcovage++; |
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Tage[cptcovage]=k; |
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if( FixedV[Tvar[k]] == 0){ |
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cptcovprodage++; /* Counting the number of fixed covariate with age */ |
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}else{ |
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cptcovprodvage++; /* Counting the number of fixedvarying covariate with age */ |
} |
} |
} /*End of FixedV */ |
}else{ /* for product Vn*Vm */ |
} /* End age is not in the model */ |
Typevar[k]=2; /* 2 for product Vn*Vm */ |
} /* End if model includes a product */ |
cutl(stre,strb,strc,'V'); /* strc= Vn, stre is n; strb=V3*V2 stre=3 strc=*/ |
else { /* not a product */ |
n=atoi(stre); |
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cutl(strc,strb,strd,'V'); /* strd was Vm, strc is m */ |
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m=atoi(strc); |
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k1++; |
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cptcovprodnoage++; |
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if(existcomb[n][m] != 0 || existcomb[m][n] != 0){ |
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printf("Warning in model combination V%d*V%d already exists in the model in position k1=%d!\n",n,m,existcomb[n][m]); |
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fprintf(ficlog,"Warning in model combination V%d*V%d already exists in the model in position k1=%d!\n",n,m,existcomb[n][m]); |
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fflush(ficlog); |
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k11=existcomb[n][m]; |
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Tvar[k]=ncovcol+nqv+ntv+nqtv+k11; |
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Tposprod[k]=k11; |
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Tprod[k11]=k; |
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Tvardk[k][1] =m; /* m 1 for V1*/ |
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/* Tvard[k11][1] =m; /\* n 4 for V4*\/ */ |
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Tvardk[k][2] =n; /* n 4 for V4*/ |
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/* Tvard[k11][2] =n; /\* n 4 for V4*\/ */ |
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}else{ /* combination Vn*Vm doesn't exist we create it (no age)*/ |
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existcomb[n][m]=k1; |
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existcomb[m][n]=k1; |
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Tvar[k]=ncovcol+nqv+ntv+nqtv+k1; /* ncovcolt+k1; For model-covariate k tells which data-covariate to use but |
|
because this model-covariate is a construction we invent a new column |
|
which is after existing variables ncovcol+nqv+ntv+nqtv + k1 |
|
If already ncovcol=4 and model= V2 + V1 + V1*V4 + age*V3 + V3*V2 |
|
thus after V4 we invent V5 and V6 because age*V3 will be computed in 4 |
|
Tvar[3=V1*V4]=4+1=5 Tvar[5=V3*V2]=4 + 2= 6, Tvar[4=age*V3]=3 etc */ |
|
/* Please remark that the new variables are model dependent */ |
|
/* If we have 4 variable but the model uses only 3, like in |
|
* model= V1 + age*V1 + V2 + V3 + age*V2 + age*V3 + V1*V2 + V1*V3 |
|
* k= 1 2 3 4 5 6 7 8 |
|
* Tvar[k]=1 1 2 3 2 3 (5 6) (and not 4 5 because of V4 missing) |
|
* Tage[kk] [1]= 2 [2]=5 [3]=6 kk=1 to cptcovage=3 |
|
* Tvar[Tage[kk]][1]=2 [2]=2 [3]=3 |
|
*/ |
|
/* We need to feed some variables like TvarVV, but later on next loop because of ncovv (k2) is not correct */ |
|
Tprod[k1]=k; /* Tprod[1]=3(=V1*V4) for V2+V1+V1*V4+age*V3+V3*V2 +V6*V2*age */ |
|
Tposprod[k]=k1; /* Tposprod[3]=1, Tposprod[2]=5 */ |
|
Tvard[k1][1] =m; /* m 1 for V1*/ |
|
Tvardk[k][1] =m; /* m 1 for V1*/ |
|
Tvard[k1][2] =n; /* n 4 for V4*/ |
|
Tvardk[k][2] =n; /* n 4 for V4*/ |
|
k2=k2+2; /* k2 is initialize to -1, We want to store the n and m in Vn*Vm at the end of Tvar */ |
|
/* Tvar[cptcovt+k2]=Tvard[k1][1]; /\* Tvar[(cptcovt=4+k2=1)=5]= 1 (V1) *\/ */ |
|
/* Tvar[cptcovt+k2+1]=Tvard[k1][2]; /\* Tvar[(cptcovt=4+(k2=1)+1)=6]= 4 (V4) *\/ */ |
|
/*ncovcol=4 and model=V2+V1+V1*V4+age*V3+V3*V2, Tvar[3]=5, Tvar[4]=6, cptcovt=5 */ |
|
/* 1 2 3 4 5 | Tvar[5+1)=1, Tvar[7]=2 */ |
|
if( FixedV[Tvardk[k][1]] == 0 && FixedV[Tvardk[k][2]] == 0){ /* If the product is a fixed covariate then we feed the new column with Vn*Vm */ |
|
for (i=1; i<=lastobs;i++){/* For fixed product */ |
|
/* Computes the new covariate which is a product of |
|
covar[n][i]* covar[m][i] and stores it at ncovol+k1 May not be defined */ |
|
covar[ncovcolt+k1][i]=covar[atoi(stre)][i]*covar[atoi(strc)][i]; |
|
} |
|
/* TvarVV[k2]=n; */ |
|
/* FixedV[ncovcolt+k2]=0; /\* or FixedV[Tvar[k]]=0; FixedV[TvarVV[ncovv]]=0 HERE *\/ */ |
|
/* TvarVV[k2+1]=m; */ |
|
/* FixedV[ncovcolt+k2]=0; /\* or FixedV[Tvar[k]]=0; FixedV[TvarVV[ncovv]]=0 HERE *\/ */ |
|
}else{ /* not FixedV */ |
|
/* TvarVV[k2]=n; */ |
|
/* FixedV[ncovcolt+k2]=0; /\* or FixedV[Tvar[k]]=0; FixedV[TvarVV[ncovv]]=0 HERE *\/ */ |
|
/* TvarVV[k2+1]=m; */ |
|
/* FixedV[ncovcolt+k2]=0; /\* or FixedV[Tvar[k]]=0; FixedV[TvarVV[ncovv]]=0 HERE *\/ */ |
|
} |
|
} /* End of creation of Vn*Vm if not created by age*Vn*Vm earlier */ |
|
} /* End of product Vn*Vm */ |
|
} /* End of age*double product or simple product */ |
|
}else { /* not a product */ |
/*printf("d=%s c=%s b=%s\n", strd,strc,strb);*/ |
/*printf("d=%s c=%s b=%s\n", strd,strc,strb);*/ |
/* scanf("%d",i);*/ |
/* scanf("%d",i);*/ |
cutl(strd,strc,strb,'V'); |
cutl(strd,strc,strb,'V'); |
Line 11299 int decodemodel( char model[], int lasto
|
Line 11734 int decodemodel( char model[], int lasto
|
/*printf("a=%s b=%s sav=%s\n", stra,strb,modelsav); |
/*printf("a=%s b=%s sav=%s\n", stra,strb,modelsav); |
scanf("%d",i);*/ |
scanf("%d",i);*/ |
} /* end of loop + on total covariates */ |
} /* end of loop + on total covariates */ |
|
|
|
|
} /* end if strlen(modelsave == 0) age*age might exist */ |
} /* end if strlen(modelsave == 0) age*age might exist */ |
} /* end if strlen(model == 0) */ |
} /* end if strlen(model == 0) */ |
|
cptcovs=cptcovt - cptcovdageprod - cptcovprod;/**< Number of simple covariates V1 +V1*age +V3 +V3*V4 +age*age + age*v4*V3=> V1 + V3 =4+1-3=2 */ |
|
|
/*The number n of Vn is stored in Tvar. cptcovage =number of age covariate. Tage gives the position of age. cptcovprod= number of products. |
/*The number n of Vn is stored in Tvar. cptcovage =number of age covariate. Tage gives the position of age. cptcovprod= number of products. |
If model=V1+V1*age then Tvar[1]=1 Tvar[2]=1 cptcovage=1 Tage[1]=2 cptcovprod=0*/ |
If model=V1+V1*age then Tvar[1]=1 Tvar[2]=1 cptcovage=1 Tage[1]=2 cptcovprod=0*/ |
|
|
Line 11327 int decodemodel( char model[], int lasto
|
Line 11765 int decodemodel( char model[], int lasto
|
/* Tvar[k] is the value n of Vn with n varying for 1 to nvcol, or p Vp=Vn*Vm for product */ |
/* Tvar[k] is the value n of Vn with n varying for 1 to nvcol, or p Vp=Vn*Vm for product */ |
/* Computing effective variables, ie used by the model, that is from the cptcovt variables */ |
/* Computing effective variables, ie used by the model, that is from the cptcovt variables */ |
printf("Model=1+age+%s\n\ |
printf("Model=1+age+%s\n\ |
Typevar: 0 for simple covariate (dummy, quantitative, fixed or varying), 1 for age product, 2 for product \n\ |
Typevar: 0 for simple covariate (dummy, quantitative, fixed or varying), 1 for age product, 2 for product, 3 for double product with age \n\ |
Fixed[k] 0=fixed (product or simple), 1 varying, 2 fixed with age product, 3 varying with age product \n\ |
Fixed[k] 0=fixed (product or simple), 1 varying, 2 fixed with age product, 3 varying with age product \n\ |
Dummy[k] 0=dummy (0 1), 1 quantitative (single or product without age), 2 dummy with age product, 3 quant with age product\n",model); |
Dummy[k] 0=dummy (0 1), 1 quantitative (single or product without age), 2 dummy with age product, 3 quant with age product\n",model); |
fprintf(ficlog,"Model=1+age+%s\n\ |
fprintf(ficlog,"Model=1+age+%s\n\ |
Typevar: 0 for simple covariate (dummy, quantitative, fixed or varying), 1 for age product, 2 for product \n\ |
Typevar: 0 for simple covariate (dummy, quantitative, fixed or varying), 1 for age product, 2 for product, 3 for double product with age \n\ |
Fixed[k] 0=fixed (product or simple), 1 varying, 2 fixed with age product, 3 varying with age product \n\ |
Fixed[k] 0=fixed (product or simple), 1 varying, 2 fixed with age product, 3 varying with age product \n\ |
Dummy[k] 0=dummy (0 1), 1 quantitative (single or product without age), 2 dummy with age product, 3 quant with age product\n",model); |
Dummy[k] 0=dummy (0 1), 1 quantitative (single or product without age), 2 dummy with age product, 3 quant with age product\n",model); |
for(k=-1;k<=NCOVMAX; k++){ Fixed[k]=0; Dummy[k]=0;} |
for(k=-1;k<=NCOVMAX; k++){ Fixed[k]=0; Dummy[k]=0;} |
for(k=1;k<=NCOVMAX; k++){TvarFind[k]=0; TvarVind[k]=0;} |
for(k=1;k<=NCOVMAX; k++){TvarFind[k]=0; TvarVind[k]=0;} |
for(k=1, ncovf=0, nsd=0, nsq=0, ncovv=0, ncova=0, ncoveff=0, nqfveff=0, ntveff=0, nqtveff=0, ncovvt=0;k<=cptcovt; k++){ /* or cptocvt loop on k from model */ |
|
|
|
|
/* Second loop for calculating Fixed[k], Dummy[k]*/ |
|
|
|
|
|
for(k=1, ncovf=0, nsd=0, nsq=0, ncovv=0,ncovva=0,ncovvta=0, ncova=0, ncoveff=0, nqfveff=0, ntveff=0, nqtveff=0, ncovvt=0;k<=cptcovt; k++){ /* or cptocvt loop on k from model */ |
if (Tvar[k] <=ncovcol && Typevar[k]==0 ){ /* Simple fixed dummy (<=ncovcol) covariates */ |
if (Tvar[k] <=ncovcol && Typevar[k]==0 ){ /* Simple fixed dummy (<=ncovcol) covariates */ |
Fixed[k]= 0; |
Fixed[k]= 0; |
Dummy[k]= 0; |
Dummy[k]= 0; |
Line 11352 Dummy[k] 0=dummy (0 1), 1 quantitative (
|
Line 11795 Dummy[k] 0=dummy (0 1), 1 quantitative (
|
TvarFD[ncoveff]=Tvar[k]; /* TvarFD[1]=V1 in V5+V4+V3+V4*V3+V5*age+V2+V1*V2+V1*age+V1 */ |
TvarFD[ncoveff]=Tvar[k]; /* TvarFD[1]=V1 in V5+V4+V3+V4*V3+V5*age+V2+V1*V2+V1*age+V1 */ |
TvarFDind[ncoveff]=k; /* TvarFDind[1]=9 in V5+V4+V3+V4*V3+V5*age+V2+V1*V2+V1*age+V1 */ |
TvarFDind[ncoveff]=k; /* TvarFDind[1]=9 in V5+V4+V3+V4*V3+V5*age+V2+V1*V2+V1*age+V1 */ |
/* }else if( Tvar[k] <=ncovcol && Typevar[k]==2){ /\* Product of fixed dummy (<=ncovcol) covariates For a fixed product k is higher than ncovcol *\/ */ |
/* }else if( Tvar[k] <=ncovcol && Typevar[k]==2){ /\* Product of fixed dummy (<=ncovcol) covariates For a fixed product k is higher than ncovcol *\/ */ |
}else if( Tposprod[k]>0 && Typevar[k]==2 && FixedV[Tvardk[k][1]] == 0 && FixedV[Tvardk[k][2]] == 0){ /* Needs a fixed product Product of fixed dummy (<=ncovcol) covariates For a fixed product k is higher than ncovcol */ |
|
Fixed[k]= 0; |
|
Dummy[k]= 0; |
|
ncoveff++; |
|
ncovf++; |
|
modell[k].maintype= FTYPE; |
|
TvarF[ncovf]=Tvar[k]; |
|
/* TnsdVar[Tvar[k]]=nsd; */ /* To be done */ |
|
TvarFind[ncovf]=k; |
|
TvarFD[ncoveff]=Tvar[k]; /* TvarFD[1]=V1 in V5+V4+V3+V4*V3+V5*age+V2+V1*V2+V1*age+V1 */ |
|
TvarFDind[ncoveff]=k; /* TvarFDind[1]=9 in V5+V4+V3+V4*V3+V5*age+V2+V1*V2+V1*age+V1 */ |
|
}else if( Tvar[k] <=ncovcol+nqv && Typevar[k]==0){/* Remind that product Vn*Vm are added in k Only simple fixed quantitative variable */ |
}else if( Tvar[k] <=ncovcol+nqv && Typevar[k]==0){/* Remind that product Vn*Vm are added in k Only simple fixed quantitative variable */ |
Fixed[k]= 0; |
Fixed[k]= 0; |
Dummy[k]= 1; |
Dummy[k]= 1; |
Line 11424 Dummy[k] 0=dummy (0 1), 1 quantitative (
|
Line 11856 Dummy[k] 0=dummy (0 1), 1 quantitative (
|
TvarVQind[nqtveff]=k; /* TvarVQind[1]=1 in V5+V4+V3+V4*V3+V5*age+V2+V1*V2+V1*age+V1 */ /* Only simple time varying quantitative variable */ |
TvarVQind[nqtveff]=k; /* TvarVQind[1]=1 in V5+V4+V3+V4*V3+V5*age+V2+V1*V2+V1*age+V1 */ /* Only simple time varying quantitative variable */ |
TmodelInvQind[nqtveff]=Tvar[k]- ncovcol-nqv-ntv;/* Only simple time varying quantitative variable */ |
TmodelInvQind[nqtveff]=Tvar[k]- ncovcol-nqv-ntv;/* Only simple time varying quantitative variable */ |
/* Tmodeliqind[k]=nqtveff;/\* Only simple time varying quantitative variable *\/ */ |
/* Tmodeliqind[k]=nqtveff;/\* Only simple time varying quantitative variable *\/ */ |
/* printf("Quasi TmodelQind[%d]=%d,Tvar[TmodelQind[%d]]=V%d, ncovcol=%d, nqv=%d, ntv=%d,Tvar[k]- ncovcol-nqv-ntv=%d\n",nqtveff,k,nqtveff,Tvar[k], ncovcol, nqv, ntv, Tvar[k]- ncovcol-nqv-ntv); */ |
/* printf("Quasi TmodelQind[%d]=%d,Tvar[TmodelQind[%d]]=V%d, ncovcol=%d, nqv=%d, ntv=%Ad,Tvar[k]- ncovcol-nqv-ntv=%d\n",nqtveff,k,nqtveff,Tvar[k], ncovcol, nqv, ntv, Tvar[k]- ncovcol-nqv-ntv); */ |
/* printf("Quasi TmodelInvQind[%d]=%d\n",k,Tvar[k]- ncovcol-nqv-ntv); */ |
/* printf("Quasi TmodelInvQind[%d]=%d\n",k,Tvar[k]- ncovcol-nqv-ntv); */ |
}else if (Typevar[k] == 1) { /* product with age */ |
}else if (Typevar[k] == 1) { /* product with age */ |
ncova++; |
ncova++; |
TvarA[ncova]=Tvar[k]; |
TvarA[ncova]=Tvar[k]; |
TvarAind[ncova]=k; |
TvarAind[ncova]=k; |
|
/** Fixed[k] 0=fixed, 1 varying, 2 fixed with age product, 3 varying with age product */ |
|
/** Dummy[k] 0=dummy (0 1), 1 quantitative (single or product without age), 2 dummy with age product, 3 quant with age product */ |
if (Tvar[k] <=ncovcol ){ /* Product age with fixed dummy covariatee */ |
if (Tvar[k] <=ncovcol ){ /* Product age with fixed dummy covariatee */ |
Fixed[k]= 2; |
Fixed[k]= 2; |
Dummy[k]= 2; |
Dummy[k]= 2; |
modell[k].maintype= ATYPE; |
modell[k].maintype= ATYPE; |
modell[k].subtype= APFD; |
modell[k].subtype= APFD; |
|
ncovta++; |
|
TvarAVVA[ncovta]=Tvar[k]; /* (2)age*V3 */ |
|
TvarAVVAind[ncovta]=k; |
/* ncoveff++; */ |
/* ncoveff++; */ |
}else if( Tvar[k] <=ncovcol+nqv) { /* Remind that product Vn*Vm are added in k*/ |
}else if( Tvar[k] <=ncovcol+nqv) { /* Remind that product Vn*Vm are added in k*/ |
Fixed[k]= 2; |
Fixed[k]= 2; |
Dummy[k]= 3; |
Dummy[k]= 3; |
modell[k].maintype= ATYPE; |
modell[k].maintype= ATYPE; |
modell[k].subtype= APFQ; /* Product age * fixed quantitative */ |
modell[k].subtype= APFQ; /* Product age * fixed quantitative */ |
|
ncovta++; |
|
TvarAVVA[ncovta]=Tvar[k]; /* */ |
|
TvarAVVAind[ncovta]=k; |
/* nqfveff++; /\* Only simple fixed quantitative variable *\/ */ |
/* nqfveff++; /\* Only simple fixed quantitative variable *\/ */ |
}else if( Tvar[k] <=ncovcol+nqv+ntv ){ |
}else if( Tvar[k] <=ncovcol+nqv+ntv ){ |
Fixed[k]= 3; |
Fixed[k]= 3; |
Dummy[k]= 2; |
Dummy[k]= 2; |
modell[k].maintype= ATYPE; |
modell[k].maintype= ATYPE; |
modell[k].subtype= APVD; /* Product age * varying dummy */ |
modell[k].subtype= APVD; /* Product age * varying dummy */ |
|
ncovva++; |
|
TvarVVA[ncovva]=Tvar[k]; /* (1)+age*V6 + (2)age*V7 */ |
|
TvarVVAind[ncovva]=k; |
|
ncovta++; |
|
TvarAVVA[ncovta]=Tvar[k]; /* */ |
|
TvarAVVAind[ncovta]=k; |
/* ntveff++; /\* Only simple time varying dummy variable *\/ */ |
/* ntveff++; /\* Only simple time varying dummy variable *\/ */ |
}else if( Tvar[k] <=ncovcol+nqv+ntv+nqtv){ |
}else if( Tvar[k] <=ncovcol+nqv+ntv+nqtv){ |
Fixed[k]= 3; |
Fixed[k]= 3; |
Dummy[k]= 3; |
Dummy[k]= 3; |
modell[k].maintype= ATYPE; |
modell[k].maintype= ATYPE; |
modell[k].subtype= APVQ; /* Product age * varying quantitative */ |
modell[k].subtype= APVQ; /* Product age * varying quantitative */ |
|
ncovva++; |
|
TvarVVA[ncovva]=Tvar[k]; /* */ |
|
TvarVVAind[ncovva]=k; |
|
ncovta++; |
|
TvarAVVA[ncovta]=Tvar[k]; /* (1)+age*V6 + (2)age*V7 */ |
|
TvarAVVAind[ncovta]=k; |
/* nqtveff++;/\* Only simple time varying quantitative variable *\/ */ |
/* nqtveff++;/\* Only simple time varying quantitative variable *\/ */ |
} |
} |
}else if (Typevar[k] == 2) { /* product Vn * Vm without age, V1+V3+age*V1+age*V3+V1*V3 looking at V1*V3, Typevar={0, 0, 1, 1, 2}, k=5, V1 is fixed, V3 is timevary, V5 is a product */ |
}else if( Tposprod[k]>0 && Typevar[k]==2){ /* Detects if fixed product no age Vm*Vn */ |
|
printf("MEMORY ERRORR k=%d Tposprod[k]=%d, Typevar[k]=%d\n ",k, Tposprod[k], Typevar[k]); |
|
if(FixedV[Tvardk[k][1]] == 0 && FixedV[Tvardk[k][2]] == 0){ /* Needs a fixed product Product of fixed dummy (<=ncovcol) covariates For a fixed product k is higher than ncovcol V3*V2 */ |
|
printf("MEMORY ERRORR k=%d Tvardk[k][1]=%d, Tvardk[k][2]=%d, FixedV[Tvardk[k][1]]=%d,FixedV[Tvardk[k][2]]=%d\n ",k,Tvardk[k][1],Tvardk[k][2],FixedV[Tvardk[k][1]],FixedV[Tvardk[k][2]]); |
|
Fixed[k]= 0; |
|
Dummy[k]= 0; |
|
ncoveff++; |
|
ncovf++; |
|
/* ncovv++; */ |
|
/* TvarVV[ncovv]=Tvardk[k][1]; */ |
|
/* FixedV[ncovcolt+ncovv]=0; /\* or FixedV[TvarVV[ncovv]]=0 HERE *\/ */ |
|
/* ncovv++; */ |
|
/* TvarVV[ncovv]=Tvardk[k][2]; */ |
|
/* FixedV[ncovcolt+ncovv]=0; /\* or FixedV[TvarVV[ncovv]]=0 HERE *\/ */ |
|
modell[k].maintype= FTYPE; |
|
TvarF[ncovf]=Tvar[k]; |
|
/* TnsdVar[Tvar[k]]=nsd; */ /* To be done */ |
|
TvarFind[ncovf]=k; |
|
TvarFD[ncoveff]=Tvar[k]; /* TvarFD[1]=V1 in V5+V4+V3+V4*V3+V5*age+V2+V1*V2+V1*age+V1 */ |
|
TvarFDind[ncoveff]=k; /* TvarFDind[1]=9 in V5+V4+V3+V4*V3+V5*age+V2+V1*V2+V1*age+V1 */ |
|
}else{/* product varying Vn * Vm without age, V1+V3+age*V1+age*V3+V1*V3 looking at V1*V3, Typevar={0, 0, 1, 1, 2}, k=5, V1 is fixed, V3 is timevary, V5 is a product */ |
|
/*# ID V1 V2 weight birth death 1st s1 V3 V4 V5 2nd s2 */ |
|
/* model V1+V3+age*V1+age*V3+V1*V3 + V1*V3*age*/ |
|
/* Tvar={1, 3, 1, 3, 6, 6}, the 6 comes from the fact that there are already V1, V2, V3, V4, V5 native covariates */ |
|
k1=Tposprod[k]; /* Position in the products of product k, Tposprod={0, 0, 0, 0, 1, 1} k1=1 first product but second time varying because of V3 */ |
|
ncovvt++; |
|
TvarVV[ncovvt]=Tvard[k1][1]; /* TvarVV[2]=V1 (because TvarVV[1] was V3, first time varying covariates */ |
|
TvarVVind[ncovvt]=k; /* TvarVVind[2]=5 (because TvarVVind[2] was V1*V3 at position 5 */ |
|
ncovvt++; |
|
TvarVV[ncovvt]=Tvard[k1][2]; /* TvarVV[3]=V3 */ |
|
TvarVVind[ncovvt]=k; /* TvarVVind[2]=5 (because TvarVVind[2] was V1*V3 at position 5 */ |
|
|
|
/** Fixed[k] 0=fixed, 1 varying, 2 fixed with age product, 3 varying with age product */ |
|
/** Dummy[k] 0=dummy (0 1), 1 quantitative (single or product without age), 2 dummy with age product, 3 quant with age product */ |
|
|
|
if(Tvard[k1][1] <=ncovcol){ /* Vn is dummy fixed, (Tvard[1][1]=V1), (Tvard[1][1]=V3 time varying) */ |
|
if(Tvard[k1][2] <=ncovcol){ /* Vm is dummy fixed */ |
|
Fixed[k]= 1; |
|
Dummy[k]= 0; |
|
modell[k].maintype= FTYPE; |
|
modell[k].subtype= FPDD; /* Product fixed dummy * fixed dummy */ |
|
ncovf++; /* Fixed variables without age */ |
|
TvarF[ncovf]=Tvar[k]; |
|
TvarFind[ncovf]=k; |
|
}else if(Tvard[k1][2] <=ncovcol+nqv){ /* Vm is quanti fixed */ |
|
Fixed[k]= 0; /* Fixed product */ |
|
Dummy[k]= 1; |
|
modell[k].maintype= FTYPE; |
|
modell[k].subtype= FPDQ; /* Product fixed dummy * fixed quantitative */ |
|
ncovf++; /* Varying variables without age */ |
|
TvarF[ncovf]=Tvar[k]; |
|
TvarFind[ncovf]=k; |
|
}else if(Tvard[k1][2] <=ncovcol+nqv+ntv){ /* Vm is a time varying dummy covariate */ |
|
Fixed[k]= 1; |
|
Dummy[k]= 0; |
|
modell[k].maintype= VTYPE; |
|
modell[k].subtype= VPDD; /* Product fixed dummy * varying dummy */ |
|
ncovv++; /* Varying variables without age */ |
|
TvarV[ncovv]=Tvar[k]; /* TvarV[1]=Tvar[5]=5 because there is a V4 */ |
|
TvarVind[ncovv]=k;/* TvarVind[1]=5 */ |
|
}else if(Tvard[k1][2] <=ncovcol+nqv+ntv+nqtv){ /* Vm is a time varying quantitative covariate */ |
|
Fixed[k]= 1; |
|
Dummy[k]= 1; |
|
modell[k].maintype= VTYPE; |
|
modell[k].subtype= VPDQ; /* Product fixed dummy * varying quantitative */ |
|
ncovv++; /* Varying variables without age */ |
|
TvarV[ncovv]=Tvar[k]; |
|
TvarVind[ncovv]=k; |
|
} |
|
}else if(Tvard[k1][1] <=ncovcol+nqv){ /* Vn is fixed quanti */ |
|
if(Tvard[k1][2] <=ncovcol){ /* Vm is fixed dummy */ |
|
Fixed[k]= 0; /* Fixed product */ |
|
Dummy[k]= 1; |
|
modell[k].maintype= FTYPE; |
|
modell[k].subtype= FPDQ; /* Product fixed quantitative * fixed dummy */ |
|
ncovf++; /* Fixed variables without age */ |
|
TvarF[ncovf]=Tvar[k]; |
|
TvarFind[ncovf]=k; |
|
}else if(Tvard[k1][2] <=ncovcol+nqv+ntv){ /* Vm is time varying */ |
|
Fixed[k]= 1; |
|
Dummy[k]= 1; |
|
modell[k].maintype= VTYPE; |
|
modell[k].subtype= VPDQ; /* Product fixed quantitative * varying dummy */ |
|
ncovv++; /* Varying variables without age */ |
|
TvarV[ncovv]=Tvar[k]; |
|
TvarVind[ncovv]=k; |
|
}else if(Tvard[k1][2] <=ncovcol+nqv+ntv+nqtv){ /* Vm is time varying quanti */ |
|
Fixed[k]= 1; |
|
Dummy[k]= 1; |
|
modell[k].maintype= VTYPE; |
|
modell[k].subtype= VPQQ; /* Product fixed quantitative * varying quantitative */ |
|
ncovv++; /* Varying variables without age */ |
|
TvarV[ncovv]=Tvar[k]; |
|
TvarVind[ncovv]=k; |
|
ncovv++; /* Varying variables without age */ |
|
TvarV[ncovv]=Tvar[k]; |
|
TvarVind[ncovv]=k; |
|
} |
|
}else if(Tvard[k1][1] <=ncovcol+nqv+ntv){ /* Vn is time varying dummy */ |
|
if(Tvard[k1][2] <=ncovcol){ |
|
Fixed[k]= 1; |
|
Dummy[k]= 1; |
|
modell[k].maintype= VTYPE; |
|
modell[k].subtype= VPDD; /* Product time varying dummy * fixed dummy */ |
|
ncovv++; /* Varying variables without age */ |
|
TvarV[ncovv]=Tvar[k]; |
|
TvarVind[ncovv]=k; |
|
}else if(Tvard[k1][2] <=ncovcol+nqv){ |
|
Fixed[k]= 1; |
|
Dummy[k]= 1; |
|
modell[k].maintype= VTYPE; |
|
modell[k].subtype= VPDQ; /* Product time varying dummy * fixed quantitative */ |
|
ncovv++; /* Varying variables without age */ |
|
TvarV[ncovv]=Tvar[k]; |
|
TvarVind[ncovv]=k; |
|
}else if(Tvard[k1][2] <=ncovcol+nqv+ntv){ |
|
Fixed[k]= 1; |
|
Dummy[k]= 0; |
|
modell[k].maintype= VTYPE; |
|
modell[k].subtype= VPDD; /* Product time varying dummy * time varying dummy */ |
|
ncovv++; /* Varying variables without age */ |
|
TvarV[ncovv]=Tvar[k]; |
|
TvarVind[ncovv]=k; |
|
}else if(Tvard[k1][2] <=ncovcol+nqv+ntv+nqtv){ |
|
Fixed[k]= 1; |
|
Dummy[k]= 1; |
|
modell[k].maintype= VTYPE; |
|
modell[k].subtype= VPDQ; /* Product time varying dummy * time varying quantitative */ |
|
ncovv++; /* Varying variables without age */ |
|
TvarV[ncovv]=Tvar[k]; |
|
TvarVind[ncovv]=k; |
|
} |
|
}else if(Tvard[k1][1] <=ncovcol+nqv+ntv+nqtv){ /* Vn is time varying quanti */ |
|
if(Tvard[k1][2] <=ncovcol){ |
|
Fixed[k]= 1; |
|
Dummy[k]= 1; |
|
modell[k].maintype= VTYPE; |
|
modell[k].subtype= VPDQ; /* Product time varying quantitative * fixed dummy */ |
|
ncovv++; /* Varying variables without age */ |
|
TvarV[ncovv]=Tvar[k]; |
|
TvarVind[ncovv]=k; |
|
}else if(Tvard[k1][2] <=ncovcol+nqv){ |
|
Fixed[k]= 1; |
|
Dummy[k]= 1; |
|
modell[k].maintype= VTYPE; |
|
modell[k].subtype= VPQQ; /* Product time varying quantitative * fixed quantitative */ |
|
ncovv++; /* Varying variables without age */ |
|
TvarV[ncovv]=Tvar[k]; |
|
TvarVind[ncovv]=k; |
|
}else if(Tvard[k1][2] <=ncovcol+nqv+ntv){ |
|
Fixed[k]= 1; |
|
Dummy[k]= 1; |
|
modell[k].maintype= VTYPE; |
|
modell[k].subtype= VPDQ; /* Product time varying quantitative * time varying dummy */ |
|
ncovv++; /* Varying variables without age */ |
|
TvarV[ncovv]=Tvar[k]; |
|
TvarVind[ncovv]=k; |
|
}else if(Tvard[k1][2] <=ncovcol+nqv+ntv+nqtv){ |
|
Fixed[k]= 1; |
|
Dummy[k]= 1; |
|
modell[k].maintype= VTYPE; |
|
modell[k].subtype= VPQQ; /* Product time varying quantitative * time varying quantitative */ |
|
ncovv++; /* Varying variables without age */ |
|
TvarV[ncovv]=Tvar[k]; |
|
TvarVind[ncovv]=k; |
|
} |
|
}else{ |
|
printf("Error unknown type of covariate: Tvard[%d][1]=%d,Tvard[%d][2]=%d\n",k1,Tvard[k1][1],k1,Tvard[k1][2]); |
|
fprintf(ficlog,"Error unknown type of covariate: Tvard[%d][1]=%d,Tvard[%d][2]=%d\n",k1,Tvard[k1][1],k1,Tvard[k1][2]); |
|
} /*end k1*/ |
|
} |
|
}else if(Typevar[k] == 3){ /* product Vn * Vm with age, V1+V3+age*V1+age*V3+V1*V3 looking at V1*V3, Typevar={0, 0, 1, 1, 2}, k=5, V1 is fixed, V3 is timevary, V5 is a product */ |
/*# ID V1 V2 weight birth death 1st s1 V3 V4 V5 2nd s2 */ |
/*# ID V1 V2 weight birth death 1st s1 V3 V4 V5 2nd s2 */ |
/* model V1+V3+age*V1+age*V3+V1*V3 */ |
/* model V1+V3+age*V1+age*V3+V1*V3 + V1*V3*age*/ |
/* Tvar={1, 3, 1, 3, 6}, the 6 comes from the fact that there are already V1, V2, V3, V4, V5 native covariates */ |
/* Tvar={1, 3, 1, 3, 6, 6}, the 6 comes from the fact that there are already V1, V2, V3, V4, V5 native covariates */ |
k1=Tposprod[k]; /* Position in the products of product k, Tposprod={0, 0, 0, 0, 1} k1=1 first product but second time varying because of V3 */ |
k1=Tposprod[k]; /* Position in the products of product k, Tposprod={0, 0, 0, 0, 1, 1} k1=1 first product but second time varying because of V3 */ |
ncovvt++; |
ncova++; |
TvarVV[ncovvt]=Tvard[k1][1]; /* TvarVV[2]=V1 (because TvarVV[1] was V3, first time varying covariates */ |
TvarA[ncova]=Tvard[k1][1]; /* TvarVV[2]=V1 (because TvarVV[1] was V3, first time varying covariates */ |
TvarVVind[ncovvt]=k; /* TvarVVind[2]=5 (because TvarVVind[2] was V1*V3 at position 5 */ |
TvarAind[ncova]=k; /* TvarVVind[2]=5 (because TvarVVind[2] was V1*V3 at position 5 */ |
ncovvt++; |
ncova++; |
TvarVV[ncovvt]=Tvard[k1][2]; /* TvarVV[3]=V3 */ |
TvarA[ncova]=Tvard[k1][2]; /* TvarVV[3]=V3 */ |
TvarVVind[ncovvt]=k; /* TvarVVind[2]=5 (because TvarVVind[2] was V1*V3 at position 5 */ |
TvarAind[ncova]=k; /* TvarVVind[2]=5 (because TvarVVind[2] was V1*V3 at position 5 */ |
|
|
|
|
|
/** Fixed[k] 0=fixed, 1 varying, 2 fixed with age product, 3 varying with age product */ |
|
/** Dummy[k] 0=dummy (0 1), 1 quantitative (single or product without age), 2 dummy with age product, 3 quant with age product */ |
|
if( FixedV[Tvardk[k][1]] == 0 && FixedV[Tvardk[k][2]] == 0){ |
|
ncovta++; |
|
TvarAVVA[ncovta]=Tvard[k1][1]; /* age*V6*V3 +age*V7*V3 + age*V6*V4 +age*V7*V4 */ |
|
TvarAVVAind[ncovta]=k; |
|
ncovta++; |
|
TvarAVVA[ncovta]=Tvard[k1][2]; /* age*V6*V3 +age*V7*V3 + age*V6*V4 +age*V7*V4 */ |
|
TvarAVVAind[ncovta]=k; |
|
}else{ |
|
ncovva++; /* HERY reached */ |
|
TvarVVA[ncovva]=Tvard[k1][1]; /* age*V6*V3 +age*V7*V3 + age*V6*V4 +age*V7*V4 */ |
|
TvarVVAind[ncovva]=k; |
|
ncovva++; |
|
TvarVVA[ncovva]=Tvard[k1][2]; /* */ |
|
TvarVVAind[ncovva]=k; |
|
ncovta++; |
|
TvarAVVA[ncovta]=Tvard[k1][1]; /* age*V6*V3 +age*V7*V3 + age*V6*V4 +age*V7*V4 */ |
|
TvarAVVAind[ncovta]=k; |
|
ncovta++; |
|
TvarAVVA[ncovta]=Tvard[k1][2]; /* age*V6*V3 +age*V7*V3 + age*V6*V4 +age*V7*V4 */ |
|
TvarAVVAind[ncovta]=k; |
|
} |
if(Tvard[k1][1] <=ncovcol){ /* Vn is dummy fixed, (Tvard[1][1]=V1), (Tvard[1][1]=V3 time varying) */ |
if(Tvard[k1][1] <=ncovcol){ /* Vn is dummy fixed, (Tvard[1][1]=V1), (Tvard[1][1]=V3 time varying) */ |
if(Tvard[k1][2] <=ncovcol){ /* Vm is dummy fixed */ |
if(Tvard[k1][2] <=ncovcol){ /* Vm is dummy fixed */ |
Fixed[k]= 1; |
Fixed[k]= 2; |
Dummy[k]= 0; |
Dummy[k]= 2; |
modell[k].maintype= FTYPE; |
modell[k].maintype= FTYPE; |
modell[k].subtype= FPDD; /* Product fixed dummy * fixed dummy */ |
modell[k].subtype= FPDD; /* Product fixed dummy * fixed dummy */ |
ncovf++; /* Fixed variables without age */ |
/* TvarF[ncova]=Tvar[k]; /\* Problem to solve *\/ */ |
TvarF[ncovf]=Tvar[k]; |
/* TvarFind[ncova]=k; */ |
TvarFind[ncovf]=k; |
|
}else if(Tvard[k1][2] <=ncovcol+nqv){ /* Vm is quanti fixed */ |
}else if(Tvard[k1][2] <=ncovcol+nqv){ /* Vm is quanti fixed */ |
Fixed[k]= 0; /* Fixed product */ |
Fixed[k]= 2; /* Fixed product */ |
Dummy[k]= 1; |
Dummy[k]= 3; |
modell[k].maintype= FTYPE; |
modell[k].maintype= FTYPE; |
modell[k].subtype= FPDQ; /* Product fixed dummy * fixed quantitative */ |
modell[k].subtype= FPDQ; /* Product fixed dummy * fixed quantitative */ |
ncovf++; /* Varying variables without age */ |
/* TvarF[ncova]=Tvar[k]; */ |
TvarF[ncovf]=Tvar[k]; |
/* TvarFind[ncova]=k; */ |
TvarFind[ncovf]=k; |
|
}else if(Tvard[k1][2] <=ncovcol+nqv+ntv){ /* Vm is a time varying dummy covariate */ |
}else if(Tvard[k1][2] <=ncovcol+nqv+ntv){ /* Vm is a time varying dummy covariate */ |
Fixed[k]= 1; |
Fixed[k]= 3; |
Dummy[k]= 0; |
Dummy[k]= 2; |
modell[k].maintype= VTYPE; |
modell[k].maintype= VTYPE; |
modell[k].subtype= VPDD; /* Product fixed dummy * varying dummy */ |
modell[k].subtype= VPDD; /* Product fixed dummy * varying dummy */ |
ncovv++; /* Varying variables without age */ |
TvarV[ncova]=Tvar[k]; /* TvarV[1]=Tvar[5]=5 because there is a V4 */ |
TvarV[ncovv]=Tvar[k]; /* TvarV[1]=Tvar[5]=5 because there is a V4 */ |
TvarVind[ncova]=k;/* TvarVind[1]=5 */ |
TvarVind[ncovv]=k;/* TvarVind[1]=5 */ |
|
}else if(Tvard[k1][2] <=ncovcol+nqv+ntv+nqtv){ /* Vm is a time varying quantitative covariate */ |
}else if(Tvard[k1][2] <=ncovcol+nqv+ntv+nqtv){ /* Vm is a time varying quantitative covariate */ |
Fixed[k]= 1; |
Fixed[k]= 3; |
Dummy[k]= 1; |
Dummy[k]= 3; |
modell[k].maintype= VTYPE; |
modell[k].maintype= VTYPE; |
modell[k].subtype= VPDQ; /* Product fixed dummy * varying quantitative */ |
modell[k].subtype= VPDQ; /* Product fixed dummy * varying quantitative */ |
ncovv++; /* Varying variables without age */ |
/* ncovv++; /\* Varying variables without age *\/ */ |
TvarV[ncovv]=Tvar[k]; |
/* TvarV[ncovv]=Tvar[k]; */ |
TvarVind[ncovv]=k; |
/* TvarVind[ncovv]=k; */ |
} |
} |
}else if(Tvard[k1][1] <=ncovcol+nqv){ /* Vn is fixed quanti */ |
}else if(Tvard[k1][1] <=ncovcol+nqv){ /* Vn is fixed quanti */ |
if(Tvard[k1][2] <=ncovcol){ /* Vm is fixed dummy */ |
if(Tvard[k1][2] <=ncovcol){ /* Vm is fixed dummy */ |
Fixed[k]= 0; /* Fixed product */ |
Fixed[k]= 2; /* Fixed product */ |
Dummy[k]= 1; |
Dummy[k]= 2; |
modell[k].maintype= FTYPE; |
modell[k].maintype= FTYPE; |
modell[k].subtype= FPDQ; /* Product fixed quantitative * fixed dummy */ |
modell[k].subtype= FPDQ; /* Product fixed quantitative * fixed dummy */ |
ncovf++; /* Fixed variables without age */ |
/* ncova++; /\* Fixed variables with age *\/ */ |
TvarF[ncovf]=Tvar[k]; |
/* TvarF[ncovf]=Tvar[k]; */ |
TvarFind[ncovf]=k; |
/* TvarFind[ncovf]=k; */ |
}else if(Tvard[k1][2] <=ncovcol+nqv+ntv){ /* Vm is time varying */ |
}else if(Tvard[k1][2] <=ncovcol+nqv+ntv){ /* Vm is time varying */ |
Fixed[k]= 1; |
Fixed[k]= 2; |
Dummy[k]= 1; |
Dummy[k]= 3; |
modell[k].maintype= VTYPE; |
modell[k].maintype= VTYPE; |
modell[k].subtype= VPDQ; /* Product fixed quantitative * varying dummy */ |
modell[k].subtype= VPDQ; /* Product fixed quantitative * varying dummy */ |
ncovv++; /* Varying variables without age */ |
/* ncova++; /\* Varying variables with age *\/ */ |
TvarV[ncovv]=Tvar[k]; |
/* TvarV[ncova]=Tvar[k]; */ |
TvarVind[ncovv]=k; |
/* TvarVind[ncova]=k; */ |
}else if(Tvard[k1][2] <=ncovcol+nqv+ntv+nqtv){ /* Vm is time varying quanti */ |
}else if(Tvard[k1][2] <=ncovcol+nqv+ntv+nqtv){ /* Vm is time varying quanti */ |
Fixed[k]= 1; |
Fixed[k]= 3; |
Dummy[k]= 1; |
Dummy[k]= 2; |
modell[k].maintype= VTYPE; |
modell[k].maintype= VTYPE; |
modell[k].subtype= VPQQ; /* Product fixed quantitative * varying quantitative */ |
modell[k].subtype= VPQQ; /* Product fixed quantitative * varying quantitative */ |
ncovv++; /* Varying variables without age */ |
ncova++; /* Varying variables without age */ |
TvarV[ncovv]=Tvar[k]; |
TvarV[ncova]=Tvar[k]; |
TvarVind[ncovv]=k; |
TvarVind[ncova]=k; |
ncovv++; /* Varying variables without age */ |
/* ncova++; /\* Varying variables without age *\/ */ |
TvarV[ncovv]=Tvar[k]; |
/* TvarV[ncova]=Tvar[k]; */ |
TvarVind[ncovv]=k; |
/* TvarVind[ncova]=k; */ |
} |
} |
}else if(Tvard[k1][1] <=ncovcol+nqv+ntv){ /* Vn is time varying dummy */ |
}else if(Tvard[k1][1] <=ncovcol+nqv+ntv){ /* Vn is time varying dummy */ |
if(Tvard[k1][2] <=ncovcol){ |
if(Tvard[k1][2] <=ncovcol){ |
Fixed[k]= 1; |
Fixed[k]= 2; |
Dummy[k]= 1; |
Dummy[k]= 2; |
modell[k].maintype= VTYPE; |
modell[k].maintype= VTYPE; |
modell[k].subtype= VPDD; /* Product time varying dummy * fixed dummy */ |
modell[k].subtype= VPDD; /* Product time varying dummy * fixed dummy */ |
ncovv++; /* Varying variables without age */ |
/* ncova++; /\* Varying variables with age *\/ */ |
TvarV[ncovv]=Tvar[k]; |
/* TvarV[ncova]=Tvar[k]; */ |
TvarVind[ncovv]=k; |
/* TvarVind[ncova]=k; */ |
}else if(Tvard[k1][2] <=ncovcol+nqv){ |
}else if(Tvard[k1][2] <=ncovcol+nqv){ |
Fixed[k]= 1; |
Fixed[k]= 2; |
Dummy[k]= 1; |
Dummy[k]= 3; |
modell[k].maintype= VTYPE; |
modell[k].maintype= VTYPE; |
modell[k].subtype= VPDQ; /* Product time varying dummy * fixed quantitative */ |
modell[k].subtype= VPDQ; /* Product time varying dummy * fixed quantitative */ |
ncovv++; /* Varying variables without age */ |
/* ncova++; /\* Varying variables with age *\/ */ |
TvarV[ncovv]=Tvar[k]; |
/* TvarV[ncova]=Tvar[k]; */ |
TvarVind[ncovv]=k; |
/* TvarVind[ncova]=k; */ |
}else if(Tvard[k1][2] <=ncovcol+nqv+ntv){ |
}else if(Tvard[k1][2] <=ncovcol+nqv+ntv){ |
Fixed[k]= 1; |
Fixed[k]= 3; |
Dummy[k]= 0; |
Dummy[k]= 2; |
modell[k].maintype= VTYPE; |
modell[k].maintype= VTYPE; |
modell[k].subtype= VPDD; /* Product time varying dummy * time varying dummy */ |
modell[k].subtype= VPDD; /* Product time varying dummy * time varying dummy */ |
ncovv++; /* Varying variables without age */ |
/* ncova++; /\* Varying variables with age *\/ */ |
TvarV[ncovv]=Tvar[k]; |
/* TvarV[ncova]=Tvar[k]; */ |
TvarVind[ncovv]=k; |
/* TvarVind[ncova]=k; */ |
}else if(Tvard[k1][2] <=ncovcol+nqv+ntv+nqtv){ |
}else if(Tvard[k1][2] <=ncovcol+nqv+ntv+nqtv){ |
Fixed[k]= 1; |
Fixed[k]= 3; |
Dummy[k]= 1; |
Dummy[k]= 3; |
modell[k].maintype= VTYPE; |
modell[k].maintype= VTYPE; |
modell[k].subtype= VPDQ; /* Product time varying dummy * time varying quantitative */ |
modell[k].subtype= VPDQ; /* Product time varying dummy * time varying quantitative */ |
ncovv++; /* Varying variables without age */ |
/* ncova++; /\* Varying variables with age *\/ */ |
TvarV[ncovv]=Tvar[k]; |
/* TvarV[ncova]=Tvar[k]; */ |
TvarVind[ncovv]=k; |
/* TvarVind[ncova]=k; */ |
} |
} |
}else if(Tvard[k1][1] <=ncovcol+nqv+ntv+nqtv){ /* Vn is time varying quanti */ |
}else if(Tvard[k1][1] <=ncovcol+nqv+ntv+nqtv){ /* Vn is time varying quanti */ |
if(Tvard[k1][2] <=ncovcol){ |
if(Tvard[k1][2] <=ncovcol){ |
Fixed[k]= 1; |
Fixed[k]= 2; |
Dummy[k]= 1; |
Dummy[k]= 2; |
modell[k].maintype= VTYPE; |
modell[k].maintype= VTYPE; |
modell[k].subtype= VPDQ; /* Product time varying quantitative * fixed dummy */ |
modell[k].subtype= VPDQ; /* Product time varying quantitative * fixed dummy */ |
ncovv++; /* Varying variables without age */ |
/* ncova++; /\* Varying variables with age *\/ */ |
TvarV[ncovv]=Tvar[k]; |
/* TvarV[ncova]=Tvar[k]; */ |
TvarVind[ncovv]=k; |
/* TvarVind[ncova]=k; */ |
}else if(Tvard[k1][2] <=ncovcol+nqv){ |
}else if(Tvard[k1][2] <=ncovcol+nqv){ |
Fixed[k]= 1; |
Fixed[k]= 2; |
Dummy[k]= 1; |
Dummy[k]= 3; |
modell[k].maintype= VTYPE; |
modell[k].maintype= VTYPE; |
modell[k].subtype= VPQQ; /* Product time varying quantitative * fixed quantitative */ |
modell[k].subtype= VPQQ; /* Product time varying quantitative * fixed quantitative */ |
ncovv++; /* Varying variables without age */ |
/* ncova++; /\* Varying variables with age *\/ */ |
TvarV[ncovv]=Tvar[k]; |
/* TvarV[ncova]=Tvar[k]; */ |
TvarVind[ncovv]=k; |
/* TvarVind[ncova]=k; */ |
}else if(Tvard[k1][2] <=ncovcol+nqv+ntv){ |
}else if(Tvard[k1][2] <=ncovcol+nqv+ntv){ |
Fixed[k]= 1; |
Fixed[k]= 3; |
Dummy[k]= 1; |
Dummy[k]= 2; |
modell[k].maintype= VTYPE; |
modell[k].maintype= VTYPE; |
modell[k].subtype= VPDQ; /* Product time varying quantitative * time varying dummy */ |
modell[k].subtype= VPDQ; /* Product time varying quantitative * time varying dummy */ |
ncovv++; /* Varying variables without age */ |
/* ncova++; /\* Varying variables with age *\/ */ |
TvarV[ncovv]=Tvar[k]; |
/* TvarV[ncova]=Tvar[k]; */ |
TvarVind[ncovv]=k; |
/* TvarVind[ncova]=k; */ |
}else if(Tvard[k1][2] <=ncovcol+nqv+ntv+nqtv){ |
}else if(Tvard[k1][2] <=ncovcol+nqv+ntv+nqtv){ |
Fixed[k]= 1; |
Fixed[k]= 3; |
Dummy[k]= 1; |
Dummy[k]= 3; |
modell[k].maintype= VTYPE; |
modell[k].maintype= VTYPE; |
modell[k].subtype= VPQQ; /* Product time varying quantitative * time varying quantitative */ |
modell[k].subtype= VPQQ; /* Product time varying quantitative * time varying quantitative */ |
ncovv++; /* Varying variables without age */ |
/* ncova++; /\* Varying variables with age *\/ */ |
TvarV[ncovv]=Tvar[k]; |
/* TvarV[ncova]=Tvar[k]; */ |
TvarVind[ncovv]=k; |
/* TvarVind[ncova]=k; */ |
} |
} |
}else{ |
}else{ |
printf("Error unknown type of covariate: Tvard[%d][1]=%d,Tvard[%d][2]=%d\n",k1,Tvard[k1][1],k1,Tvard[k1][2]); |
printf("Error unknown type of covariate: Tvard[%d][1]=%d,Tvard[%d][2]=%d\n",k1,Tvard[k1][1],k1,Tvard[k1][2]); |
fprintf(ficlog,"Error unknown type of covariate: Tvard[%d][1]=%d,Tvard[%d][2]=%d\n",k1,Tvard[k1][1],k1,Tvard[k1][2]); |
fprintf(ficlog,"Error unknown type of covariate: Tvard[%d][1]=%d,Tvard[%d][2]=%d\n",k1,Tvard[k1][1],k1,Tvard[k1][2]); |
} /*end k1*/ |
} /*end k1*/ |
}else{ |
} else{ |
printf("Error, current version can't treat for performance reasons, Tvar[%d]=%d, Typevar[%d]=%d\n", k, Tvar[k], k, Typevar[k]); |
printf("Error, current version can't treat for performance reasons, Tvar[%d]=%d, Typevar[%d]=%d\n", k, Tvar[k], k, Typevar[k]); |
fprintf(ficlog,"Error, current version can't treat for performance reasons, Tvar[%d]=%d, Typevar[%d]=%d\n", k, Tvar[k], k, Typevar[k]); |
fprintf(ficlog,"Error, current version can't treat for performance reasons, Tvar[%d]=%d, Typevar[%d]=%d\n", k, Tvar[k], k, Typevar[k]); |
} |
} |
Line 11611 Dummy[k] 0=dummy (0 1), 1 quantitative (
|
Line 12253 Dummy[k] 0=dummy (0 1), 1 quantitative (
|
/* printf(" modell[%d].maintype=%d, modell[%d].subtype=%d\n",k,modell[k].maintype,k,modell[k].subtype); */ |
/* printf(" modell[%d].maintype=%d, modell[%d].subtype=%d\n",k,modell[k].maintype,k,modell[k].subtype); */ |
fprintf(ficlog,"Decodemodel, k=%d, Tvar[%d]=V%d,Typevar=%d, Fixed=%d, Dummy=%d\n",k, k,Tvar[k],Typevar[k],Fixed[k],Dummy[k]); |
fprintf(ficlog,"Decodemodel, k=%d, Tvar[%d]=V%d,Typevar=%d, Fixed=%d, Dummy=%d\n",k, k,Tvar[k],Typevar[k],Fixed[k],Dummy[k]); |
} |
} |
|
ncovvta=ncovva; |
/* Searching for doublons in the model */ |
/* Searching for doublons in the model */ |
for(k1=1; k1<= cptcovt;k1++){ |
for(k1=1; k1<= cptcovt;k1++){ |
for(k2=1; k2 <k1;k2++){ |
for(k2=1; k2 <k1;k2++){ |
Line 11638 Dummy[k] 0=dummy (0 1), 1 quantitative (
|
Line 12281 Dummy[k] 0=dummy (0 1), 1 quantitative (
|
fprintf(ficlog,"ncoveff=%d, nqfveff=%d, ntveff=%d, nqtveff=%d, cptcovn=%d\n",ncoveff,nqfveff,ntveff,nqtveff,cptcovn); |
fprintf(ficlog,"ncoveff=%d, nqfveff=%d, ntveff=%d, nqtveff=%d, cptcovn=%d\n",ncoveff,nqfveff,ntveff,nqtveff,cptcovn); |
printf("ncovf=%d, ncovv=%d, ncova=%d, nsd=%d, nsq=%d\n",ncovf,ncovv,ncova,nsd,nsq); |
printf("ncovf=%d, ncovv=%d, ncova=%d, nsd=%d, nsq=%d\n",ncovf,ncovv,ncova,nsd,nsq); |
fprintf(ficlog,"ncovf=%d, ncovv=%d, ncova=%d, nsd=%d, nsq=%d\n",ncovf,ncovv,ncova,nsd, nsq); |
fprintf(ficlog,"ncovf=%d, ncovv=%d, ncova=%d, nsd=%d, nsq=%d\n",ncovf,ncovv,ncova,nsd, nsq); |
|
|
|
free_imatrix(existcomb,1,NCOVMAX,1,NCOVMAX); |
return (0); /* with covar[new additional covariate if product] and Tage if age */ |
return (0); /* with covar[new additional covariate if product] and Tage if age */ |
/*endread:*/ |
/*endread:*/ |
printf("Exiting decodemodel: "); |
printf("Exiting decodemodel: "); |
Line 12387 int main(int argc, char *argv[])
|
Line 13032 int main(int argc, char *argv[])
|
/* double ***mobaverage; */ |
/* double ***mobaverage; */ |
double wald; |
double wald; |
|
|
char line[MAXLINE]; |
char line[MAXLINE], linetmp[MAXLINE]; |
char path[MAXLINE],pathc[MAXLINE],pathcd[MAXLINE],pathtot[MAXLINE]; |
char path[MAXLINE],pathc[MAXLINE],pathcd[MAXLINE],pathtot[MAXLINE]; |
|
|
char modeltemp[MAXLINE]; |
char modeltemp[MAXLINE]; |
Line 12720 int main(int argc, char *argv[])
|
Line 13365 int main(int argc, char *argv[])
|
}else |
}else |
break; |
break; |
} |
} |
if((num_filled=sscanf(line,"model=1+age%[^.\n]", model)) !=EOF){ |
if((num_filled=sscanf(line,"model=%[^.\n]", model)) !=EOF){ /* Every character after model but dot and return */ |
|
if (num_filled != 1){ |
|
printf("ERROR %d: Model should be at minimum 'model=1+age+' instead of '%s'\n",num_filled, line); |
|
fprintf(ficlog,"ERROR %d: Model should be at minimum 'model=1+age+' instead of '%s'\n",num_filled, line); |
|
model[0]='\0'; |
|
goto end; |
|
}else{ |
|
trimbtab(linetmp,line); /* Trims multiple blanks in line */ |
|
strcpy(line, linetmp); |
|
} |
|
} |
|
if((num_filled=sscanf(line,"model=1+age%[^.\n]", model)) !=EOF){ /* Every character after 1+age but dot and return */ |
if (num_filled != 1){ |
if (num_filled != 1){ |
printf("ERROR %d: Model should be at minimum 'model=1+age+' instead of '%s'\n",num_filled, line); |
printf("ERROR %d: Model should be at minimum 'model=1+age+' instead of '%s'\n",num_filled, line); |
fprintf(ficlog,"ERROR %d: Model should be at minimum 'model=1+age+' instead of '%s'\n",num_filled, line); |
fprintf(ficlog,"ERROR %d: Model should be at minimum 'model=1+age+' instead of '%s'\n",num_filled, line); |
Line 13061 Please run with mle=-1 to get a correct
|
Line 13717 Please run with mle=-1 to get a correct
|
TvarVQind=ivector(1,NCOVMAX); /* */ |
TvarVQind=ivector(1,NCOVMAX); /* */ |
TvarVV=ivector(1,NCOVMAX); /* */ |
TvarVV=ivector(1,NCOVMAX); /* */ |
TvarVVind=ivector(1,NCOVMAX); /* */ |
TvarVVind=ivector(1,NCOVMAX); /* */ |
|
TvarVVA=ivector(1,NCOVMAX); /* */ |
|
TvarVVAind=ivector(1,NCOVMAX); /* */ |
|
TvarAVVA=ivector(1,NCOVMAX); /* */ |
|
TvarAVVAind=ivector(1,NCOVMAX); /* */ |
|
|
Tvalsel=vector(1,NCOVMAX); /* */ |
Tvalsel=vector(1,NCOVMAX); /* */ |
Tvarsel=ivector(1,NCOVMAX); /* */ |
Tvarsel=ivector(1,NCOVMAX); /* */ |
Typevar=ivector(-1,NCOVMAX); /* -1 to 2 */ |
Typevar=ivector(-1,NCOVMAX); /* -1 to 2 */ |
Fixed=ivector(-1,NCOVMAX); /* -1 to 3 */ |
Fixed=ivector(-1,NCOVMAX); /* -1 to 3 */ |
Dummy=ivector(-1,NCOVMAX); /* -1 to 3 */ |
Dummy=ivector(-1,NCOVMAX); /* -1 to 3 */ |
|
DummyV=ivector(-1,NCOVMAX); /* 1 to 3 */ |
|
FixedV=ivector(-1,NCOVMAX); /* 1 to 3 */ |
|
|
/* V2+V1+V4+age*V3 is a model with 4 covariates (3 plus signs). |
/* V2+V1+V4+age*V3 is a model with 4 covariates (3 plus signs). |
For each model-covariate stores the data-covariate id. Tvar[1]=2, Tvar[2]=1, Tvar[3]=4, |
For each model-covariate stores the data-covariate id. Tvar[1]=2, Tvar[2]=1, Tvar[3]=4, |
Tvar[4=age*V3] is 3 and 'age' is recorded in Tage. |
Tvar[4=age*V3] is 3 and 'age' is recorded in Tage. |
Line 13086 Please run with mle=-1 to get a correct
|
Line 13749 Please run with mle=-1 to get a correct
|
Tvard=imatrix(1,NCOVMAX,1,2); /* n=Tvard[k1][1] and m=Tvard[k1][2] gives the couple n,m of the k1 th product Vn*Vm |
Tvard=imatrix(1,NCOVMAX,1,2); /* n=Tvard[k1][1] and m=Tvard[k1][2] gives the couple n,m of the k1 th product Vn*Vm |
* For V3*V2 (in V2+V1+V1*V4+age*V3+V3*V2), V3*V2 position is 2nd. |
* For V3*V2 (in V2+V1+V1*V4+age*V3+V3*V2), V3*V2 position is 2nd. |
* Tvard[k1=2][1]=3 (V3) Tvard[k1=2][2]=2(V2) */ |
* Tvard[k1=2][1]=3 (V3) Tvard[k1=2][2]=2(V2) */ |
Tvardk=imatrix(1,NCOVMAX,1,2); |
Tvardk=imatrix(0,NCOVMAX,1,2); |
Tage=ivector(1,NCOVMAX); /* Gives the covariate id of covariates associated with age: V2 + V1 + age*V4 + V3*age |
Tage=ivector(1,NCOVMAX); /* Gives the covariate id of covariates associated with age: V2 + V1 + age*V4 + V3*age |
4 covariates (3 plus signs) |
4 covariates (3 plus signs) |
Tage[1=V3*age]= 4; Tage[2=age*V4] = 3 |
Tage[1=V3*age]= 4; Tage[2=age*V4] = 3 |
Line 13106 Please run with mle=-1 to get a correct
|
Line 13769 Please run with mle=-1 to get a correct
|
* Tmodelqind[1]=1,Tvaraff[1]@9={4, |
* Tmodelqind[1]=1,Tvaraff[1]@9={4, |
* 3, 1, 0, 0, 0, 0, 0, 0}, |
* 3, 1, 0, 0, 0, 0, 0, 0}, |
* model=V5+V4+V3+V4*V3+V5*age+V2+V1*V2+V1*age+V1*/ |
* model=V5+V4+V3+V4*V3+V5*age+V2+V1*V2+V1*age+V1*/ |
|
|
|
/* Probably useless zeroes */ |
|
for(i=1;i<NCOVMAX;i++){ |
|
DummyV[i]=0; |
|
FixedV[i]=0; |
|
} |
|
|
|
for(i=1; i <=ncovcol;i++){ |
|
DummyV[i]=0; |
|
FixedV[i]=0; |
|
} |
|
for(i=ncovcol+1; i <=ncovcol+nqv;i++){ |
|
DummyV[i]=1; |
|
FixedV[i]=0; |
|
} |
|
for(i=ncovcol+nqv+1; i <=ncovcol+nqv+ntv;i++){ |
|
DummyV[i]=0; |
|
FixedV[i]=1; |
|
} |
|
for(i=ncovcol+nqv+ntv+1; i <=ncovcol+nqv+ntv+nqtv;i++){ |
|
DummyV[i]=1; |
|
FixedV[i]=1; |
|
} |
|
for(i=1; i <=ncovcol+nqv+ntv+nqtv;i++){ |
|
printf("Covariate type in the data: V%d, DummyV(V%d)=%d, FixedV(V%d)=%d\n",i,i,DummyV[i],i,FixedV[i]); |
|
fprintf(ficlog,"Covariate type in the data: V%d, DummyV(V%d)=%d, FixedV(V%d)=%d\n",i,i,DummyV[i],i,FixedV[i]); |
|
} |
|
|
|
|
|
|
/* Main decodemodel */ |
/* Main decodemodel */ |
|
|
|
|
Line 13682 Please run with mle=-1 to get a correct
|
Line 14375 Please run with mle=-1 to get a correct
|
fprintf(ficres," + V%d*V%d ",Tvard[Tposprod[j]][1],Tvard[Tposprod[j]][2]); |
fprintf(ficres," + V%d*V%d ",Tvard[Tposprod[j]][1],Tvard[Tposprod[j]][2]); |
fprintf(ficlog," + V%d*V%d ",Tvard[Tposprod[j]][1],Tvard[Tposprod[j]][2]); |
fprintf(ficlog," + V%d*V%d ",Tvard[Tposprod[j]][1],Tvard[Tposprod[j]][2]); |
fprintf(fichtm, "<th>+ V%d*V%d</th>",Tvard[Tposprod[j]][1],Tvard[Tposprod[j]][2]); |
fprintf(fichtm, "<th>+ V%d*V%d</th>",Tvard[Tposprod[j]][1],Tvard[Tposprod[j]][2]); |
|
}else if(Typevar[j]==3) { /* TO VERIFY */ |
|
printf(" + V%d*V%d*age ",Tvard[Tposprod[j]][1],Tvard[Tposprod[j]][2]); |
|
fprintf(ficres," + V%d*V%d*age ",Tvard[Tposprod[j]][1],Tvard[Tposprod[j]][2]); |
|
fprintf(ficlog," + V%d*V%d*age ",Tvard[Tposprod[j]][1],Tvard[Tposprod[j]][2]); |
|
fprintf(fichtm, "<th>+ V%d*V%d*age</th>",Tvard[Tposprod[j]][1],Tvard[Tposprod[j]][2]); |
} |
} |
} |
} |
printf("\n"); |
printf("\n"); |
Line 13741 Please run with mle=-1 to get a correct
|
Line 14439 Please run with mle=-1 to get a correct
|
fprintf(fichtm, "<th>+ V%d*age</th>",Tvar[j]); |
fprintf(fichtm, "<th>+ V%d*age</th>",Tvar[j]); |
}else if(Typevar[j]==2) { |
}else if(Typevar[j]==2) { |
fprintf(fichtm, "<th>+ V%d*V%d</th>",Tvard[Tposprod[j]][1],Tvard[Tposprod[j]][2]); |
fprintf(fichtm, "<th>+ V%d*V%d</th>",Tvard[Tposprod[j]][1],Tvard[Tposprod[j]][2]); |
|
}else if(Typevar[j]==3) { /* TO VERIFY */ |
|
fprintf(fichtm, "<th>+ V%d*V%d*age</th>",Tvard[Tposprod[j]][1],Tvard[Tposprod[j]][2]); |
} |
} |
} |
} |
fprintf(fichtm, "</tr>\n"); |
fprintf(fichtm, "</tr>\n"); |
Line 13798 Please run with mle=-1 to get a correct
|
Line 14498 Please run with mle=-1 to get a correct
|
} |
} |
|
|
fprintf(ficres,"# Covariance matrix \n# 121 Var(a12)\n# 122 Cov(b12,a12) Var(b12)\n# ...\n# 232 Cov(b23,a12) Cov(b23,b12) ... Var (b23)\n"); |
fprintf(ficres,"# Covariance matrix \n# 121 Var(a12)\n# 122 Cov(b12,a12) Var(b12)\n# ...\n# 232 Cov(b23,a12) Cov(b23,b12) ... Var (b23)\n"); |
if(mle >= 1) /* To big for the screen */ |
if(mle >= 1) /* Too big for the screen */ |
printf("# Covariance matrix \n# 121 Var(a12)\n# 122 Cov(b12,a12) Var(b12)\n# ...\n# 232 Cov(b23,a12) Cov(b23,b12) ... Var (b23)\n"); |
printf("# Covariance matrix \n# 121 Var(a12)\n# 122 Cov(b12,a12) Var(b12)\n# ...\n# 232 Cov(b23,a12) Cov(b23,b12) ... Var (b23)\n"); |
fprintf(ficlog,"# Covariance matrix \n# 121 Var(a12)\n# 122 Cov(b12,a12) Var(b12)\n# ...\n# 232 Cov(b23,a12) Cov(b23,b12) ... Var (b23)\n"); |
fprintf(ficlog,"# Covariance matrix \n# 121 Var(a12)\n# 122 Cov(b12,a12) Var(b12)\n# ...\n# 232 Cov(b23,a12) Cov(b23,b12) ... Var (b23)\n"); |
/* # 121 Var(a12)\n\ */ |
/* # 121 Var(a12)\n\ */ |
Line 14154 Please run with mle=-1 to get a correct
|
Line 14854 Please run with mle=-1 to get a correct
|
date2dmy(datebackf,&jbackf, &mbackf, &anbackf); |
date2dmy(datebackf,&jbackf, &mbackf, &anbackf); |
} |
} |
|
|
printinggnuplot(fileresu, optionfilefiname,ageminpar,agemaxpar,bage, fage, prevfcast, prevbcast, pathc,p, (int)anprojd-bage, (int)anbackd-fage); |
printinggnuplot(fileresu, optionfilefiname,ageminpar,agemaxpar,bage, fage, prevfcast, prevbcast, pathc,p, (int)anprojd-bage, (int)anbackd-fage);/* HERE valgrind Tvard*/ |
} |
} |
printinghtml(fileresu,title,datafile, firstpass, lastpass, stepm, weightopt, \ |
printinghtml(fileresu,title,datafile, firstpass, lastpass, stepm, weightopt, \ |
model,imx,jmin,jmax,jmean,rfileres,popforecast,mobilav,prevfcast,mobilavproj,prevbcast, estepm, \ |
model,imx,jmin,jmax,jmean,rfileres,popforecast,mobilav,prevfcast,mobilavproj,prevbcast, estepm, \ |
Line 14304 Please run with mle=-1 to get a correct
|
Line 15004 Please run with mle=-1 to get a correct
|
|
|
pstamp(ficreseij); |
pstamp(ficreseij); |
|
|
i1=pow(2,cptcoveff); /* Number of combination of dummy covariates */ |
/* i1=pow(2,cptcoveff); /\* Number of combination of dummy covariates *\/ */ |
if (cptcovn < 1){i1=1;} |
/* if (cptcovn < 1){i1=1;} */ |
|
|
for(nres=1; nres <= nresult; nres++) /* For each resultline */ |
for(nres=1; nres <= nresult; nres++){ /* For each resultline */ |
for(k=1; k<=i1;k++){ /* For any combination of dummy covariates, fixed and varying */ |
/* for(k=1; k<=i1;k++){ /\* For any combination of dummy covariates, fixed and varying *\/ */ |
if(i1 != 1 && TKresult[nres]!= k) |
/* if(i1 != 1 && TKresult[nres]!= k) */ |
continue; |
/* continue; */ |
fprintf(ficreseij,"\n#****** "); |
fprintf(ficreseij,"\n#****** "); |
printf("\n#****** "); |
printf("\n#****** "); |
for(j=1;j<=cptcoveff;j++) { |
for(j=1;j<=cptcovs;j++){ |
fprintf(ficreseij,"V%d=%d ",Tvaraff[j],nbcode[Tvaraff[j]][codtabm(k,TnsdVar[Tvaraff[j]])]); |
/* for(j=1;j<=cptcoveff;j++) { */ |
printf("V%d=%d ",Tvaraff[j],nbcode[Tvaraff[j]][codtabm(k,TnsdVar[Tvaraff[j]])]); |
/* fprintf(ficreseij,"V%d=%d ",Tvaraff[j],nbcode[Tvaraff[j]][codtabm(k,TnsdVar[Tvaraff[j]])]); */ |
|
fprintf(ficreseij," V%d=%lg ",Tvresult[nres][j],TinvDoQresult[nres][Tvresult[nres][j]]); |
|
printf(" V%d=%lg ",Tvresult[nres][j],TinvDoQresult[nres][Tvresult[nres][j]]); |
|
/* printf("V%d=%d ",Tvaraff[j],nbcode[Tvaraff[j]][codtabm(k,TnsdVar[Tvaraff[j]])]); */ |
} |
} |
for (j=1; j<= nsq; j++){ /* For each selected (single) quantitative value */ |
for (j=1; j<= nsq; j++){ /* For each selected (single) quantitative value */ |
printf(" V%d=%lg ",TvarsQ[j], TinvDoQresult[nres][TvarsQ[j]]); /* TvarsQ[j] gives the name of the jth quantitative (fixed or time v) */ |
printf(" V%d=%lg ",TvarsQ[j], TinvDoQresult[nres][TvarsQ[j]]); /* TvarsQ[j] gives the name of the jth quantitative (fixed or time v) */ |
Line 14384 Please run with mle=-1 to get a correct
|
Line 15087 Please run with mle=-1 to get a correct
|
/* */ |
/* */ |
if(i1 != 1 && TKresult[nres]!= k) /* TKresult[nres] is the combination of this nres resultline. All the i1 combinations are not output */ |
if(i1 != 1 && TKresult[nres]!= k) /* TKresult[nres] is the combination of this nres resultline. All the i1 combinations are not output */ |
continue; |
continue; |
printf("\n# model %s \n#****** Result for:", model); |
printf("\n# model %s \n#****** Result for:", model); /* HERE model is empty */ |
fprintf(ficrest,"\n# model %s \n#****** Result for:", model); |
fprintf(ficrest,"\n# model %s \n#****** Result for:", model); |
fprintf(ficlog,"\n# model %s \n#****** Result for:", model); |
fprintf(ficlog,"\n# model %s \n#****** Result for:", model); |
/* It might not be a good idea to mix dummies and quantitative */ |
/* It might not be a good idea to mix dummies and quantitative */ |
Line 14559 Please run with mle=-1 to get a correct
|
Line 15262 Please run with mle=-1 to get a correct
|
|
|
|
|
free_vector(weight,firstobs,lastobs); |
free_vector(weight,firstobs,lastobs); |
free_imatrix(Tvardk,1,NCOVMAX,1,2); |
free_imatrix(Tvardk,0,NCOVMAX,1,2); |
free_imatrix(Tvard,1,NCOVMAX,1,2); |
free_imatrix(Tvard,1,NCOVMAX,1,2); |
free_imatrix(s,1,maxwav+1,firstobs,lastobs); |
free_imatrix(s,1,maxwav+1,firstobs,lastobs); |
free_matrix(anint,1,maxwav,firstobs,lastobs); |
free_matrix(anint,1,maxwav,firstobs,lastobs); |
Line 14601 Please run with mle=-1 to get a correct
|
Line 15304 Please run with mle=-1 to get a correct
|
free_ivector(ncodemaxwundef,1,NCOVMAX); |
free_ivector(ncodemaxwundef,1,NCOVMAX); |
free_ivector(Dummy,-1,NCOVMAX); |
free_ivector(Dummy,-1,NCOVMAX); |
free_ivector(Fixed,-1,NCOVMAX); |
free_ivector(Fixed,-1,NCOVMAX); |
free_ivector(DummyV,1,NCOVMAX); |
free_ivector(DummyV,-1,NCOVMAX); |
free_ivector(FixedV,1,NCOVMAX); |
free_ivector(FixedV,-1,NCOVMAX); |
free_ivector(Typevar,-1,NCOVMAX); |
free_ivector(Typevar,-1,NCOVMAX); |
free_ivector(Tvar,1,NCOVMAX); |
free_ivector(Tvar,1,NCOVMAX); |
free_ivector(TvarsQ,1,NCOVMAX); |
free_ivector(TvarsQ,1,NCOVMAX); |
Line 14624 Please run with mle=-1 to get a correct
|
Line 15327 Please run with mle=-1 to get a correct
|
free_ivector(TvarVDind,1,NCOVMAX); |
free_ivector(TvarVDind,1,NCOVMAX); |
free_ivector(TvarVQ,1,NCOVMAX); |
free_ivector(TvarVQ,1,NCOVMAX); |
free_ivector(TvarVQind,1,NCOVMAX); |
free_ivector(TvarVQind,1,NCOVMAX); |
|
free_ivector(TvarAVVA,1,NCOVMAX); |
|
free_ivector(TvarAVVAind,1,NCOVMAX); |
|
free_ivector(TvarVVA,1,NCOVMAX); |
|
free_ivector(TvarVVAind,1,NCOVMAX); |
free_ivector(TvarVV,1,NCOVMAX); |
free_ivector(TvarVV,1,NCOVMAX); |
free_ivector(TvarVVind,1,NCOVMAX); |
free_ivector(TvarVVind,1,NCOVMAX); |
|
|