version 1.27, 2002/02/28 17:49:07
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version 1.29, 2002/03/06 19:02:50
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Line 1185 void freqsummary(char fileres[], int ag
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Line 1185 void freqsummary(char fileres[], int ag
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double pos, k2, dateintsum=0,k2cpt=0;
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double pos, k2, dateintsum=0,k2cpt=0;
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FILE *ficresp;
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FILE *ficresp;
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char fileresp[FILENAMELENGTH];
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char fileresp[FILENAMELENGTH];
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pp=vector(1,nlstate);
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pp=vector(1,nlstate);
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probs= ma3x(1,AGESUP,1,NCOVMAX, 1,NCOVMAX);
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probs= ma3x(1,AGESUP,1,NCOVMAX, 1,NCOVMAX);
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strcpy(fileresp,"p");
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strcpy(fileresp,"p");
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Line 1307 void freqsummary(char fileres[], int ag
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Line 1307 void freqsummary(char fileres[], int ag
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}
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}
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/************ Prevalence ********************/
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/************ Prevalence ********************/
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void prevalence(int agemin, int agemax, int **s, double **agev, int nlstate, int imx, int *Tvar, int **nbcode, int *ncodemax,double **mint,double **anint, double dateprev1,double dateprev2, double calagedate)
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void prevalence(int agemin, float agemax, int **s, double **agev, int nlstate, int imx, int *Tvar, int **nbcode, int *ncodemax,double **mint,double **anint, double dateprev1,double dateprev2, double calagedate)
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{ /* Some frequencies */
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{ /* Some frequencies */
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int i, m, jk, k1, i1, j1, bool, z1,z2,j;
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int i, m, jk, k1, i1, j1, bool, z1,z2,j;
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Line 1332 void prevalence(int agemin, int agemax,
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Line 1332 void prevalence(int agemin, int agemax,
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for (jk=-1; jk<=nlstate+ndeath; jk++)
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for (jk=-1; jk<=nlstate+ndeath; jk++)
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for(m=agemin; m <= agemax+3; m++)
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for(m=agemin; m <= agemax+3; m++)
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freq[i][jk][m]=0;
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freq[i][jk][m]=0;
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for (i=1; i<=imx; i++) {
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for (i=1; i<=imx; i++) {
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bool=1;
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bool=1;
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if (cptcovn>0) {
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if (cptcovn>0) {
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for (z1=1; z1<=cptcoveff; z1++)
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for (z1=1; z1<=cptcoveff; z1++)
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if (covar[Tvaraff[z1]][i]!= nbcode[Tvaraff[z1]][codtab[j1][z1]])
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if (covar[Tvaraff[z1]][i]!= nbcode[Tvaraff[z1]][codtab[j1][z1]])
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bool=0;
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bool=0;
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}
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}
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if (bool==1) {
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if (bool==1) {
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for(m=firstpass; m<=lastpass; m++){
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for(m=firstpass; m<=lastpass; m++){
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k2=anint[m][i]+(mint[m][i]/12.);
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k2=anint[m][i]+(mint[m][i]/12.);
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Line 1347 void prevalence(int agemin, int agemax,
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Line 1347 void prevalence(int agemin, int agemax,
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if(agev[m][i]==0) agev[m][i]=agemax+1;
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if(agev[m][i]==0) agev[m][i]=agemax+1;
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if(agev[m][i]==1) agev[m][i]=agemax+2;
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if(agev[m][i]==1) agev[m][i]=agemax+2;
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freq[s[m][i]][s[m+1][i]][(int)(agev[m][i]+1-((int)calagedate %12)/12.)] += weight[i];
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freq[s[m][i]][s[m+1][i]][(int)(agev[m][i]+1-((int)calagedate %12)/12.)] += weight[i];
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freq[s[m][i]][s[m+1][i]][(int)(agemax+3+1)] += weight[i];
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/* freq[s[m][i]][s[m+1][i]][(int)(agemax+3+1)] += weight[i]; */
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}
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}
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}
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}
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}
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}
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}
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}
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for(i=(int)agemin; i <= (int)agemax+3; i++){
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for(i=(int)agemin; i <= (int)agemax+3; i++){
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for(jk=1; jk <=nlstate ; jk++){
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for(jk=1; jk <=nlstate ; jk++){
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for(m=-1, pp[jk]=0; m <=nlstate+ndeath ; m++)
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for(m=-1, pp[jk]=0; m <=nlstate+ndeath ; m++)
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Line 1557 void evsij(char fileres[], double ***eij
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Line 1556 void evsij(char fileres[], double ***eij
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for(i=1; i<=nlstate;i++)
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for(i=1; i<=nlstate;i++)
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for(j=1; j<=nlstate;j++)
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for(j=1; j<=nlstate;j++)
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for (h=0, eij[i][j][(int)age]=0; h<=nhstepm; h++){
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for (h=0, eij[i][j][(int)age]=0; h<=nhstepm-1; h++){
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eij[i][j][(int)age] +=p3mat[i][j][h];
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eij[i][j][(int)age] +=(p3mat[i][j][h]+p3mat[i][j][h+1])/2.0;
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}
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}
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hf=1;
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hf=1;
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if (stepm >= YEARM) hf=stepm/YEARM;
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if (stepm >= YEARM) hf=stepm/YEARM;
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fprintf(ficreseij,"%.0f",age );
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for(i=1; i<=nlstate;i++)
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for(j=1; j<=nlstate;j++){
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if (j==i) eij[i][j][(int)age]= (eij[i][j][(int)age]-0.5*stepm/12./hf);
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}
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fprintf(ficreseij,"%3.0f",age );
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for(i=1; i<=nlstate;i++)
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for(i=1; i<=nlstate;i++)
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for(j=1; j<=nlstate;j++){
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for(j=1; j<=nlstate;j++){
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fprintf(ficreseij," %.4f", hf*eij[i][j][(int)age]);
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fprintf(ficreseij," %9.4f", hf*eij[i][j][(int)age]);
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}
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}
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fprintf(ficreseij,"\n");
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fprintf(ficreseij,"\n");
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free_ma3x(p3mat,1,nlstate+ndeath,1, nlstate+ndeath, 0,nhstepm);
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free_ma3x(p3mat,1,nlstate+ndeath,1, nlstate+ndeath, 0,nhstepm);
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Line 1883 fclose(ficresprob);
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Line 1888 fclose(ficresprob);
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}
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}
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/******************* Printing html file ***********/
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/******************* Printing html file ***********/
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void printinghtml(char fileres[], char title[], char datafile[], int firstpass, int lastpass, int stepm, int weightopt, char model[],int imx,int jmin, int jmax, double jmeanint,char optionfile[],char optionfilehtm[] ){
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void printinghtml(char fileres[], char title[], char datafile[], int firstpass, int lastpass, int stepm, int weightopt, char model[],int imx,int jmin, int jmax, double jmeanint,char optionfile[],char optionfilehtm[],char rfileres[] ){
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int jj1, k1, i1, cpt;
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int jj1, k1, i1, cpt;
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FILE *fichtm;
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FILE *fichtm;
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/*char optionfilehtm[FILENAMELENGTH];*/
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/*char optionfilehtm[FILENAMELENGTH];*/
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Line 1894 void printinghtml(char fileres[], char t
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Line 1899 void printinghtml(char fileres[], char t
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printf("Problem with %s \n",optionfilehtm), exit(0);
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printf("Problem with %s \n",optionfilehtm), exit(0);
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}
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}
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fprintf(fichtm,"<body><ul> <font size=\"6\">Imach, Version 0.7 </font> <hr size=\"2\" color=\"#EC5E5E\">
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fprintf(fichtm,"<body><ul> <font size=\"6\">Imach, Version 0.71 </font> <hr size=\"2\" color=\"#EC5E5E\">
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Title=%s <br>Datafile=%s Firstpass=%d Lastpass=%d Stepm=%d Weight=%d Model=%s<br>
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Title=%s <br>Datafile=%s Firstpass=%d Lastpass=%d Stepm=%d Weight=%d Model=%s<br>
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Total number of observations=%d <br>
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Total number of observations=%d <br>
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Line 1910 Interval (in months) between two waves:
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Line 1915 Interval (in months) between two waves:
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- Variances of life expectancies by age and initial health status: <a href=\"v%s\">v%s</a><br>
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- Variances of life expectancies by age and initial health status: <a href=\"v%s\">v%s</a><br>
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- Health expectancies with their variances: <a href=\"t%s\">t%s</a> <br>
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- Health expectancies with their variances: <a href=\"t%s\">t%s</a> <br>
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- Standard deviation of stationary prevalences: <a href=\"vpl%s\">vpl%s</a> <br>
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- Standard deviation of stationary prevalences: <a href=\"vpl%s\">vpl%s</a> <br>
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- Prevalences and population forecasting: <a href=\"f%s\">f%s</a> <br>
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- Prevalences forecasting: <a href=\"f%s\">f%s</a> <br>
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<br>",title,datafile,firstpass,lastpass,stepm, weightopt,model,imx,jmin,jmax,jmean,fileres,fileres,fileres,fileres,fileres,fileres,fileres,fileres,fileres,fileres,fileres,fileres,fileres,fileres,fileres,fileres,fileres,fileres,fileres,fileres);
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- Population forecasting (if popforecast=1): <a href=\"pop%s\">pop%s</a> <br>
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<br>",title,datafile,firstpass,lastpass,stepm, weightopt,model,imx,jmin,jmax,jmean,fileres,fileres,rfileres,rfileres,fileres,fileres,fileres,fileres,fileres,fileres,fileres,fileres,fileres,fileres,fileres,fileres,fileres,fileres,fileres,fileres,fileres,fileres);
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fprintf(fichtm," <li>Graphs</li><p>");
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fprintf(fichtm," <li>Graphs</li><p>");
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Line 1953 fclose(fichtm);
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Line 1959 fclose(fichtm);
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}
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}
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/******************* Gnuplot file **************/
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/******************* Gnuplot file **************/
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void printinggnuplot(char fileres[],char optionfilefiname[],char optionfile[],char optionfilegnuplot[], double agemin, double agemax, double fage , char pathc[], double p[]){
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void printinggnuplot(char fileres[],char optionfilefiname[],char optionfile[],char optionfilegnuplot[], double agemin, double agemaxpar, double fage , char pathc[], double p[]){
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int m,cpt,k1,i,k,j,jk,k2,k3,ij,l;
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int m,cpt,k1,i,k,j,jk,k2,k3,ij,l;
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Line 2048 fprintf(ficgp,"\nset out \"v%s%d%d.gif\"
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Line 2054 fprintf(ficgp,"\nset out \"v%s%d%d.gif\"
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for (k1=1; k1<= m ; k1 ++) {
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for (k1=1; k1<= m ; k1 ++) {
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for (cpt=1; cpt<nlstate ; cpt ++) {
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for (cpt=1; cpt<nlstate ; cpt ++) {
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k=3;
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k=3;
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fprintf(ficgp,"set xlabel \"Age\" \nset ylabel \"Probability\" \nset ter gif small size 400,300\nplot [%.f:%.f] \"pij%s\" u ($1==%d ? ($3):1/0):($%d/($%d",agemin,agemax,fileres,k1,k+cpt+1,k+1);
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fprintf(ficgp,"set xlabel \"Age\" \nset ylabel \"Probability\" \nset ter gif small size 400,300\nplot [%.f:%.f] \"pij%s\" u ($1==%d ? ($3):1/0):($%d/($%d",agemin,agemaxpar,fileres,k1,k+cpt+1,k+1);
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for (i=1; i< nlstate ; i ++)
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for (i=1; i< nlstate ; i ++)
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fprintf(ficgp,"+$%d",k+i+1);
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fprintf(ficgp,"+$%d",k+i+1);
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Line 2080 fprintf(ficgp,"\nset out \"v%s%d%d.gif\"
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Line 2086 fprintf(ficgp,"\nset out \"v%s%d%d.gif\"
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}
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}
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for(jk=1; jk <=m; jk++) {
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for(jk=1; jk <=m; jk++) {
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fprintf(ficgp,"\nset ter gif small size 400,300\nset log y\nplot [%.f:%.f] ",agemin,agemax);
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fprintf(ficgp,"\nset ter gif small size 400,300\nset log y\nplot [%.f:%.f] ",agemin,agemaxpar);
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i=1;
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i=1;
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for(k2=1; k2<=nlstate; k2++) {
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for(k2=1; k2<=nlstate; k2++) {
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k3=i;
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k3=i;
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Line 2159 prevforecast(char fileres[], double anpr
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Line 2165 prevforecast(char fileres[], double anpr
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agelim=AGESUP;
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agelim=AGESUP;
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calagedate=(anproj1+mproj1/12.+jproj1/365.-dateintmean)*YEARM;
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calagedate=(anproj1+mproj1/12.+jproj1/365.-dateintmean)*YEARM;
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prevalence(agemin, agemax, s, agev, nlstate, imx,Tvar,nbcode, ncodemax,mint,anint,dateprev1,dateprev2, calagedate);
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prevalence(agemin, agemax, s, agev, nlstate, imx,Tvar,nbcode, ncodemax,mint,anint,dateprev1,dateprev2, calagedate);
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strcpy(fileresf,"f");
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strcpy(fileresf,"f");
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strcat(fileresf,fileres);
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strcat(fileresf,fileres);
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Line 2210 calagedate=(anproj1+mproj1/12.+jproj1/36
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Line 2216 calagedate=(anproj1+mproj1/12.+jproj1/36
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for (cpt=0; cpt<=(anproj2-anproj1);cpt++) {
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for (cpt=0; cpt<=(anproj2-anproj1);cpt++) {
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fprintf(ficresf,"\n");
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fprintf(ficresf,"\n");
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fprintf(ficresf,"\n# Forecasting at date %.lf/%.lf/%.lf ",jproj1,mproj1,anproj1+cpt);
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fprintf(ficresf,"\n# Forecasting at date %.lf/%.lf/%.lf ",jproj1,mproj1,anproj1+cpt);
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for (agedeb=(fage-((int)calagedate %12/12.)); agedeb>=(agemin-((int)calagedate %12)/12.); agedeb--){
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for (agedeb=(fage-((int)calagedate %12/12.)); agedeb>=(agemin-((int)calagedate %12)/12.); agedeb--){
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nhstepm=(int) rint((agelim-agedeb)*YEARM/stepm);
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nhstepm=(int) rint((agelim-agedeb)*YEARM/stepm);
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nhstepm = nhstepm/hstepm;
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nhstepm = nhstepm/hstepm;
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Line 2250 calagedate=(anproj1+mproj1/12.+jproj1/36
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Line 2256 calagedate=(anproj1+mproj1/12.+jproj1/36
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fclose(ficresf);
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fclose(ficresf);
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}
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}
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/************** Forecasting ******************/
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/************** Forecasting ******************/
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populforecast(char fileres[], double anproj1,double mproj1,double jproj1,double agemin, double agemax,double dateprev1, double dateprev2, int mobilav, double agedeb, double fage, int popforecast, char popfile[], double anproj2,double p[], int i2){
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populforecast(char fileres[], double anpyram,double mpyram,double jpyram,double agemin, double agemax,double dateprev1, double dateprev2, int mobilav, double agedeb, double fage, int popforecast, char popfile[], double anpyram1,double p[], int i2){
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int cpt, stepsize, hstepm, nhstepm, j,k,c, cptcod, i,h;
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int cpt, stepsize, hstepm, nhstepm, j,k,c, cptcod, i,h;
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int *popage;
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int *popage;
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Line 2259 populforecast(char fileres[], double anp
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Line 2265 populforecast(char fileres[], double anp
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double ***p3mat,***tabpop,***tabpopprev;
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double ***p3mat,***tabpop,***tabpopprev;
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char filerespop[FILENAMELENGTH];
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char filerespop[FILENAMELENGTH];
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tabpop= ma3x(1, AGESUP,1,NCOVMAX, 1,NCOVMAX);
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tabpop= ma3x(1, AGESUP,1,NCOVMAX, 1,NCOVMAX);
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tabpopprev= ma3x(1, AGESUP,1,NCOVMAX, 1,NCOVMAX);
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tabpopprev= ma3x(1, AGESUP,1,NCOVMAX, 1,NCOVMAX);
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agelim=AGESUP;
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agelim=AGESUP;
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calagedate=(anproj1+mproj1/12.+jproj1/365.-dateintmean)*YEARM;
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calagedate=(anpyram+mpyram/12.+jpyram/365.-dateintmean)*YEARM;
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prevalence(agemin, agemax, s, agev, nlstate, imx,Tvar,nbcode, ncodemax,mint,anint,dateprev1,dateprev2, calagedate);
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prevalence(agemin, agemax, s, agev, nlstate, imx,Tvar,nbcode, ncodemax,mint,anint,dateprev1,dateprev2, calagedate);
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strcpy(filerespop,"pop");
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strcpy(filerespop,"pop");
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strcat(filerespop,fileres);
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strcat(filerespop,fileres);
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if((ficrespop=fopen(filerespop,"w"))==NULL) {
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if((ficrespop=fopen(filerespop,"w"))==NULL) {
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Line 2312 calagedate=(anproj1+mproj1/12.+jproj1/36
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Line 2318 calagedate=(anproj1+mproj1/12.+jproj1/36
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fprintf(ficrespop," V%d=%d ",Tvaraff[j],nbcode[Tvaraff[j]][codtab[k][j]]);
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fprintf(ficrespop," V%d=%d ",Tvaraff[j],nbcode[Tvaraff[j]][codtab[k][j]]);
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}
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}
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fprintf(ficrespop,"******\n");
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fprintf(ficrespop,"******\n");
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fprintf(ficrespop,"# StartingAge FinalAge");
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fprintf(ficrespop,"# Age");
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for(j=1; j<=nlstate+ndeath;j++) fprintf(ficrespop," P.%d",j);
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for(j=1; j<=nlstate+ndeath;j++) fprintf(ficrespop," P.%d",j);
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if (popforecast==1) fprintf(ficrespop," [Population]");
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if (popforecast==1) fprintf(ficrespop," [Population]");
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for (cpt=0; cpt<=0;cpt++) {
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for (cpt=0; cpt<=0;cpt++) {
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fprintf(ficrespop,"\n# Forecasting at date %.lf/%.lf/%.lf ",jproj1,mproj1,anproj1+cpt);
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fprintf(ficrespop,"\n\n# Forecasting at date %.lf/%.lf/%.lf ",jpyram,mpyram,anpyram+cpt);
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for (agedeb=(fage-((int)calagedate %12/12.)); agedeb>=(agemin-((int)calagedate %12)/12.); agedeb--){
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for (agedeb=(fage-((int)calagedate %12/12.)); agedeb>=(agemin-((int)calagedate %12)/12.); agedeb--){
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nhstepm=(int) rint((agelim-agedeb)*YEARM/stepm);
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nhstepm=(int) rint((agelim-agedeb)*YEARM/stepm);
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Line 2329 calagedate=(anproj1+mproj1/12.+jproj1/36
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Line 2335 calagedate=(anproj1+mproj1/12.+jproj1/36
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for (h=0; h<=nhstepm; h++){
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for (h=0; h<=nhstepm; h++){
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if (h==(int) (calagedate+YEARM*cpt)) {
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if (h==(int) (calagedate+YEARM*cpt)) {
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fprintf(ficrespop,"\n %.f ",agedeb+h*hstepm/YEARM*stepm);
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fprintf(ficrespop,"\n %3.f ",agedeb+h*hstepm/YEARM*stepm);
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}
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}
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for(j=1; j<=nlstate+ndeath;j++) {
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for(j=1; j<=nlstate+ndeath;j++) {
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kk1=0.;kk2=0;
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kk1=0.;kk2=0;
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Line 2349 calagedate=(anproj1+mproj1/12.+jproj1/36
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Line 2355 calagedate=(anproj1+mproj1/12.+jproj1/36
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for(i=1; i<=nlstate;i++){
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for(i=1; i<=nlstate;i++){
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kk1=0.;
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kk1=0.;
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for(j=1; j<=nlstate;j++){
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for(j=1; j<=nlstate;j++){
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kk1= kk1+Tabpop[(int)(agedeb)][j][cptcod];
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kk1= kk1+tabpop[(int)(agedeb)][j][cptcod];
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}
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}
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tabpopprev[(int)(agedeb)][i][cptcod]=tabpop[(int)(agedeb)][i][cptcod]/kk1*popeffectif[(int)(agedeb+(calagedate+12*cpt)*hstepm/YEARM*stepm-1)];
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tabpopprev[(int)(agedeb)][i][cptcod]=tabpop[(int)(agedeb)][i][cptcod]/kk1*popeffectif[(int)(agedeb+(calagedate+12*cpt)*hstepm/YEARM*stepm-1)];
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}
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}
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if (h==(int)(calagedate+12*cpt)) for(j=1; j<=nlstate;j++) fprintf(ficrespop," %.3f",tabpopprev[(int)(agedeb+1)][j][cptcod]);
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if (h==(int)(calagedate+12*cpt)) for(j=1; j<=nlstate;j++)
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fprintf(ficrespop," %15.2f",tabpopprev[(int)(agedeb+1)][j][cptcod]);
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}
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}
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free_ma3x(p3mat,1,nlstate+ndeath,1, nlstate+ndeath, 0,nhstepm);
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free_ma3x(p3mat,1,nlstate+ndeath,1, nlstate+ndeath, 0,nhstepm);
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}
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}
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Line 2362 if (h==(int)(calagedate+12*cpt)) for(j=1
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Line 2369 if (h==(int)(calagedate+12*cpt)) for(j=1
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/******/
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/******/
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for (cpt=1; cpt<=4;cpt++) {
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for (cpt=1; cpt<=(anpyram1-anpyram);cpt++) {
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fprintf(ficrespop,"\n# Forecasting at date %.lf/%.lf/%.lf ",jproj1,mproj1,anproj1+cpt);
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fprintf(ficrespop,"\n\n# Forecasting at date %.lf/%.lf/%.lf ",jpyram,mpyram,anpyram+cpt);
|
for (agedeb=(fage-((int)calagedate %12/12.)); agedeb>=(agemin-((int)calagedate %12)/12.); agedeb--){
|
for (agedeb=(fage-((int)calagedate %12/12.)); agedeb>=(agemin-((int)calagedate %12)/12.); agedeb--){
|
nhstepm=(int) rint((agelim-agedeb)*YEARM/stepm);
|
nhstepm=(int) rint((agelim-agedeb)*YEARM/stepm);
|
nhstepm = nhstepm/hstepm;
|
nhstepm = nhstepm/hstepm;
|
Line 2373 if (h==(int)(calagedate+12*cpt)) for(j=1
|
Line 2380 if (h==(int)(calagedate+12*cpt)) for(j=1
|
hpxij(p3mat,nhstepm,agedeb,hstepm,p,nlstate,stepm,oldm,savm, k);
|
hpxij(p3mat,nhstepm,agedeb,hstepm,p,nlstate,stepm,oldm,savm, k);
|
for (h=0; h<=nhstepm; h++){
|
for (h=0; h<=nhstepm; h++){
|
if (h==(int) (calagedate+YEARM*cpt)) {
|
if (h==(int) (calagedate+YEARM*cpt)) {
|
fprintf(ficresf,"\n %.f ",agedeb+h*hstepm/YEARM*stepm);
|
fprintf(ficresf,"\n %3.f ",agedeb+h*hstepm/YEARM*stepm);
|
}
|
}
|
for(j=1; j<=nlstate+ndeath;j++) {
|
for(j=1; j<=nlstate+ndeath;j++) {
|
kk1=0.;kk2=0;
|
kk1=0.;kk2=0;
|
for(i=1; i<=nlstate;i++) {
|
for(i=1; i<=nlstate;i++) {
|
kk1=kk1+p3mat[i][j][h]*tabpopprev[(int)agedeb+1][i][cptcod];
|
kk1=kk1+p3mat[i][j][h]*tabpopprev[(int)agedeb+1][i][cptcod];
|
}
|
}
|
if (h==(int)(calagedate+12*cpt)) fprintf(ficresf," %.3f", kk1);
|
if (h==(int)(calagedate+12*cpt)) fprintf(ficresf," %15.2f", kk1);
|
}
|
}
|
}
|
}
|
free_ma3x(p3mat,1,nlstate+ndeath,1, nlstate+ndeath, 0,nhstepm);
|
free_ma3x(p3mat,1,nlstate+ndeath,1, nlstate+ndeath, 0,nhstepm);
|
Line 2410 int main(int argc, char *argv[])
|
Line 2417 int main(int argc, char *argv[])
|
|
|
int i,j, k, n=MAXN,iter,m,size,cptcode, cptcod;
|
int i,j, k, n=MAXN,iter,m,size,cptcode, cptcod;
|
double agedeb, agefin,hf;
|
double agedeb, agefin,hf;
|
double agemin=1.e20, agemax=-1.e20;
|
double agemin=1.e20, agemaxpar=-1.e20, agemax=-1.e20;
|
|
|
double fret;
|
double fret;
|
double **xi,tmp,delta;
|
double **xi,tmp,delta;
|
Line 2423 int main(int argc, char *argv[])
|
Line 2430 int main(int argc, char *argv[])
|
char optionfile[FILENAMELENGTH], datafile[FILENAMELENGTH], filerespl[FILENAMELENGTH];
|
char optionfile[FILENAMELENGTH], datafile[FILENAMELENGTH], filerespl[FILENAMELENGTH];
|
char optionfilext[10], optionfilefiname[FILENAMELENGTH], optionfilehtm[FILENAMELENGTH], optionfilegnuplot[FILENAMELENGTH], plotcmd[FILENAMELENGTH];
|
char optionfilext[10], optionfilefiname[FILENAMELENGTH], optionfilehtm[FILENAMELENGTH], optionfilegnuplot[FILENAMELENGTH], plotcmd[FILENAMELENGTH];
|
|
|
char fileres[FILENAMELENGTH], filerespij[FILENAMELENGTH], filereso[FILENAMELENGTH];
|
char fileres[FILENAMELENGTH], filerespij[FILENAMELENGTH], filereso[FILENAMELENGTH], rfileres[FILENAMELENGTH];
|
|
|
char filerest[FILENAMELENGTH];
|
char filerest[FILENAMELENGTH];
|
char fileregp[FILENAMELENGTH];
|
char fileregp[FILENAMELENGTH];
|
Line 2437 int main(int argc, char *argv[])
|
Line 2444 int main(int argc, char *argv[])
|
int jnais,jdc,jint4,jint1,jint2,jint3,**outcome,**adl,*tab;
|
int jnais,jdc,jint4,jint1,jint2,jint3,**outcome,**adl,*tab;
|
int mobilav=0,popforecast=0;
|
int mobilav=0,popforecast=0;
|
int hstepm, nhstepm;
|
int hstepm, nhstepm;
|
double jprev1, mprev1,anprev1,jprev2, mprev2,anprev2;
|
double jprev1, mprev1,anprev1,jprev2, mprev2,anprev2,jpyram, mpyram,anpyram,jpyram1, mpyram1,anpyram1;
|
|
|
double bage, fage, age, agelim, agebase;
|
double bage, fage, age, agelim, agebase;
|
double ftolpl=FTOL;
|
double ftolpl=FTOL;
|
Line 2455 int main(int argc, char *argv[])
|
Line 2462 int main(int argc, char *argv[])
|
double dateprev1, dateprev2,jproj1,mproj1,anproj1,jproj2,mproj2,anproj2;
|
double dateprev1, dateprev2,jproj1,mproj1,anproj1,jproj2,mproj2,anproj2;
|
|
|
|
|
char version[80]="Imach version 0.7, February 2002, INED-EUROREVES ";
|
char version[80]="Imach version 0.71, February 2002, INED-EUROREVES ";
|
char *alph[]={"a","a","b","c","d","e"}, str[4];
|
char *alph[]={"a","a","b","c","d","e"}, str[4];
|
|
|
|
|
Line 2623 while((c=getc(ficpar))=='#' && c!= EOF){
|
Line 2630 while((c=getc(ficpar))=='#' && c!= EOF){
|
printf("\n");
|
printf("\n");
|
|
|
|
|
/*-------- data file ----------*/
|
/*-------- Rewriting paramater file ----------*/
|
if((ficres =fopen(fileres,"w"))==NULL) {
|
strcpy(rfileres,"r"); /* "Rparameterfile */
|
printf("Problem with resultfile: %s\n", fileres);goto end;
|
strcat(rfileres,optionfilefiname); /* Parameter file first name*/
|
|
strcat(rfileres,"."); /* */
|
|
strcat(rfileres,optionfilext); /* Other files have txt extension */
|
|
if((ficres =fopen(rfileres,"w"))==NULL) {
|
|
printf("Problem writing new parameter file: %s\n", fileres);goto end;
|
}
|
}
|
fprintf(ficres,"#%s\n",version);
|
fprintf(ficres,"#%s\n",version);
|
|
|
|
/*-------- data file ----------*/
|
if((fic=fopen(datafile,"r"))==NULL) {
|
if((fic=fopen(datafile,"r"))==NULL) {
|
printf("Problem with datafile: %s\n", datafile);goto end;
|
printf("Problem with datafile: %s\n", datafile);goto end;
|
}
|
}
|
Line 2901 printf("Total number of individuals= %d,
|
Line 2913 printf("Total number of individuals= %d,
|
}
|
}
|
|
|
/*--------- results files --------------*/
|
/*--------- results files --------------*/
|
fprintf(ficres,"title=%s datafile=%s lastobs=%d firstpass=%d lastpass=%d\nftol=%e stepm=%d ncov=%d nlstate=%d ndeath=%d maxwav=%d mle=%d weight=%d\nmodel=%s\n", title, datafile, lastobs, firstpass,lastpass,ftol, stepm, ncov, nlstate, ndeath, maxwav, mle,weightopt,model);
|
fprintf(ficres,"title=%s datafile=%s lastobs=%d firstpass=%d lastpass=%d\nftol=%e stepm=%d ncov=%d nlstate=%d ndeath=%d maxwav=%d mle= 0 weight=%d\nmodel=%s\n", title, datafile, lastobs, firstpass,lastpass,ftol, stepm, ncov, nlstate, ndeath, maxwav, weightopt,model);
|
|
|
|
|
jk=1;
|
jk=1;
|
Line 2973 printf("Total number of individuals= %d,
|
Line 2985 printf("Total number of individuals= %d,
|
}
|
}
|
ungetc(c,ficpar);
|
ungetc(c,ficpar);
|
|
|
fscanf(ficpar,"agemin=%lf agemax=%lf bage=%lf fage=%lf\n",&agemin,&agemax, &bage, &fage);
|
fscanf(ficpar,"agemin=%lf agemax=%lf bage=%lf fage=%lf\n",&agemin,&agemaxpar, &bage, &fage);
|
|
|
if (fage <= 2) {
|
if (fage <= 2) {
|
bage = agemin;
|
bage = agemin;
|
fage = agemax;
|
fage = agemaxpar;
|
}
|
}
|
|
|
fprintf(ficres,"# agemin agemax for life expectancy, bage fage (if mle==0 ie no data nor Max likelihood).\n");
|
fprintf(ficres,"# agemin agemax for life expectancy, bage fage (if mle==0 ie no data nor Max likelihood).\n");
|
fprintf(ficres,"agemin=%.0f agemax=%.0f bage=%.0f fage=%.0f\n",agemin,agemax,bage,fage);
|
fprintf(ficres,"agemin=%.0f agemax=%.0f bage=%.0f fage=%.0f\n",agemin,agemaxpar,bage,fage);
|
fprintf(ficparo,"agemin=%.0f agemax=%.0f bage=%.0f fage=%.0f\n",agemin,agemax,bage,fage);
|
fprintf(ficparo,"agemin=%.0f agemax=%.0f bage=%.0f fage=%.0f\n",agemin,agemaxpar,bage,fage);
|
|
|
while((c=getc(ficpar))=='#' && c!= EOF){
|
while((c=getc(ficpar))=='#' && c!= EOF){
|
ungetc(c,ficpar);
|
ungetc(c,ficpar);
|
Line 3009 printf("Total number of individuals= %d,
|
Line 3021 printf("Total number of individuals= %d,
|
dateprev2=anprev2+mprev2/12.+jprev2/365.;
|
dateprev2=anprev2+mprev2/12.+jprev2/365.;
|
|
|
fscanf(ficpar,"pop_based=%d\n",&popbased);
|
fscanf(ficpar,"pop_based=%d\n",&popbased);
|
fprintf(ficparo,"pop_based=%d\n",popbased);
|
fprintf(ficparo,"pop_based=%d\n",popbased);
|
fprintf(ficres,"pop_based=%d\n",popbased);
|
fprintf(ficres,"pop_based=%d\n",popbased);
|
|
|
while((c=getc(ficpar))=='#' && c!= EOF){
|
while((c=getc(ficpar))=='#' && c!= EOF){
|
ungetc(c,ficpar);
|
ungetc(c,ficpar);
|
fgets(line, MAXLINE, ficpar);
|
fgets(line, MAXLINE, ficpar);
|
Line 3019 printf("Total number of individuals= %d,
|
Line 3031 printf("Total number of individuals= %d,
|
fputs(line,ficparo);
|
fputs(line,ficparo);
|
}
|
}
|
ungetc(c,ficpar);
|
ungetc(c,ficpar);
|
fscanf(ficpar,"popforecast=%d popfile=%s starting-proj-date=%lf/%lf/%lf final-proj-date=%lf/%lf/%lf mov_average=%d\n",&popforecast,popfile,&jproj1,&mproj1,&anproj1,&jproj2,&mproj2,&anproj2,&mobilav);
|
|
fprintf(ficparo,"popforecast=%d popfile=%s starting-proj-date=%.lf/%.lf/%.lf final-proj-date=%.lf/%.lf/%.lf mov_average=%d\n",popforecast,popfile,jproj1,mproj1,anproj1,jproj2,mproj2,anproj2,mobilav);
|
fscanf(ficpar,"starting-proj-date=%lf/%lf/%lf final-proj-date=%lf/%lf/%lf mov_average=%d\n",&jproj1,&mproj1,&anproj1,&jproj2,&mproj2,&anproj2,&mobilav);
|
fprintf(ficres,"popforecast=%d popfile=%s starting-proj-date=%.lf/%.lf/%.lf final-proj-date=%.lf/%.lf/%.lf mov_average=%d\n",popforecast,popfile,jproj1,mproj1,anproj1,jproj2,mproj2,anproj2,mobilav);
|
fprintf(ficparo,"starting-proj-date=%.lf/%.lf/%.lf final-proj-date=%.lf/%.lf/%.lf mov_average=%d\n",jproj1,mproj1,anproj1,jproj2,mproj2,anproj2,mobilav);
|
|
fprintf(ficres,"starting-proj-date=%.lf/%.lf/%.lf final-proj-date=%.lf/%.lf/%.lf mov_average=%d\n",jproj1,mproj1,anproj1,jproj2,mproj2,anproj2,mobilav);
|
|
|
|
|
|
while((c=getc(ficpar))=='#' && c!= EOF){
|
|
ungetc(c,ficpar);
|
|
fgets(line, MAXLINE, ficpar);
|
|
puts(line);
|
|
fputs(line,ficparo);
|
|
}
|
|
ungetc(c,ficpar);
|
|
|
|
fscanf(ficpar,"popforecast=%d popfile=%s popfiledate=%lf/%lf/%lf last-popfiledate=%lf/%lf/%lf\n",&popforecast,popfile,&jpyram,&mpyram,&anpyram,&jpyram1,&mpyram1,&anpyram1);
|
|
fprintf(ficparo,"popforecast=%d popfile=%s popfiledate=%.lf/%.lf/%.lf last-popfiledate=%.lf/%.lf/%.lf\n",popforecast,popfile,jpyram,mpyram,anpyram,jpyram1,mpyram1,anpyram1);
|
|
fprintf(ficres,"popforecast=%d popfile=%s popfiledate=%.lf/%.lf/%.lf last-popfiledate=%.lf/%.lf/%.lf\n",popforecast,popfile,jpyram,mpyram,anpyram,jpyram1,mpyram1,anpyram1);
|
|
|
freqsummary(fileres, agemin, agemax, s, agev, nlstate, imx,Tvar,nbcode, ncodemax,mint,anint,dateprev1,dateprev2,jprev1, mprev1,anprev1,jprev2, mprev2,anprev2);
|
freqsummary(fileres, agemin, agemax, s, agev, nlstate, imx,Tvar,nbcode, ncodemax,mint,anint,dateprev1,dateprev2,jprev1, mprev1,anprev1,jprev2, mprev2,anprev2);
|
|
|
/*------------ gnuplot -------------*/
|
/*------------ gnuplot -------------*/
|
printinggnuplot(fileres,optionfilefiname,optionfile,optionfilegnuplot, agemin,agemax,fage, pathc,p);
|
printinggnuplot(fileres,optionfilefiname,optionfile,optionfilegnuplot, agemin,agemaxpar,fage, pathc,p);
|
|
|
/*------------ free_vector -------------*/
|
/*------------ free_vector -------------*/
|
chdir(path);
|
chdir(path);
|
Line 3039 fprintf(ficres,"popforecast=%d popfile=%
|
Line 3065 fprintf(ficres,"popforecast=%d popfile=%
|
/*free_matrix(covar,1,NCOVMAX,1,n);*/
|
/*free_matrix(covar,1,NCOVMAX,1,n);*/
|
fclose(ficparo);
|
fclose(ficparo);
|
fclose(ficres);
|
fclose(ficres);
|
|
|
/* Reads comments: lines beginning with '#' */
|
|
while((c=getc(ficpar))=='#' && c!= EOF){
|
|
ungetc(c,ficpar);
|
|
fgets(line, MAXLINE, ficpar);
|
|
puts(line);
|
|
fputs(line,ficparo);
|
|
}
|
|
ungetc(c,ficpar);
|
|
|
|
fscanf(ficpar,"agemin=%lf agemax=%lf bage=%lf fage=%lf\n",&agemin,&agemax, &bage, &fage);
|
|
printf("agemin=%.0f agemax=%.0f bage=%.0f fage=%.0f\n",agemin,agemax, bage, fage);
|
|
fprintf(ficparo,"agemin=%.0f agemax=%.0f bage=%.0f fage=%.0f\n",agemin,agemax,bage,fage);
|
|
/*--------- index.htm --------*/
|
/*--------- index.htm --------*/
|
|
|
printinghtml(fileres,title,datafile, firstpass, lastpass, stepm, weightopt,model,imx,jmin,jmax,jmean,optionfile,optionfilehtm);
|
printinghtml(fileres,title,datafile, firstpass, lastpass, stepm, weightopt,model,imx,jmin,jmax,jmean,optionfile,optionfilehtm,rfileres);
|
|
|
|
|
/*--------------- Prevalence limit --------------*/
|
/*--------------- Prevalence limit --------------*/
|
Line 3078 fprintf(ficres,"popforecast=%d popfile=%
|
Line 3092 fprintf(ficres,"popforecast=%d popfile=%
|
oldm=oldms; newm=newms; savm=savms; /* Keeps fixed addresses to free */
|
oldm=oldms; newm=newms; savm=savms; /* Keeps fixed addresses to free */
|
k=0;
|
k=0;
|
agebase=agemin;
|
agebase=agemin;
|
agelim=agemax;
|
agelim=agemaxpar;
|
ftolpl=1.e-10;
|
ftolpl=1.e-10;
|
i1=cptcoveff;
|
i1=cptcoveff;
|
if (cptcovn < 1){i1=1;}
|
if (cptcovn < 1){i1=1;}
|
Line 3159 fprintf(ficres,"popforecast=%d popfile=%
|
Line 3173 fprintf(ficres,"popforecast=%d popfile=%
|
/*---------- Forecasting ------------------*/
|
/*---------- Forecasting ------------------*/
|
if(stepm == 1) {
|
if(stepm == 1) {
|
prevforecast(fileres, anproj1,mproj1,jproj1, agemin,agemax, dateprev1, dateprev2,mobilav, agedeb, fage, popforecast, popfile, anproj2,p, i1);
|
prevforecast(fileres, anproj1,mproj1,jproj1, agemin,agemax, dateprev1, dateprev2,mobilav, agedeb, fage, popforecast, popfile, anproj2,p, i1);
|
populforecast(fileres, anproj1,mproj1,jproj1, agemin,agemax, dateprev1, dateprev2,mobilav, agedeb, fage, popforecast, popfile, anproj2,p, i1);
|
if (popforecast==1) populforecast(fileres, anpyram,mpyram,jpyram, agemin,agemax, dateprev1, dateprev2,mobilav, agedeb, fage, popforecast, popfile, anpyram1,p, i1);
|
free_matrix(mint,1,maxwav,1,n);
|
free_matrix(mint,1,maxwav,1,n);
|
free_matrix(anint,1,maxwav,1,n); free_imatrix(s,1,maxwav+1,1,n);
|
free_matrix(anint,1,maxwav,1,n); free_imatrix(s,1,maxwav+1,1,n);
|
free_vector(weight,1,n);}
|
free_vector(weight,1,n);}
|