");
m=pow(2,cptcoveff);
if (cptcovn < 1) {m=1;ncodemax[1]=1;}
+ fprintf(fichtm," \n
- Graphs
");
+
+ jj1=0;
+
+ fprintf(fichtm," \n
");
+ for(nres=1; nres <= nresult; nres++) /* For each resultline */
+ for(k1=1; k1<=m;k1++){ /* For each combination of covariate */
+ if(m != 1 && TKresult[nres]!= k1)
+ continue;
+ jj1++;
+ if (cptcovn > 0) {
+ fprintf(fichtm,"\n- ");
+
+ /* if(nqfveff+nqtveff 0) */ /* Test to be done */
+ fprintf(fichtm,"************ Results for covariates");
+ for (cpt=1; cpt<=cptcoveff;cpt++){
+ fprintf(fichtm," V%d=%d ",Tvresult[nres][cpt],(int)Tresult[nres][cpt]);
+ }
+ for (k4=1; k4<= nsq; k4++){ /* For each selected (single) quantitative value */
+ fprintf(fichtm," V%d=%f ",Tvqresult[nres][k4],Tqresult[nres][k4]);
+ }
+ if(invalidvarcomb[k1]){
+ fprintf(fichtm," Warning Combination (%d) ignored because no cases ",k1);
+ continue;
+ }
+ fprintf(fichtm,"
");
+ } /* cptcovn >0 */
+ }
+ fprintf(fichtm," \n
");
+
jj1=0;
for(nres=1; nres <= nresult; nres++) /* For each resultline */
@@ -6450,6 +6539,15 @@ void printinghtml(char fileresu[], char
/* for(i1=1; i1<=ncodemax[k1];i1++){ */
jj1++;
if (cptcovn > 0) {
+ fprintf(fichtm,"\n");
+
fprintf(fichtm,"
************ Results for covariates");
for (cpt=1; cpt<=cptcoveff;cpt++){
fprintf(fichtm," V%d=%d ",Tvresult[nres][cpt],(int)Tresult[nres][cpt]);
@@ -6495,13 +6593,13 @@ divided by h: hPij
}
/* Period (stable) prevalence in each health state */
for(cpt=1; cpt<=nlstate;cpt++){
- fprintf(fichtm,"
\n- Convergence to period (stable) prevalence in state %d. Or probability to be in state %d some years earlier, knowing that we will be in state (1 to %d) at different ages. %s_%d-%d-%d.svg
\
-![](\"%s_%d-%d-%d.svg\")
", cpt, cpt, nlstate, subdirf2(optionfilefiname,"P_"),cpt,k1,nres,subdirf2(optionfilefiname,"P_"),cpt,k1,nres,subdirf2(optionfilefiname,"P_"),cpt,k1,nres);
+ fprintf(fichtm,"
\n- Convergence to period (stable) prevalence in state %d. Or probability for a person being in state (1 to %d) at different ages, to be in state %d some years after. %s_%d-%d-%d.svg
\
+", cpt, nlstate, cpt, subdirf2(optionfilefiname,"P_"),cpt,k1,nres,subdirf2(optionfilefiname,"P_"),cpt,k1,nres,subdirf2(optionfilefiname,"P_"),cpt,k1,nres);
}
if(backcast==1){
/* Period (stable) back prevalence in each health state */
for(cpt=1; cpt<=nlstate;cpt++){
- fprintf(fichtm,"
\n- Convergence to mixed (stable) back prevalence in state %d. Or probability to be in state %d at a younger age, knowing that we will be in state (1 to %d) at different older ages. %s_%d-%d-%d.svg
\
+ fprintf(fichtm,"
\n- Convergence to mixed (stable) back prevalence in state %d. Or probability for a person to be in state %d at a younger age, knowing that she/he was in state (1 to %d) at different older ages. %s_%d-%d-%d.svg
\
", cpt, cpt, nlstate, subdirf2(optionfilefiname,"PB_"),cpt,k1,nres,subdirf2(optionfilefiname,"PB_"),cpt,k1,nres,subdirf2(optionfilefiname,"PB_"),cpt,k1,nres);
}
}
@@ -6618,7 +6716,7 @@ true period expectancies (those weighted
void printinggnuplot(char fileresu[], char optionfilefiname[], double ageminpar, double agemaxpar, double fage , int prevfcast, int backcast, char pathc[], double p[]){
char dirfileres[132],optfileres[132];
- char gplotcondition[132];
+ char gplotcondition[132], gplotlabel[132];
int cpt=0,k1=0,i=0,k=0,j=0,jk=0,k2=0,k3=0,k4=0,ij=0, ijp=0, l=0;
int lv=0, vlv=0, kl=0;
int ng=0;
@@ -6677,6 +6775,7 @@ void printinggnuplot(char fileresu[], ch
/* We are interested in selected combination by the resultline */
/* printf("\n# 1st: Period (stable) prevalence with CI: 'VPL_' files and live state =%d ", cpt); */
fprintf(ficgp,"\n# 1st: Period (stable) prevalence with CI: 'VPL_' files and live state =%d ", cpt);
+ strcpy(gplotlabel,"(");
for (k=1; k<=cptcoveff; k++){ /* For each covariate k get corresponding value lv for combination k1 */
lv= decodtabm(k1,k,cptcoveff); /* Should be the value of the covariate corresponding to k1 combination */
/* decodtabm(1,1,4) = 1 because h=1 k= (1) 1 1 1 */
@@ -6686,11 +6785,14 @@ void printinggnuplot(char fileresu[], ch
/* For each combination of covariate k1 (V1=1, V3=0), we printed the current covariate k and its value vlv */
/* printf(" V%d=%d ",Tvaraff[k],vlv); */
fprintf(ficgp," V%d=%d ",Tvaraff[k],vlv);
+ sprintf(gplotlabel+strlen(gplotlabel)," V%d=%d ",Tvaraff[k],vlv);
}
for (k4=1; k4<= nsq; k4++){ /* For each selected (single) quantitative value */
/* printf(" V%d=%f ",Tvqresult[nres][k4],Tqresult[nres][k4]); */
fprintf(ficgp," V%d=%f ",Tvqresult[nres][k4],Tqresult[nres][k4]);
- }
+ sprintf(gplotlabel+strlen(gplotlabel)," V%d=%f ",Tvqresult[nres][k4],Tqresult[nres][k4]);
+ }
+ strcpy(gplotlabel+strlen(gplotlabel),")");
/* printf("\n#\n"); */
fprintf(ficgp,"\n#\n");
if(invalidvarcomb[k1]){
@@ -6701,6 +6803,7 @@ void printinggnuplot(char fileresu[], ch
fprintf(ficgp,"\nset out \"%s_%d-%d-%d.svg\" \n",subdirf2(optionfilefiname,"V_"),cpt,k1,nres);
fprintf(ficgp,"\n#set out \"V_%s_%d-%d-%d.svg\" \n",optionfilefiname,cpt,k1,nres);
+ fprintf(ficgp,"set label \"Alive state %d %s\" at graph 0.98,0.5 center rotate font \"Helvetica,12\"\n",cpt,gplotlabel);
fprintf(ficgp,"set xlabel \"Age\" \nset ylabel \"Probability\" \nset ter svg size 640, 480\nplot [%.f:%.f] \"%s\" every :::%d::%d u 1:($2==%d ? $3:1/0) \"%%lf %%lf",ageminpar,fage,subdirf2(fileresu,"VPL_"),nres-1,nres-1,nres);
/* fprintf(ficgp,"set xlabel \"Age\" \nset ylabel \"Probability\" \nset ter svg size 640, 480\nplot [%.f:%.f] \"%s\" every :::%d::%d u 1:($2==%d ? $3:1/0) \"%%lf %%lf",ageminpar,fage,subdirf2(fileresu,"VPL_"),k1-1,k1-1,nres); */
/* k1-1 error should be nres-1*/
@@ -6718,7 +6821,34 @@ void printinggnuplot(char fileresu[], ch
if (i==cpt) fprintf(ficgp," %%lf (%%lf)");
else fprintf(ficgp," %%*lf (%%*lf)");
}
- fprintf(ficgp,"\" t\"\" w l lt 1,\"%s\" every :::%d::%d u 1:($%d) t\"Observed prevalence\" w l lt 2",subdirf2(fileresu,"P_"),k1-1,k1-1,2+4*(cpt-1));
+ /* fprintf(ficgp,"\" t\"\" w l lt 1,\"%s\" every :::%d::%d u 1:($%d) t\"Observed prevalence\" w l lt 2",subdirf2(fileresu,"P_"),k1-1,k1-1,2+4*(cpt-1)); */
+
+ fprintf(ficgp,"\" t\"\" w l lt 1,\"%s\" u 1:((",subdirf2(fileresu,"P_"));
+ if(cptcoveff ==0){
+ fprintf(ficgp,"$%d)) t 'Observed prevalence in state %d' with line lt 3", 2+(cpt-1), cpt );
+ }else{
+ kl=0;
+ for (k=1; k<=cptcoveff; k++){ /* For each combination of covariate */
+ lv= decodtabm(k1,k,cptcoveff); /* Should be the covariate value corresponding to k1 combination and kth covariate */
+ /* decodtabm(1,1,4) = 1 because h=1 k= (1) 1 1 1 */
+ /* decodtabm(1,2,4) = 1 because h=1 k= 1 (1) 1 1 */
+ /* decodtabm(13,3,4)= 2 because h=13 k= 1 1 (2) 2 */
+ vlv= nbcode[Tvaraff[k]][lv];
+ kl++;
+ /* kl=6+(cpt-1)*(nlstate+1)+1+(i-1); /\* 6+(1-1)*(2+1)+1+(1-1)=7, 6+(2-1)(2+1)+1+(1-1)=10 *\/ */
+ /*6+(cpt-1)*(nlstate+1)+1+(i-1)+(nlstate+1)*nlstate; 6+(1-1)*(2+1)+1+(1-1) +(2+1)*2=13 */
+ /*6+1+(i-1)+(nlstate+1)*nlstate; 6+1+(1-1) +(2+1)*2=13 */
+ /* '' u 6:(($1==1 && $2==0 && $3==2 && $4==0)? $9/(1.-$15) : 1/0):($5==2000? 3:2) t 'p.1' with line lc variable*/
+ if(k==cptcoveff){
+ fprintf(ficgp,"$%d==%d && $%d==%d)? $%d : 1/0) t 'Observed prevalence in state %d' w l lt 2",kl+1, Tvaraff[k],kl+1+1,nbcode[Tvaraff[k]][lv], \
+ 2+cptcoveff*2+3*(cpt-1), cpt ); /* 4 or 6 ?*/
+ }else{
+ fprintf(ficgp,"$%d==%d && $%d==%d && ",kl+1, Tvaraff[k],kl+1+1,nbcode[Tvaraff[k]][lv]);
+ kl++;
+ }
+ } /* end covariate */
+ } /* end if no covariate */
+
if(backcast==1){ /* We need to get the corresponding values of the covariates involved in this combination k1 */
/* fprintf(ficgp,",\"%s\" every :::%d::%d u 1:($%d) t\"Backward stable prevalence\" w l lt 3",subdirf2(fileresu,"PLB_"),k1-1,k1-1,1+cpt); */
fprintf(ficgp,",\"%s\" u 1:((",subdirf2(fileresu,"PLB_")); /* Age is in 1, nres in 2 to be fixed */
@@ -6747,7 +6877,7 @@ void printinggnuplot(char fileresu[], ch
} /* end covariate */
} /* end if no covariate */
} /* end if backcast */
- fprintf(ficgp,"\nset out \n");
+ fprintf(ficgp,"\nset out ;unset label;\n");
} /* nres */
} /* k1 */
} /* cpt */
@@ -6759,6 +6889,7 @@ void printinggnuplot(char fileresu[], ch
if(m != 1 && TKresult[nres]!= k1)
continue;
fprintf(ficgp,"\n# 2nd: Total life expectancy with CI: 't' files ");
+ strcpy(gplotlabel,"(");
for (k=1; k<=cptcoveff; k++){ /* For each covariate and each value */
lv= decodtabm(k1,k,cptcoveff); /* Should be the covariate number corresponding to k1 combination */
/* decodtabm(1,1,4) = 1 because h=1 k= (1) 1 1 1 */
@@ -6766,12 +6897,15 @@ void printinggnuplot(char fileresu[], ch
/* decodtabm(13,3,4)= 2 because h=13 k= 1 1 (2) 2 */
vlv= nbcode[Tvaraff[k]][lv];
fprintf(ficgp," V%d=%d ",Tvaraff[k],vlv);
+ sprintf(gplotlabel+strlen(gplotlabel)," V%d=%d ",Tvaraff[k],vlv);
}
/* for(k=1; k <= ncovds; k++){ */
for (k4=1; k4<= nsq; k4++){ /* For each selected (single) quantitative value */
printf(" V%d=%f ",Tvqresult[nres][k4],Tqresult[nres][k4]);
fprintf(ficgp," V%d=%f ",Tvqresult[nres][k4],Tqresult[nres][k4]);
+ sprintf(gplotlabel+strlen(gplotlabel)," V%d=%f ",Tvqresult[nres][k4],Tqresult[nres][k4]);
}
+ strcpy(gplotlabel+strlen(gplotlabel),")");
fprintf(ficgp,"\n#\n");
if(invalidvarcomb[k1]){
fprintf(ficgp,"#Combination (%d) ignored because no cases \n",k1);
@@ -6780,9 +6914,10 @@ void printinggnuplot(char fileresu[], ch
fprintf(ficgp,"\nset out \"%s_%d-%d.svg\" \n",subdirf2(optionfilefiname,"E_"),k1,nres);
for(vpopbased=0; vpopbased <= popbased; vpopbased++){ /* Done for vpopbased=0 and vpopbased=1 if popbased==1*/
- if(vpopbased==0)
+ fprintf(ficgp,"\nset label \"popbased %d %s\" at graph 0.98,0.5 center rotate font \"Helvetica,12\"\n",vpopbased,gplotlabel);
+ if(vpopbased==0){
fprintf(ficgp,"set ylabel \"Years\" \nset ter svg size 640, 480\nplot [%.f:%.f] ",ageminpar,fage);
- else
+ }else
fprintf(ficgp,"\nreplot ");
for (i=1; i<= nlstate+1 ; i ++) {
k=2*i;
@@ -6808,7 +6943,7 @@ void printinggnuplot(char fileresu[], ch
else fprintf(ficgp,"\" t\"\" w l lt 0,\\\n");
} /* state */
} /* vpopbased */
- fprintf(ficgp,"\nset out;set out \"%s_%d-%d.svg\"; replot; set out; \n",subdirf2(optionfilefiname,"E_"),k1,nres); /* Buggy gnuplot */
+ fprintf(ficgp,"\nset out;set out \"%s_%d-%d.svg\"; replot; set out; unset label;\n",subdirf2(optionfilefiname,"E_"),k1,nres); /* Buggy gnuplot */
} /* end nres */
} /* k1 end 2 eme*/
@@ -6821,6 +6956,7 @@ void printinggnuplot(char fileresu[], ch
for (cpt=1; cpt<= nlstate ; cpt ++) {
fprintf(ficgp,"\n\n# 3d: Life expectancy with EXP_ files: combination=%d state=%d",k1, cpt);
+ strcpy(gplotlabel,"(");
for (k=1; k<=cptcoveff; k++){ /* For each covariate and each value */
lv= decodtabm(k1,k,cptcoveff); /* Should be the covariate number corresponding to k1 combination */
/* decodtabm(1,1,4) = 1 because h=1 k= (1) 1 1 1 */
@@ -6828,10 +6964,13 @@ void printinggnuplot(char fileresu[], ch
/* decodtabm(13,3,4)= 2 because h=13 k= 1 1 (2) 2 */
vlv= nbcode[Tvaraff[k]][lv];
fprintf(ficgp," V%d=%d ",Tvaraff[k],vlv);
+ sprintf(gplotlabel+strlen(gplotlabel)," V%d=%d ",Tvaraff[k],vlv);
}
for (k4=1; k4<= nsq; k4++){ /* For each selected (single) quantitative value */
fprintf(ficgp," V%d=%f ",Tvqresult[nres][k4],Tqresult[nres][k4]);
+ sprintf(gplotlabel+strlen(gplotlabel)," V%d=%f ",Tvqresult[nres][k4],Tqresult[nres][k4]);
}
+ strcpy(gplotlabel+strlen(gplotlabel),")");
fprintf(ficgp,"\n#\n");
if(invalidvarcomb[k1]){
fprintf(ficgp,"#Combination (%d) ignored because no cases \n",k1);
@@ -6841,6 +6980,7 @@ void printinggnuplot(char fileresu[], ch
/* k=2+nlstate*(2*cpt-2); */
k=2+(nlstate+1)*(cpt-1);
fprintf(ficgp,"\nset out \"%s_%d-%d-%d.svg\" \n",subdirf2(optionfilefiname,"EXP_"),cpt,k1,nres);
+ fprintf(ficgp,"set label \"%s\" at graph 0.98,0.5 center rotate font \"Helvetica,12\"\n",gplotlabel);
fprintf(ficgp,"set ter svg size 640, 480\n\
plot [%.f:%.f] \"%s\" every :::%d::%d u 1:%d t \"e%d1\" w l",ageminpar,fage,subdirf2(fileresu,"E_"),nres-1,nres-1,k,cpt);
/*fprintf(ficgp,",\"e%s\" every :::%d::%d u 1:($%d-2*$%d) \"\%%lf ",fileres,k1-1,k1-1,k,k+1);
@@ -6858,6 +6998,7 @@ plot [%.f:%.f] \"%s\" every :::%d::%d u
}
fprintf(ficgp," ,\"%s\" every :::%d::%d u 1:%d t \"e%d.\" w l",subdirf2(fileresu,"E_"),nres-1,nres-1,k+nlstate,cpt);
}
+ fprintf(ficgp,"\nunset label;\n");
} /* end nres */
} /* end kl 3eme */
@@ -6868,6 +7009,7 @@ plot [%.f:%.f] \"%s\" every :::%d::%d u
if(m != 1 && TKresult[nres]!= k1)
continue;
for (cpt=1; cpt<=nlstate ; cpt ++) { /* For each life state cpt*/
+ strcpy(gplotlabel,"(");
fprintf(ficgp,"\n#\n#\n# Survival functions in state j : 'LIJ_' files, cov=%d state=%d",k1, cpt);
for (k=1; k<=cptcoveff; k++){ /* For each covariate and each value */
lv= decodtabm(k1,k,cptcoveff); /* Should be the covariate number corresponding to k1 combination */
@@ -6876,10 +7018,13 @@ plot [%.f:%.f] \"%s\" every :::%d::%d u
/* decodtabm(13,3,4)= 2 because h=13 k= 1 1 (2) 2 */
vlv= nbcode[Tvaraff[k]][lv];
fprintf(ficgp," V%d=%d ",Tvaraff[k],vlv);
+ sprintf(gplotlabel+strlen(gplotlabel)," V%d=%d ",Tvaraff[k],vlv);
}
for (k4=1; k4<= nsq; k4++){ /* For each selected (single) quantitative value */
fprintf(ficgp," V%d=%f ",Tvqresult[nres][k4],Tqresult[nres][k4]);
+ sprintf(gplotlabel+strlen(gplotlabel)," V%d=%f ",Tvqresult[nres][k4],Tqresult[nres][k4]);
}
+ strcpy(gplotlabel+strlen(gplotlabel),")");
fprintf(ficgp,"\n#\n");
if(invalidvarcomb[k1]){
fprintf(ficgp,"#Combination (%d) ignored because no cases \n",k1);
@@ -6887,6 +7032,7 @@ plot [%.f:%.f] \"%s\" every :::%d::%d u
}
fprintf(ficgp,"\nset out \"%s_%d-%d-%d.svg\" \n",subdirf2(optionfilefiname,"LIJ_"),cpt,k1,nres);
+ fprintf(ficgp,"set label \"Alive state %d %s\" at graph 0.98,0.5 center rotate font \"Helvetica,12\"\n",cpt,gplotlabel);
fprintf(ficgp,"set xlabel \"Age\" \nset ylabel \"Probability to be alive\" \n\
set ter svg size 640, 480\nunset log y\nplot [%.f:%.f] ", ageminpar, agemaxpar);
k=3;
@@ -6902,7 +7048,7 @@ set ter svg size 640, 480\nunset log y\n
fprintf(ficgp,"+$%d",k+l+j-1);
fprintf(ficgp,")) t \"l(%d,%d)\" w l",i,cpt);
} /* nlstate */
- fprintf(ficgp,"\nset out\n");
+ fprintf(ficgp,"\nset out; unset label;\n");
} /* end cpt state*/
} /* end nres */
} /* end covariate k1 */
@@ -6914,6 +7060,7 @@ set ter svg size 640, 480\nunset log y\n
if(m != 1 && TKresult[nres]!= k1)
continue;
for (cpt=1; cpt<=nlstate ; cpt ++) { /* For each inital state */
+ strcpy(gplotlabel,"(");
fprintf(ficgp,"\n#\n#\n# Survival functions in state j and all livestates from state i by final state j: 'lij' files, cov=%d state=%d",k1, cpt);
for (k=1; k<=cptcoveff; k++){ /* For each covariate and each value */
lv= decodtabm(k1,k,cptcoveff); /* Should be the covariate number corresponding to k1 combination */
@@ -6922,10 +7069,13 @@ set ter svg size 640, 480\nunset log y\n
/* decodtabm(13,3,4)= 2 because h=13 k= 1 1 (2) 2 */
vlv= nbcode[Tvaraff[k]][lv];
fprintf(ficgp," V%d=%d ",Tvaraff[k],vlv);
+ sprintf(gplotlabel+strlen(gplotlabel)," V%d=%d ",Tvaraff[k],vlv);
}
for (k4=1; k4<= nsq; k4++){ /* For each selected (single) quantitative value */
fprintf(ficgp," V%d=%f ",Tvqresult[nres][k4],Tqresult[nres][k4]);
+ sprintf(gplotlabel+strlen(gplotlabel)," V%d=%f ",Tvqresult[nres][k4],Tqresult[nres][k4]);
}
+ strcpy(gplotlabel+strlen(gplotlabel),")");
fprintf(ficgp,"\n#\n");
if(invalidvarcomb[k1]){
fprintf(ficgp,"#Combination (%d) ignored because no cases \n",k1);
@@ -6933,6 +7083,7 @@ set ter svg size 640, 480\nunset log y\n
}
fprintf(ficgp,"\nset out \"%s_%d-%d-%d.svg\" \n",subdirf2(optionfilefiname,"LIJT_"),cpt,k1,nres);
+ fprintf(ficgp,"set label \"Alive state %d %s\" at graph 0.98,0.5 center rotate font \"Helvetica,12\"\n",cpt,gplotlabel);
fprintf(ficgp,"set xlabel \"Age\" \nset ylabel \"Probability to be alive\" \n\
set ter svg size 640, 480\nunset log y\nplot [%.f:%.f] ", ageminpar, agemaxpar);
k=3;
@@ -6956,7 +7107,7 @@ set ter svg size 640, 480\nunset log y\n
else
fprintf(ficgp,"$%d) t\"l(%d,.)\" w l",k+l,cpt);
}
- fprintf(ficgp,"\nset out\n");
+ fprintf(ficgp,"\nset out; unset label;\n");
} /* end cpt state*/
} /* end covariate */
} /* end nres */
@@ -6968,7 +7119,7 @@ set ter svg size 640, 480\nunset log y\n
if(m != 1 && TKresult[nres]!= k1)
continue;
for (cpt=1; cpt<=nlstate ; cpt ++) { /* For each life state of arrival */
-
+ strcpy(gplotlabel,"(");
fprintf(ficgp,"\n#\n#\n#CV preval stable (period): 'pij' files, covariatecombination#=%d state=%d",k1, cpt);
for (k=1; k<=cptcoveff; k++){ /* For each covariate and each value */
lv= decodtabm(k1,k,cptcoveff); /* Should be the covariate number corresponding to k1 combination */
@@ -6977,10 +7128,13 @@ set ter svg size 640, 480\nunset log y\n
/* decodtabm(13,3,4)= 2 because h=13 k= 1 1 (2) 2 */
vlv= nbcode[Tvaraff[k]][lv];
fprintf(ficgp," V%d=%d ",Tvaraff[k],vlv);
+ sprintf(gplotlabel+strlen(gplotlabel)," V%d=%d ",Tvaraff[k],vlv);
}
for (k4=1; k4<= nsq; k4++){ /* For each selected (single) quantitative value */
fprintf(ficgp," V%d=%f ",Tvqresult[nres][k4],Tqresult[nres][k4]);
+ sprintf(gplotlabel+strlen(gplotlabel)," V%d=%f ",Tvqresult[nres][k4],Tqresult[nres][k4]);
}
+ strcpy(gplotlabel+strlen(gplotlabel),")");
fprintf(ficgp,"\n#\n");
if(invalidvarcomb[k1]){
fprintf(ficgp,"#Combination (%d) ignored because no cases \n",k1);
@@ -6988,6 +7142,7 @@ set ter svg size 640, 480\nunset log y\n
}
fprintf(ficgp,"\nset out \"%s_%d-%d-%d.svg\" \n",subdirf2(optionfilefiname,"P_"),cpt,k1,nres);
+ fprintf(ficgp,"set label \"Alive state %d %s\" at graph 0.98,0.5 center rotate font \"Helvetica,12\"\n",cpt,gplotlabel);
fprintf(ficgp,"set xlabel \"Age\" \nset ylabel \"Probability\" \n\
set ter svg size 640, 480\nunset log y\nplot [%.f:%.f] ", ageminpar, agemaxpar);
k=3; /* Offset */
@@ -7002,7 +7157,7 @@ set ter svg size 640, 480\nunset log y\n
fprintf(ficgp,"+$%d",k+l+j-1);
fprintf(ficgp,")) t \"prev(%d,%d)\" w l",i,cpt);
} /* nlstate */
- fprintf(ficgp,"\nset out\n");
+ fprintf(ficgp,"\nset out; unset label;\n");
} /* end cpt state*/
} /* end covariate */
@@ -7015,7 +7170,8 @@ set ter svg size 640, 480\nunset log y\n
if(m != 1 && TKresult[nres]!= k1)
continue;
for (cpt=1; cpt<=nlstate ; cpt ++) { /* For each life ending state */
- fprintf(ficgp,"\n#\n#\n#CV Back preval stable (period): 'pijb' files, covariatecombination#=%d state=%d",k1, cpt);
+ strcpy(gplotlabel,"(");
+ fprintf(ficgp,"\n#\n#\n#CV Back preval stable (period): 'pijb' files, covariatecombination#=%d state=%d",k1, cpt);
for (k=1; k<=cptcoveff; k++){ /* For each covariate and each value */
lv= decodtabm(k1,k,cptcoveff); /* Should be the covariate number corresponding to k1 combination */
/* decodtabm(1,1,4) = 1 because h=1 k= (1) 1 1 1 */
@@ -7023,10 +7179,13 @@ set ter svg size 640, 480\nunset log y\n
/* decodtabm(13,3,4)= 2 because h=13 k= 1 1 (2) 2 */
vlv= nbcode[Tvaraff[k]][lv];
fprintf(ficgp," V%d=%d ",Tvaraff[k],vlv);
+ sprintf(gplotlabel+strlen(gplotlabel)," V%d=%d ",Tvaraff[k],vlv);
}
for (k4=1; k4<= nsq; k4++){ /* For each selected (single) quantitative value */
fprintf(ficgp," V%d=%f ",Tvqresult[nres][k4],Tqresult[nres][k4]);
+ sprintf(gplotlabel+strlen(gplotlabel)," V%d=%f ",Tvqresult[nres][k4],Tqresult[nres][k4]);
}
+ strcpy(gplotlabel+strlen(gplotlabel),")");
fprintf(ficgp,"\n#\n");
if(invalidvarcomb[k1]){
fprintf(ficgp,"#Combination (%d) ignored because no cases \n",k1);
@@ -7034,6 +7193,7 @@ set ter svg size 640, 480\nunset log y\n
}
fprintf(ficgp,"\nset out \"%s_%d-%d-%d.svg\" \n",subdirf2(optionfilefiname,"PB_"),cpt,k1,nres);
+ fprintf(ficgp,"set label \"Ending alive state %d %s\" at graph 0.98,0.5 center rotate font \"Helvetica,12\"\n",cpt,gplotlabel);
fprintf(ficgp,"set xlabel \"Age\" \nset ylabel \"Probability\" \n\
set ter svg size 640, 480\nunset log y\nplot [%.f:%.f] ", ageminpar, agemaxpar);
k=3; /* Offset */
@@ -7052,7 +7212,7 @@ set ter svg size 640, 480\nunset log y\n
/* /\* fprintf(ficgp,"+$%d",k+l+j-1); *\/ */
fprintf(ficgp,") t \"bprev(%d,%d)\" w l",i,cpt);
} /* nlstate */
- fprintf(ficgp,"\nset out\n");
+ fprintf(ficgp,"\nset out; unset label;\n");
} /* end cpt state*/
} /* end covariate */
} /* End if backcast */
@@ -7066,6 +7226,7 @@ set ter svg size 640, 480\nunset log y\n
if(m != 1 && TKresult[nres]!= k1)
continue;
for (cpt=1; cpt<=nlstate ; cpt ++) { /* For each life state */
+ strcpy(gplotlabel,"(");
fprintf(ficgp,"\n#\n#\n#Projection of prevalence to stable (period): 'PROJ_' files, covariatecombination#=%d state=%d",k1, cpt);
for (k=1; k<=cptcoveff; k++){ /* For each correspondig covariate value */
lv= decodtabm(k1,k,cptcoveff); /* Should be the covariate value corresponding to k1 combination and kth covariate */
@@ -7074,10 +7235,13 @@ set ter svg size 640, 480\nunset log y\n
/* decodtabm(13,3,4)= 2 because h=13 k= 1 1 (2) 2 */
vlv= nbcode[Tvaraff[k]][lv];
fprintf(ficgp," V%d=%d ",Tvaraff[k],vlv);
+ sprintf(gplotlabel+strlen(gplotlabel)," V%d=%d ",Tvaraff[k],vlv);
}
for (k4=1; k4<= nsq; k4++){ /* For each selected (single) quantitative value */
fprintf(ficgp," V%d=%f ",Tvqresult[nres][k4],Tqresult[nres][k4]);
+ sprintf(gplotlabel+strlen(gplotlabel)," V%d=%f ",Tvqresult[nres][k4],Tqresult[nres][k4]);
}
+ strcpy(gplotlabel+strlen(gplotlabel),")");
fprintf(ficgp,"\n#\n");
if(invalidvarcomb[k1]){
fprintf(ficgp,"#Combination (%d) ignored because no cases \n",k1);
@@ -7086,6 +7250,7 @@ set ter svg size 640, 480\nunset log y\n
fprintf(ficgp,"# hpijx=probability over h years, hp.jx is weighted by observed prev\n ");
fprintf(ficgp,"\nset out \"%s_%d-%d-%d.svg\" \n",subdirf2(optionfilefiname,"PROJ_"),cpt,k1,nres);
+ fprintf(ficgp,"set label \"Alive state %d %s\" at graph 0.98,0.5 center rotate font \"Helvetica,12\"\n",cpt,gplotlabel);
fprintf(ficgp,"set xlabel \"Age\" \nset ylabel \"Prevalence\" \n\
set ter svg size 640, 480\nunset log y\nplot [%.f:%.f] ", ageminpar, agemaxpar);
for (i=1; i<= nlstate+1 ; i ++){ /* nlstate +1 p11 p21 p.1 */
@@ -7148,7 +7313,7 @@ set ter svg size 640, 480\nunset log y\n
}
} /* end if covariate */
} /* nlstate */
- fprintf(ficgp,"\nset out\n");
+ fprintf(ficgp,"\nset out; unset label;\n");
} /* end cpt state*/
} /* end covariate */
} /* End if prevfcast */
@@ -7191,17 +7356,31 @@ set ter svg size 640, 480\nunset log y\n
fprintf(ficgp,"#Number of graphics: first is logit, 2nd is probabilities, third is incidences per year\n");
fprintf(ficgp,"#model=%s \n",model);
fprintf(ficgp,"# Type of graphic ng=%d\n",ng);
- fprintf(ficgp,"# jk=1 to 2^%d=%d\n",cptcoveff,m);/* to be checked */
- for(jk=1; jk <=m; jk++) /* For each combination of covariate */
+ fprintf(ficgp,"# k1=1 to 2^%d=%d\n",cptcoveff,m);/* to be checked */
+ for(k1=1; k1 <=m; k1++) /* For each combination of covariate */
for(nres=1; nres <= nresult; nres++){ /* For each resultline */
- if(m != 1 && TKresult[nres]!= jk)
+ if(m != 1 && TKresult[nres]!= k1)
continue;
- fprintf(ficgp,"# Combination of dummy jk=%d and ",jk);
+ fprintf(ficgp,"\n\n# Combination of dummy k1=%d which is ",k1);
+ strcpy(gplotlabel,"(");
+ sprintf(gplotlabel+strlen(gplotlabel)," Dummy combination %d ",k1);
+ for (k=1; k<=cptcoveff; k++){ /* For each correspondig covariate value */
+ lv= decodtabm(k1,k,cptcoveff); /* Should be the covariate value corresponding to k1 combination and kth covariate */
+ /* decodtabm(1,1,4) = 1 because h=1 k= (1) 1 1 1 */
+ /* decodtabm(1,2,4) = 1 because h=1 k= 1 (1) 1 1 */
+ /* decodtabm(13,3,4)= 2 because h=13 k= 1 1 (2) 2 */
+ vlv= nbcode[Tvaraff[k]][lv];
+ fprintf(ficgp," V%d=%d ",Tvaraff[k],vlv);
+ sprintf(gplotlabel+strlen(gplotlabel)," V%d=%d ",Tvaraff[k],vlv);
+ }
for (k4=1; k4<= nsq; k4++){ /* For each selected (single) quantitative value */
fprintf(ficgp," V%d=%f ",Tvqresult[nres][k4],Tqresult[nres][k4]);
+ sprintf(gplotlabel+strlen(gplotlabel)," V%d=%f ",Tvqresult[nres][k4],Tqresult[nres][k4]);
}
+ strcpy(gplotlabel+strlen(gplotlabel),")");
fprintf(ficgp,"\n#\n");
- fprintf(ficgp,"\nset out \"%s_%d-%d-%d.svg\" ",subdirf2(optionfilefiname,"PE_"),jk,ng,nres);
+ fprintf(ficgp,"\nset out \"%s_%d-%d-%d.svg\" ",subdirf2(optionfilefiname,"PE_"),k1,ng,nres);
+ fprintf(ficgp,"\nset label \"%s\" at graph 0.98,0.5 center rotate font \"Helvetica,12\"\n",gplotlabel);
fprintf(ficgp,"\nset ter svg size 640, 480 ");
if (ng==1){
fprintf(ficgp,"\nset ylabel \"Value of the logit of the model\"\n"); /* exp(a12+b12*x) could be nice */
@@ -7251,7 +7430,7 @@ set ter svg size 640, 480\nunset log y\n
fprintf(ficgp,"+p%d*%d*x",i+j+2+nagesqr-1,Tinvresult[nres][Tvar[j]]);;
}else{ /* quantitative */
fprintf(ficgp,"+p%d*%f*x",i+j+2+nagesqr-1,Tqinvresult[nres][Tvar[j]]); /* Tqinvresult in decoderesult */
- /* fprintf(ficgp,"+p%d*%d*x",i+j+nagesqr-1,nbcode[Tvar[j-2]][codtabm(jk,Tvar[j-2])]); */
+ /* fprintf(ficgp,"+p%d*%d*x",i+j+nagesqr-1,nbcode[Tvar[j-2]][codtabm(k1,Tvar[j-2])]); */
}
ij++;
}
@@ -7260,10 +7439,10 @@ set ter svg size 640, 480\nunset log y\n
if(ijp <=cptcovprod) { /* Product */
if(DummyV[Tvard[ijp][1]]==0){/* Vn is dummy */
if(DummyV[Tvard[ijp][2]]==0){/* Vn and Vm are dummy */
- /* fprintf(ficgp,"+p%d*%d*%d",i+j+2+nagesqr-1,nbcode[Tvard[ijp][1]][codtabm(jk,j)],nbcode[Tvard[ijp][2]][codtabm(jk,j)]); */
+ /* fprintf(ficgp,"+p%d*%d*%d",i+j+2+nagesqr-1,nbcode[Tvard[ijp][1]][codtabm(k1,j)],nbcode[Tvard[ijp][2]][codtabm(k1,j)]); */
fprintf(ficgp,"+p%d*%d*%d",i+j+2+nagesqr-1,Tinvresult[nres][Tvard[ijp][1]],Tinvresult[nres][Tvard[ijp][2]]);
}else{ /* Vn is dummy and Vm is quanti */
- /* fprintf(ficgp,"+p%d*%d*%f",i+j+2+nagesqr-1,nbcode[Tvard[ijp][1]][codtabm(jk,j)],Tqinvresult[nres][Tvard[ijp][2]]); */
+ /* fprintf(ficgp,"+p%d*%d*%f",i+j+2+nagesqr-1,nbcode[Tvard[ijp][1]][codtabm(k1,j)],Tqinvresult[nres][Tvard[ijp][2]]); */
fprintf(ficgp,"+p%d*%d*%f",i+j+2+nagesqr-1,Tinvresult[nres][Tvard[ijp][1]],Tqinvresult[nres][Tvard[ijp][2]]);
}
}else{ /* Vn*Vm Vn is quanti */
@@ -7276,12 +7455,12 @@ set ter svg size 640, 480\nunset log y\n
ijp++;
}
} else{ /* simple covariate */
- /* fprintf(ficgp,"+p%d*%d",i+j+2+nagesqr-1,nbcode[Tvar[j]][codtabm(jk,j)]); /\* Valgrind bug nbcode *\/ */
+ /* fprintf(ficgp,"+p%d*%d",i+j+2+nagesqr-1,nbcode[Tvar[j]][codtabm(k1,j)]); /\* Valgrind bug nbcode *\/ */
if(Dummy[j]==0){
fprintf(ficgp,"+p%d*%d",i+j+2+nagesqr-1,Tinvresult[nres][Tvar[j]]); /* */
}else{ /* quantitative */
fprintf(ficgp,"+p%d*%f",i+j+2+nagesqr-1,Tqinvresult[nres][Tvar[j]]); /* */
- /* fprintf(ficgp,"+p%d*%d*x",i+j+nagesqr-1,nbcode[Tvar[j-2]][codtabm(jk,Tvar[j-2])]); */
+ /* fprintf(ficgp,"+p%d*%d*x",i+j+nagesqr-1,nbcode[Tvar[j-2]][codtabm(k1,Tvar[j-2])]); */
}
} /* end simple */
} /* end j */
@@ -7294,23 +7473,23 @@ set ter svg size 640, 480\nunset log y\n
if(ng != 1){
fprintf(ficgp,")/(1");
- for(k1=1; k1 <=nlstate; k1++){
+ for(cpt=1; cpt <=nlstate; cpt++){
if(nagesqr==0)
- fprintf(ficgp,"+exp(p%d+p%d*x",k3+(k1-1)*ncovmodel,k3+(k1-1)*ncovmodel+1);
+ fprintf(ficgp,"+exp(p%d+p%d*x",k3+(cpt-1)*ncovmodel,k3+(cpt-1)*ncovmodel+1);
else /* nagesqr =1 */
- fprintf(ficgp,"+exp(p%d+p%d*x+p%d*x*x",k3+(k1-1)*ncovmodel,k3+(k1-1)*ncovmodel+1,k3+(k1-1)*ncovmodel+1+nagesqr);
+ fprintf(ficgp,"+exp(p%d+p%d*x+p%d*x*x",k3+(cpt-1)*ncovmodel,k3+(cpt-1)*ncovmodel+1,k3+(cpt-1)*ncovmodel+1+nagesqr);
ij=1;
for(j=3; j <=ncovmodel-nagesqr; j++){
if((j-2)==Tage[ij]) { /* Bug valgrind */
if(ij <=cptcovage) { /* Bug valgrind */
- fprintf(ficgp,"+p%d*%d*x",k3+(k1-1)*ncovmodel+1+j-2+nagesqr,nbcode[Tvar[j-2]][codtabm(jk,j-2)]);
- /* fprintf(ficgp,"+p%d*%d*x",k3+(k1-1)*ncovmodel+1+j-2+nagesqr,nbcode[Tvar[j-2]][codtabm(jk,Tvar[j-2])]); */
+ fprintf(ficgp,"+p%d*%d*x",k3+(cpt-1)*ncovmodel+1+j-2+nagesqr,nbcode[Tvar[j-2]][codtabm(k1,j-2)]);
+ /* fprintf(ficgp,"+p%d*%d*x",k3+(cpt-1)*ncovmodel+1+j-2+nagesqr,nbcode[Tvar[j-2]][codtabm(k1,Tvar[j-2])]); */
ij++;
}
}
else
- fprintf(ficgp,"+p%d*%d",k3+(k1-1)*ncovmodel+1+j-2+nagesqr,nbcode[Tvar[j-2]][codtabm(jk,j-2)]);/* Valgrind bug nbcode */
+ fprintf(ficgp,"+p%d*%d",k3+(cpt-1)*ncovmodel+1+j-2+nagesqr,nbcode[Tvar[j-2]][codtabm(k1,j-2)]);/* Valgrind bug nbcode */
}
fprintf(ficgp,")");
}
@@ -7330,8 +7509,8 @@ set ter svg size 640, 480\nunset log y\n
i=i+ncovmodel;
} /* end k */
} /* end k2 */
- fprintf(ficgp,"\n set out\n");
- } /* end jk */
+ fprintf(ficgp,"\n set out; unset label;\n");
+ } /* end k1 */
} /* end ng */
/* avoid: */
fflush(ficgp);
@@ -9737,7 +9916,7 @@ int hPijx(double *p, int bage, int fage)
fprintf(ficrespijb," V%d=%f ",Tvqresult[nres][j],Tqresult[nres][j]);
}
fprintf(ficrespijb,"******\n");
- if(invalidvarcomb[k]){
+ if(invalidvarcomb[k]){ /* Is it necessary here? */
fprintf(ficrespijb,"\n#Combination (%d) ignored because no cases \n",k);
continue;
}